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The map label for this gene is hrcQ

Identifier: 78045979

GI number: 78045979

Start: 472630

End: 473544

Strand: Reverse

Name: hrcQ

Synonym: XCV0423

Alternate gene names: NA

Gene position: 473544-472630 (Counterclockwise)

Preceding gene: 78045980

Following gene: 78045978

Centisome position: 9.14

GC content: 65.9

Gene sequence:

>915_bases
GTGTTCGGCGACCCACGCGCAGCACGCCAATGCGGCTTTGCCACGCATTGCCGTCGCATCTCGCCCAATGATGCGGCCCG
CCTGCGCCTGCAGCTGGATGCCGGCCAGATGGAGTTGCGGATTGCCGCGCGCGACGGCTTGGCGCTGCTATTGAACGAGG
ACGATGACTCACTACGCGTTTCGATCGCGGGAATGCTACTGGCTGATCGCCTGGGCGCATTTGCGCCGCTCGGCCTGGGC
GCTGCCGAGGTGATCGCCTTCGAGCGCGATGCAGAGCCAGACGACTGCCACGGCATCGGCATGACACTGGGCGATCTCGA
TGCCATTGCGCTGACGGCGAGCGCGCCGCTGCTGGCCACGTTGCAGGCCGCAGTCGGCGGACTTGCGCCGCCCGCGCAGC
AGCCAGCCTGGCTGGCTGCACTGCGCGTCAACACGCGCCTGCGCATCGGCGGGCGCACCGCATCGGCGGCATTGCTGCAG
TCGCTGCGGCCTGGCGATGTCTTGCTGCATTGCACGGCCTCGGCTGCGGTGACCAGCGGCGATGTGCTCTGGGGTATCGC
CGGAGGCGTGGTATTGCGCGCGCCAGTGCGCTTGAACCTGCAACAGATGATCCTGGAGGCCAGCCCCACCATGCAGCACG
ATACGTTTGAGCCGGAAGTCGCGCCGTCCACCAGCAACGTGGCAGAACTGGAACTGCCGGTGCAGCTGGAAGTGGATCAA
CTTGCGCTGTCTCTATCGACCTTGTCGGGTTTACAGCCCGGGCAGATCCTGGAGTTGTCGGTGCCGGTCGATCAAGCCGA
CATCCGCCTGGTCGTTTACGGCCAGACCATCGGCACCGGCAGGCTGCTGGCAGTGGGCGAACATCTGGGTGTGCAGATCC
TCAGCATGTCGGAGAGCACGCATGCAGATGCCTGA

Upstream 100 bases:

>100_bases
GAACTCCATCTTGCTAACCGAGCAGAGCCAGACTCCGCCGGCATGTGCACTCTCTCAGGCGTTGACGCGCGTTGCGGCCG
AGCGCGCCCAGCTTGGCAGA

Downstream 100 bases:

>100_bases
CGTCGGCTCGCTGCTGCTGGTGGTCATCATGCTGGGCTTGCTGCCCTTCGCAGCGATGGTGGTCACCTCCTACACCAAGA
TCGTGGTCGTGCTCGGCCTG

Product: HrcQ protein

Products: NA

Alternate protein names: HrcQ Protein; Surface Presentation Of Antigens Domain-Containing Protein; Flagellar Motor Switch/Type III Secretory Pathway Protein; Type III Secretion System Apparatus Protein Hrcq; Type III Secretion Apparatus Protein SctQ; Type III Secretion Inner Membrane Protein SctQ; Hrp Conserved Protein HRCQ

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFGDPRAARQCGFATHCRRISPNDAARLRLQLDAGQMELRIAARDGLALLLNEDDDSLRVSIAGMLLADRLGAFAPLGLG
AAEVIAFERDAEPDDCHGIGMTLGDLDAIALTASAPLLATLQAAVGGLAPPAQQPAWLAALRVNTRLRIGGRTASAALLQ
SLRPGDVLLHCTASAAVTSGDVLWGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSESTHADA

Sequences:

>Translated_304_residues
MFGDPRAARQCGFATHCRRISPNDAARLRLQLDAGQMELRIAARDGLALLLNEDDDSLRVSIAGMLLADRLGAFAPLGLG
AAEVIAFERDAEPDDCHGIGMTLGDLDAIALTASAPLLATLQAAVGGLAPPAQQPAWLAALRVNTRLRIGGRTASAALLQ
SLRPGDVLLHCTASAAVTSGDVLWGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSESTHADA
>Mature_304_residues
MFGDPRAARQCGFATHCRRISPNDAARLRLQLDAGQMELRIAARDGLALLLNEDDDSLRVSIAGMLLADRLGAFAPLGLG
AAEVIAFERDAEPDDCHGIGMTLGDLDAIALTASAPLLATLQAAVGGLAPPAQQPAWLAALRVNTRLRIGGRTASAALLQ
SLRPGDVLLHCTASAAVTSGDVLWGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSESTHADA

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31801; Mature: 31801

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGDPRAARQCGFATHCRRISPNDAARLRLQLDAGQMELRIAARDGLALLLNEDDDSLRV
CCCCCHHHHHCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEECCCCCEEE
SIAGMLLADRLGAFAPLGLGAAEVIAFERDAEPDDCHGIGMTLGDLDAIALTASAPLLAT
EEHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCHHHH
LQAAVGGLAPPAQQPAWLAALRVNTRLRIGGRTASAALLQSLRPGDVLLHCTASAAVTSG
HHHHHCCCCCCCCCCCEEEEEEECEEEEECCCHHHHHHHHHCCCCCEEEEEECCCEECCC
DVLWGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ
CEEEEECCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHH
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSEST
HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCC
HADA
CCCC
>Mature Secondary Structure
MFGDPRAARQCGFATHCRRISPNDAARLRLQLDAGQMELRIAARDGLALLLNEDDDSLRV
CCCCCHHHHHCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEECCCCCEEE
SIAGMLLADRLGAFAPLGLGAAEVIAFERDAEPDDCHGIGMTLGDLDAIALTASAPLLAT
EEHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCHHHH
LQAAVGGLAPPAQQPAWLAALRVNTRLRIGGRTASAALLQSLRPGDVLLHCTASAAVTSG
HHHHHCCCCCCCCCCCEEEEEEECEEEEECCCHHHHHHHHHCCCCCEEEEEECCCEECCC
DVLWGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ
CEEEEECCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHH
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSEST
HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCC
HADA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA