| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046147
Identifier: 78046147
GI number: 78046147
Start: 671657
End: 672220
Strand: Reverse
Name: 78046147
Synonym: XCV0591
Alternate gene names: NA
Gene position: 672220-671657 (Counterclockwise)
Preceding gene: 78046148
Following gene: 78046142
Centisome position: 12.98
GC content: 59.22
Gene sequence:
>564_bases GTGATTGTGCGTTGCGCCAGCTCACGTAAGATGGGGTGCCGCAATCGCAGGTCAGGCAACAGCCGTTCCCCTGGACACGA TCAGCGAGACACCACCATGACAAACTCCCCGGACGACCGCCGCCATCGCCTCCTGAAAGCAACAGCGACGTTCGCGCTCT TGGCAGCCTCCCCTCTGGCCATCTGCTCAGGACAGCCTGAATATCCAACACCCCAGCAGCAAGTCGCTTCTGAAAGTCGG TTATTGGAAATCAGGGTGCGTGGGGATTTGAGTGGCAGAGACGTGGCGTTGCAGCTCGCCCCTGGCGAGCTGTCTCCTGG CTTCAAACTGCCTGACCGCAGAACCTATCGCGTCAAAGCCTCGATGATTCGGACAGATCCCAGGTTCGGACCGATCTATG CCTTGGTCCTGGCGGACGTGTCCGGCAATCCGCTCAACCAAATGAACATCGCGAGCAATACAACCGCGACGTTCGGCAAA CAGCGCGTCCAGGTGTATCTGCTCTCGCTGGAGCAAGCCAAACGCGTGCAACGTGCGTCCCAAGCGCAAGGGCATGATCG GTAA
Upstream 100 bases:
>100_bases CGCGCGCGCCATGCGCAAATTCCTCGAAGAGCACCATGGCGTGGACAAGGATTCGGTGCGCGCGAAGGGGTATTGGAAGG CGGCCCCGGATGCCTGAGCG
Downstream 100 bases:
>100_bases GCCTCTCATCATGGAGGTCCTCAGTGCCAGGGCCTCCTTCCGATGGATGGCACACGCGATGCGCTAGCTCACGATCCTGC AGGCCAGGAGCGCAACTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MIVRCASSRKMGCRNRRSGNSRSPGHDQRDTTMTNSPDDRRHRLLKATATFALLAASPLAICSGQPEYPTPQQQVASESR LLEIRVRGDLSGRDVALQLAPGELSPGFKLPDRRTYRVKASMIRTDPRFGPIYALVLADVSGNPLNQMNIASNTTATFGK QRVQVYLLSLEQAKRVQRASQAQGHDR
Sequences:
>Translated_187_residues MIVRCASSRKMGCRNRRSGNSRSPGHDQRDTTMTNSPDDRRHRLLKATATFALLAASPLAICSGQPEYPTPQQQVASESR LLEIRVRGDLSGRDVALQLAPGELSPGFKLPDRRTYRVKASMIRTDPRFGPIYALVLADVSGNPLNQMNIASNTTATFGK QRVQVYLLSLEQAKRVQRASQAQGHDR >Mature_187_residues MIVRCASSRKMGCRNRRSGNSRSPGHDQRDTTMTNSPDDRRHRLLKATATFALLAASPLAICSGQPEYPTPQQQVASESR LLEIRVRGDLSGRDVALQLAPGELSPGFKLPDRRTYRVKASMIRTDPRFGPIYALVLADVSGNPLNQMNIASNTTATFGK QRVQVYLLSLEQAKRVQRASQAQGHDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20688; Mature: 20688
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRCASSRKMGCRNRRSGNSRSPGHDQRDTTMTNSPDDRRHRLLKATATFALLAASPLA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH ICSGQPEYPTPQQQVASESRLLEIRVRGDLSGRDVALQLAPGELSPGFKLPDRRTYRVKA EECCCCCCCCCHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEE SMIRTDPRFGPIYALVLADVSGNPLNQMNIASNTTATFGKQRVQVYLLSLEQAKRVQRAS EEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCHHHHHHEEEEEEEEHHHHHHHHHHH QAQGHDR HHCCCCC >Mature Secondary Structure MIVRCASSRKMGCRNRRSGNSRSPGHDQRDTTMTNSPDDRRHRLLKATATFALLAASPLA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH ICSGQPEYPTPQQQVASESRLLEIRVRGDLSGRDVALQLAPGELSPGFKLPDRRTYRVKA EECCCCCCCCCHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEE SMIRTDPRFGPIYALVLADVSGNPLNQMNIASNTTATFGKQRVQVYLLSLEQAKRVQRAS EEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCHHHHHHEEEEEEEEHHHHHHHHHHH QAQGHDR HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA