| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is pucG [H]
Identifier: 78045864
GI number: 78045864
Start: 352050
End: 353243
Strand: Reverse
Name: pucG [H]
Synonym: XCV0308
Alternate gene names: 78045864
Gene position: 353243-352050 (Counterclockwise)
Preceding gene: 78045865
Following gene: 78045863
Centisome position: 6.82
GC content: 69.18
Gene sequence:
>1194_bases ATGGGCCCGGGCCCGGTCAATGCGCATCCGCGCGTGCTGCGTGCGATGGCCGCCGATCTGCTGGGGCAGTTCGATCCGGA AATGACCGCCTACATGAACGAGGTGATGGCGCTCTATCGGCCGTTGTTCGGCACCGAGAACCGCTGGACGTTCCTGGTCG ATGGCACCGCGCGCGCCGGTATCGAAGCGGCGCTGGTGTCGCTGGTCAGCCCGGGCGAGCGCGTGCTGGTGCTCAACTTC GGCCGCTTCGGCCTGTTGCTCACCGAAATCCTGGGCCGCCTCGGCGCCGAGGTCCACACGGTGGATGCGTCATGGGGCCA GGTGCTGCCGCTGAGCGCGATTGCCGAGGCGATCGAGCGCGTGGCGCCCAAGCTGGTGGCCACCGTGCACGGCGACACCT CCACCACCATGGCCCAGCCGCTCGATGGCCTCGGCGCGCTGTGCCGCGCAGCTGGCGCGCTGAGTTATGTGGACGCCACC GCCACCATCGGCGGCATGCCCGTCGCCAGCGACCGCTGGGAGGTGGACGTGGTCACCGGCGGTTTGCAGAAATGCCTGGG CGGGCCGTCCGGCTCGGCGCCGATCACCGTGTCCGAGCGCGCGGCCGAGGCCATCTTCGCGCGTCGCCATGTCGAACGCG GCATCGTGCGCGCCGACATCGCCAACGGCAGCGGCCCGCGCATCGCCTCGAACTATTTCGACCTGGCGATGATCATGGAT TACTGGTCGGACAAGCGCCTCAATCACCACACCGAAGCCACCACCATGCTGTACGGCGCCCGCGAATGCGCACGCGTGGC CCTGCAGGAAGGCCTGGATGCACGCTTCGCGCGCCACGCGGCGGCCGGGCGCGCGGTCAGTGCAGGTATCCGCGCGTTGG GGCTGGAAGTGTTCGGCGACGATGCGCATCGCATGCGCAACGTCACCGGCGTGGTGATTCCGCCTGGCATCGACGGCGAG GCGGTGCGCCGCCGCATGCGCGAGAATTTCGAGATCGAGATCGGCACCGCGTTCGGGCCGCTGCAGGGCAAGATCTGGCG CATCGGCGCGATGGGCTACAACGCCATGAAGCACAAGGTGCTGATCACCCTGGCCGCACTGGAAGCGGTACTGCGCGCCG AAGGTGATGCCTGCACGCACGGCCTGGCGGTGGAAGCGGCACTGGCCGCCTGGCACGCGGAAGCGCAGGCATGA
Upstream 100 bases:
>100_bases GTCATGCGCCATTTCATCGAACACCTGGGAGAACCCCTTGTCACCTGATCTGCGTCAGCTGCACACCTTTGGCGAACTCG ATCCCCCGCAGCGCCTGTTG
Downstream 100 bases:
>100_bases ACGCTGCGCGCGACCTGCTCGGCTATGGCGCCACGCCGCCCGCGGCGCAATGGCCGGGCGGCGCGCGCATCGCAGTGCAG TTCGTGATCAATTACGAAGA
Product: putative serine-pyruvate aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGPGPVNAHPRVLRAMAADLLGQFDPEMTAYMNEVMALYRPLFGTENRWTFLVDGTARAGIEAALVSLVSPGERVLVLNF GRFGLLLTEILGRLGAEVHTVDASWGQVLPLSAIAEAIERVAPKLVATVHGDTSTTMAQPLDGLGALCRAAGALSYVDAT ATIGGMPVASDRWEVDVVTGGLQKCLGGPSGSAPITVSERAAEAIFARRHVERGIVRADIANGSGPRIASNYFDLAMIMD YWSDKRLNHHTEATTMLYGARECARVALQEGLDARFARHAAAGRAVSAGIRALGLEVFGDDAHRMRNVTGVVIPPGIDGE AVRRRMRENFEIEIGTAFGPLQGKIWRIGAMGYNAMKHKVLITLAALEAVLRAEGDACTHGLAVEAALAAWHAEAQA
Sequences:
>Translated_397_residues MGPGPVNAHPRVLRAMAADLLGQFDPEMTAYMNEVMALYRPLFGTENRWTFLVDGTARAGIEAALVSLVSPGERVLVLNF GRFGLLLTEILGRLGAEVHTVDASWGQVLPLSAIAEAIERVAPKLVATVHGDTSTTMAQPLDGLGALCRAAGALSYVDAT ATIGGMPVASDRWEVDVVTGGLQKCLGGPSGSAPITVSERAAEAIFARRHVERGIVRADIANGSGPRIASNYFDLAMIMD YWSDKRLNHHTEATTMLYGARECARVALQEGLDARFARHAAAGRAVSAGIRALGLEVFGDDAHRMRNVTGVVIPPGIDGE AVRRRMRENFEIEIGTAFGPLQGKIWRIGAMGYNAMKHKVLITLAALEAVLRAEGDACTHGLAVEAALAAWHAEAQA >Mature_396_residues GPGPVNAHPRVLRAMAADLLGQFDPEMTAYMNEVMALYRPLFGTENRWTFLVDGTARAGIEAALVSLVSPGERVLVLNFG RFGLLLTEILGRLGAEVHTVDASWGQVLPLSAIAEAIERVAPKLVATVHGDTSTTMAQPLDGLGALCRAAGALSYVDATA TIGGMPVASDRWEVDVVTGGLQKCLGGPSGSAPITVSERAAEAIFARRHVERGIVRADIANGSGPRIASNYFDLAMIMDY WSDKRLNHHTEATTMLYGARECARVALQEGLDARFARHAAAGRAVSAGIRALGLEVFGDDAHRMRNVTGVVIPPGIDGEA VRRRMRENFEIEIGTAFGPLQGKIWRIGAMGYNAMKHKVLITLAALEAVLRAEGDACTHGLAVEAALAAWHAEAQA
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=376, Percent_Identity=31.9148936170213, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17536281, Length=364, Percent_Identity=36.2637362637363, Blast_Score=226, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6321079, Length=207, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI17530823, Length=378, Percent_Identity=35.4497354497354, Blast_Score=214, Evalue=6e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 42223; Mature: 42092
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPGPVNAHPRVLRAMAADLLGQFDPEMTAYMNEVMALYRPLFGTENRWTFLVDGTARAG CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH IEAALVSLVSPGERVLVLNFGRFGLLLTEILGRLGAEVHTVDASWGQVLPLSAIAEAIER HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH VAPKLVATVHGDTSTTMAQPLDGLGALCRAAGALSYVDATATIGGMPVASDRWEVDVVTG HHHHHEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH GLQKCLGGPSGSAPITVSERAAEAIFARRHVERGIVRADIANGSGPRIASNYFDLAMIMD HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHH YWSDKRLNHHTEATTMLYGARECARVALQEGLDARFARHAAAGRAVSAGIRALGLEVFGD HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCC DAHRMRNVTGVVIPPGIDGEAVRRRMRENFEIEIGTAFGPLQGKIWRIGAMGYNAMKHKV CHHHHHCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHH LITLAALEAVLRAEGDACTHGLAVEAALAAWHAEAQA HHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GPGPVNAHPRVLRAMAADLLGQFDPEMTAYMNEVMALYRPLFGTENRWTFLVDGTARAG CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH IEAALVSLVSPGERVLVLNFGRFGLLLTEILGRLGAEVHTVDASWGQVLPLSAIAEAIER HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH VAPKLVATVHGDTSTTMAQPLDGLGALCRAAGALSYVDATATIGGMPVASDRWEVDVVTG HHHHHEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH GLQKCLGGPSGSAPITVSERAAEAIFARRHVERGIVRADIANGSGPRIASNYFDLAMIMD HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHH YWSDKRLNHHTEATTMLYGARECARVALQEGLDARFARHAAAGRAVSAGIRALGLEVFGD HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCC DAHRMRNVTGVVIPPGIDGEAVRRRMRENFEIEIGTAFGPLQGKIWRIGAMGYNAMKHKV CHHHHHCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHH LITLAALEAVLRAEGDACTHGLAVEAALAAWHAEAQA HHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]