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The map label for this gene is hpaC

Identifier: 78045980

GI number: 78045980

Start: 473676

End: 474314

Strand: Reverse

Name: hpaC

Synonym: XCV0424

Alternate gene names: NA

Gene position: 474314-473676 (Counterclockwise)

Preceding gene: 78045981

Following gene: 78045979

Centisome position: 9.16

GC content: 65.73

Gene sequence:

>639_bases
ATGCGCAAGCCGCCCCTCCGCCATGTGCGCATCCTGCCGGTCAGCGGCGCACTGCAGCGGCCGGCGGCTCCAGCCACGCC
GGCCCGGTCGGCGCTGCGCTCCAGCTTCCTGCAACTGCGCCAGCGCTTGCGCAGCGCACAGCTCGCGCTTCCCTGCATGG
TGTTGCCACCGCAGTGCGACGAGGATCGGCCGGGGCCTGATGCCGAGGAGGGCTTCACCGAGGCGCATGACAGCGTGCCC
GTGCAAACCGACCCACCCTTACGTATCGAGGGGACGAAACACCAAGAGCCGTCCCAAGGCAACGACGATGGCGCAGTGGG
GCGACAGATTGCGACCGAGTGGATACGCACGCAACGCGCCCACATGGCGATCGACCACATCGCGCTGCGGGTGGCCGAGT
TCTGCAATGCCCAACCGGTGCGCAGCGCAGGGAGCTGGGAAGCGTGGCTGGCTATCGACCAAGAGGTCGTCGCACAGACG
ACGTTGTTTTTGCGGCTTTCGCCGGACCAGCTATCGCTTCGCTTCAATACCAGTTCGCCAGATGCGCGCGAGGTACTTTG
GTGCGGAAAGCAGCGCCTGGAGGCTGCACTGACGTCCACGCTGAGTAGCACGCTCCAGATCAGCATCGAGGTTGTCTAA

Upstream 100 bases:

>100_bases
GCCGCATGATCGAAGCACGGCTGACCTGGCTGCAGGTCTATTCGTTCCAGGAGCTGGGTTCGGAGGTGCAGCTGCAGCCG
ATCGGTAGAGTGGTGGTGTG

Downstream 100 bases:

>100_bases
CGCGGCACTGGCGACAGAAAGCCATTTGGAGGAACTCCATCTTGCTAACCGAGCAGAGCCAGACTCCGCCGGCATGTGCA
CTCTCTCAGGCGTTGACGCG

Product: HpaC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRKPPLRHVRILPVSGALQRPAAPATPARSALRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPGPDAEEGFTEAHDSVP
VQTDPPLRIEGTKHQEPSQGNDDGAVGRQIATEWIRTQRAHMAIDHIALRVAEFCNAQPVRSAGSWEAWLAIDQEVVAQT
TLFLRLSPDQLSLRFNTSSPDAREVLWCGKQRLEAALTSTLSSTLQISIEVV

Sequences:

>Translated_212_residues
MRKPPLRHVRILPVSGALQRPAAPATPARSALRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPGPDAEEGFTEAHDSVP
VQTDPPLRIEGTKHQEPSQGNDDGAVGRQIATEWIRTQRAHMAIDHIALRVAEFCNAQPVRSAGSWEAWLAIDQEVVAQT
TLFLRLSPDQLSLRFNTSSPDAREVLWCGKQRLEAALTSTLSSTLQISIEVV
>Mature_212_residues
MRKPPLRHVRILPVSGALQRPAAPATPARSALRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPGPDAEEGFTEAHDSVP
VQTDPPLRIEGTKHQEPSQGNDDGAVGRQIATEWIRTQRAHMAIDHIALRVAEFCNAQPVRSAGSWEAWLAIDQEVVAQT
TLFLRLSPDQLSLRFNTSSPDAREVLWCGKQRLEAALTSTLSSTLQISIEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23407; Mature: 23407

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPPLRHVRILPVSGALQRPAAPATPARSALRSSFLQLRQRLRSAQLALPCMVLPPQCD
CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
EDRPGPDAEEGFTEAHDSVPVQTDPPLRIEGTKHQEPSQGNDDGAVGRQIATEWIRTQRA
CCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
HMAIDHIALRVAEFCNAQPVRSAGSWEAWLAIDQEVVAQTTLFLRLSPDQLSLRFNTSSP
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCEEEEEECCCCC
DAREVLWCGKQRLEAALTSTLSSTLQISIEVV
CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
>Mature Secondary Structure
MRKPPLRHVRILPVSGALQRPAAPATPARSALRSSFLQLRQRLRSAQLALPCMVLPPQCD
CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
EDRPGPDAEEGFTEAHDSVPVQTDPPLRIEGTKHQEPSQGNDDGAVGRQIATEWIRTQRA
CCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
HMAIDHIALRVAEFCNAQPVRSAGSWEAWLAIDQEVVAQTTLFLRLSPDQLSLRFNTSSP
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCEEEEEECCCCC
DAREVLWCGKQRLEAALTSTLSSTLQISIEVV
CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA