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The map label for this gene is hrcV [H]

Identifier: 78045981

GI number: 78045981

Start: 474314

End: 476236

Strand: Reverse

Name: hrcV [H]

Synonym: XCV0425

Alternate gene names: 78045981

Gene position: 476236-474314 (Counterclockwise)

Preceding gene: 78045982

Following gene: 78045980

Centisome position: 9.2

GC content: 62.19

Gene sequence:

>1923_bases
GTGCGAGCGACAAGGTATTTCGCTTATAGCGGCGAAGTAGCCATCGCCGCCCTGGTAGTGGCGGTCATCGGGCTGATGAT
CCTGCCGCTGCCAACGCCCATGATCGATACGTTGCTGGGCATCAACATCACCCTGAGCGTGGTGCTGTTGATGGTCACGA
TGTATGTGCCCGACTCGATCTCGCTCTCGTCGTTTCCTTCCCTGCTGCTGTTCACCACGCTACTGCGGTTGTCATTGAAT
ATCGCCTCGACGAAGTCGATCCTGCTGCATGCCGAGGCGGGCCATATCATCGAGAGCTTCGGCGAGCTGGTGGTCGGTGG
CAATCTGGTGGTGGGCCTGGTGGTTTTCTTGATCATCACCACCGTGCAGTTCATCGTGATCGCAAAGGGTTCCGAACGCG
TTGCCGAGGTCGGTGCGCGCTTCACGTTGGACGCAATGCCCGGCAAGCAGATGAGTATCGATGCCGACCTGCGTGGCGGC
AACCTGACCGCAGATGAGGCACGCCGCAAACGCGCGCGGCTGGCCATGGAAAGCCAACTGCACGGCGGCATGGATGGCGC
CATGAAATTCGTCAAGGGTGATGCGATCGCCGGCCTGGTGATTACCATGGTCAACATCCTGGCCGGTATCGTGGTCGGCG
TGACCTACCACGGCATGACGGCCGGCGATGCCGCCAACCGCTTTGCGATCCTGTCGGTGGGCGATGCGATGGTGTCGCAG
ATCGCCTCACTGCTGATATCGGTGGCCGCCGGCGTCATGATCACCCGCGTGGCCAACGAGAACGAGACCAGGCTCAGCTC
GCTCGGGCTCGATATCGGCCGTCAGCTCACCAGCAATGCGCGGGCCCTGATGGCAGCGAGCGTGCTGCTGGCCTGCTTTG
CGTTCGTCCCCGGCTTTCCCGCCGTGCTGTTCCTGCTGCTGGCAGCGGCCGTCGGCGCCGGTGGCTATACGATCTGGCGC
AAGCAACGCGACATCAGCGGCACCGATCAGCGCAAGTTGCCTTCGGCGAGCCGTAAAGGTGCCAAAGGCGAGGCGCCACA
TATTCGCAAAAACGCCCCGGATTTCGCCTCACCCTTATCGATGCGGCTGTCGCCGCAGCTGGCCGCTCTGCTCGACCCCG
CGCGGCTGGATCAGGCGATCGAAAGCGAGCGGCGGCAATTGGTCGAATTGCTGGGCTTGCCGTTTCCCGGGATCGCGATA
TGGCAGACCGAGTCGCTGCAAGGCATGCAATACGAAGTGTTGATTCATGATGTCCCCGAGACACGCGCCGAACTGGAGAA
CACCGACGACATGCAGGCCGCACTGGCCCGGCAGGCCATCTCACCCCTGCATGCACGAGCGCACTTGTTCGTCGGCATCC
AGGAGACGCAGTGGATGCTGGAGCAGGTGGCCGTGGACTACCCCGGGCTGGTTGCGGAGGTCAACAAGGCGATGCCCGCC
CAGCGCATAGCCGATGTGTTGCGGCGCCTTCTGGAAGAAAGGATTCCGGTGCGCAATATCAAGAGCATTCTGGAAAGTCT
GGTGGTCTGGGGGCCGAAGGAAAAGGATCTTCTGATGTTGACCGAGTATGTGCGCTGCGATCTGGGCCGTTATCTGGCGC
ATACCGCAACCGCAGGCACCGGGCAGCTGCCCGCAGTGATGCTCGACCATGCTGTCGAACAACTGATCAGGCAATCGATT
CGCGCGACCGCGGCCGGCAATTTCCTGGCACTTCCGCCCGAGCAGGCGAACCAGCTTGTCGAACAGGTGGAACGCATCGT
CGGCGACCATGCGCAGCATCCGCTGGCGGTGGTCGCGTCGATGGACGTGCGCAGGTATGTGCGCCGCATGATCGAAGCAC
GGCTGACCTGGCTGCAGGTCTATTCGTTCCAGGAGCTGGGTTCGGAGGTGCAGCTGCAGCCGATCGGTAGAGTGGTGGTG
TGA

Upstream 100 bases:

>100_bases
AGCCACTGTTCGAAACGGTTGCGGTGGTGTTGCGCTGGGTCGATGAACTCGGTCGCGACCACGGCGACGGCGATGGAGCC
CTGCCATGCTAGGAGACCGC

Downstream 100 bases:

>100_bases
TGCGCAAGCCGCCCCTCCGCCATGTGCGCATCCTGCCGGTCAGCGGCGCACTGCAGCGGCCGGCGGCTCCAGCCACGCCG
GCCCGGTCGGCGCTGCGCTC

Product: HrcV protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLN
IASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGG
NLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ
IASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYTIWR
KQRDISGTDQRKLPSASRKGAKGEAPHIRKNAPDFASPLSMRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAI
WQTESLQGMQYEVLIHDVPETRAELENTDDMQAALARQAISPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPA
QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSI
RATAAGNFLALPPEQANQLVEQVERIVGDHAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV

Sequences:

>Translated_640_residues
MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLN
IASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGG
NLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ
IASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYTIWR
KQRDISGTDQRKLPSASRKGAKGEAPHIRKNAPDFASPLSMRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAI
WQTESLQGMQYEVLIHDVPETRAELENTDDMQAALARQAISPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPA
QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSI
RATAAGNFLALPPEQANQLVEQVERIVGDHAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
>Mature_640_residues
MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLN
IASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGG
NLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ
IASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYTIWR
KQRDISGTDQRKLPSASRKGAKGEAPHIRKNAPDFASPLSMRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAI
WQTESLQGMQYEVLIHDVPETRAELENTDDMQAALARQAISPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPA
QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSI
RATAAGNFLALPPEQANQLVEQVERIVGDHAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV

Specific function: Involved in the secretion of a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=685, Percent_Identity=33.2846715328467, Blast_Score=318, Evalue=5e-88,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 69336; Mature: 69336

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSI
CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCC
SLSSFPSLLLFTTLLRLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIIT
CHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLAMESQL
HHHHHHEECCCHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
HGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHH
IASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVLFLLLAAAVGAGGYTIWRKQRDISGTDQRKLPSASRKGAKGEAPHIRKNAPDFASPLS
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCHH
MRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAIWQTESLQGMQYEVLIHDVPE
HCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCH
TRAELENTDDMQAALARQAISPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCH
QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
GQLPAVMLDHAVEQLIRQSIRATAAGNFLALPPEQANQLVEQVERIVGDHAQHPLAVVAS
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSI
CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCC
SLSSFPSLLLFTTLLRLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIIT
CHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLAMESQL
HHHHHHEECCCHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
HGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHH
IASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVLFLLLAAAVGAGGYTIWRKQRDISGTDQRKLPSASRKGAKGEAPHIRKNAPDFASPLS
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCHH
MRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAIWQTESLQGMQYEVLIHDVPE
HCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCH
TRAELENTDDMQAALARQAISPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCH
QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
GQLPAVMLDHAVEQLIRQSIRATAAGNFLALPPEQANQLVEQVERIVGDHAQHPLAVVAS
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]