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The map label for this gene is yncB [H]

Identifier: 78045851

GI number: 78045851

Start: 339585

End: 340613

Strand: Reverse

Name: yncB [H]

Synonym: XCV0295

Alternate gene names: 78045851

Gene position: 340613-339585 (Counterclockwise)

Preceding gene: 78045852

Following gene: 78045850

Centisome position: 6.58

GC content: 65.5

Gene sequence:

>1029_bases
ATGACGTCCATCATCAACCGCCGCATCGTGCTGGCATCGCGCCCGCACGGAGAACCCAGCGCCGACAATTTCCGCATCGA
AGAGGTCGCCGTCGAACCGACCGGCCACGACCAGATTCTGGTCCGCAATCGCTTCCTGTCGCTGGACCCGTATATGCGTG
GCCGCATGGACGAAGGTCCCTCTTACGCCGCGCCAGTGGCCATCGATGCCGTGATGGAAGGCGGCACCGTCGGCGAAGTC
ATTGCGTCCAATCACGCCGACTATCAGCCTGGCGATCTGCTGGTGCTGCCCGGCGGCTGGCAGACGCATAGCCTGTTGAC
CCCCACGACACCCCTGCGCAAGCTGCCCAAGGACGACAGCCTGCCACTGAGCACCGCGCTCGGCGTCTATGGCATGCCCG
GCTTTACCGCGTATGCGGGCCTGCATGAAATCGGCAAGCCACAGCCCGGCGAAACGCTGGTGGTCGCTGCCGCCAGCGGC
CCGGTCGGCGCCACGGTGGCGCAGCTGGCACGCCTGCAGGGCCTGCGCGTGGTCGCCATTGCCGGTGGCGAAGAAAAAGT
ACGTTACCTGCGTGACACGCTGCAGGTGGAGGTGGCGCTGGACCACCGCGCCGACGACTTTGCAGAGCAGTTGCGCGCCG
CAACGCCGGACGGCATCGACATCTATTTCGAAAACGTTGGCGGCAAGGTGTTCGATGCGGTGCTGCCGCAGCTCAACGAC
TTTGCACGCATCCCGGTCTGCGGCGTGATCGCGACCTACAACAGCCGTGGGCAAGCCCACCCCGGCCCGGATCGCCTGCC
CGACTTCATGGGCCAGGTGCTGCGCAAACGCCTGACGGTGCGCGGCTTCATCCAGCACGATTTCATCCGCCTGATGCCTG
CCTTCCTGCGCGAAATGGGCCAGTGGCTGCGCGAGGACAAAATTCAGTACCGCGAGCACGTGCTGCACGGCCTGGACAGC
GCCCCGCAGGGCCTGATCGACGTGTTGCGCGGCAAGAACTTCGGCAAGGCCGTCGTCGCTCTGGACTAA

Upstream 100 bases:

>100_bases
ATGCACCCTGCTGCGCCTGTGACAGCACTCTCCCGCGCAGCCGCACAGCGGCTGTGCTCACCCGACCGCCCACGCGCGGA
CTGCCTACGAGCCATTCCCC

Downstream 100 bases:

>100_bases
CGGTATTCGTCGTGCCTCTCTACACCCTTCGCGCTTGCGATTTTCCATTCCCAAGCGACCCAATGCGCGGCGGCGCCAGC
GCCAATCATTCGTGATCCCA

Product: Zinc-containing alcohol dehydrogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTSIINRRIVLASRPHGEPSADNFRIEEVAVEPTGHDQILVRNRFLSLDPYMRGRMDEGPSYAAPVAIDAVMEGGTVGEV
IASNHADYQPGDLLVLPGGWQTHSLLTPTTPLRKLPKDDSLPLSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASG
PVGATVAQLARLQGLRVVAIAGGEEKVRYLRDTLQVEVALDHRADDFAEQLRAATPDGIDIYFENVGGKVFDAVLPQLND
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMGQWLREDKIQYREHVLHGLDS
APQGLIDVLRGKNFGKAVVALD

Sequences:

>Translated_342_residues
MTSIINRRIVLASRPHGEPSADNFRIEEVAVEPTGHDQILVRNRFLSLDPYMRGRMDEGPSYAAPVAIDAVMEGGTVGEV
IASNHADYQPGDLLVLPGGWQTHSLLTPTTPLRKLPKDDSLPLSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASG
PVGATVAQLARLQGLRVVAIAGGEEKVRYLRDTLQVEVALDHRADDFAEQLRAATPDGIDIYFENVGGKVFDAVLPQLND
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMGQWLREDKIQYREHVLHGLDS
APQGLIDVLRGKNFGKAVVALD
>Mature_341_residues
TSIINRRIVLASRPHGEPSADNFRIEEVAVEPTGHDQILVRNRFLSLDPYMRGRMDEGPSYAAPVAIDAVMEGGTVGEVI
ASNHADYQPGDLLVLPGGWQTHSLLTPTTPLRKLPKDDSLPLSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASGP
VGATVAQLARLQGLRVVAIAGGEEKVRYLRDTLQVEVALDHRADDFAEQLRAATPDGIDIYFENVGGKVFDAVLPQLNDF
ARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMGQWLREDKIQYREHVLHGLDSA
PQGLIDVLRGKNFGKAVVALD

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=348, Percent_Identity=34.4827586206897, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI226246680, Length=348, Percent_Identity=34.4827586206897, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI22748929, Length=348, Percent_Identity=34.4827586206897, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI226059159, Length=329, Percent_Identity=36.1702127659575, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI226059133, Length=329, Percent_Identity=36.1702127659575, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI226056130, Length=244, Percent_Identity=38.9344262295082, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI28557745, Length=327, Percent_Identity=27.217125382263, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI226510941, Length=335, Percent_Identity=57.910447761194, Blast_Score=377, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI133901712, Length=353, Percent_Identity=29.1784702549575, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI133901710, Length=353, Percent_Identity=29.1784702549575, Blast_Score=158, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6323504, Length=331, Percent_Identity=29.0030211480363, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37305; Mature: 37174

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIINRRIVLASRPHGEPSADNFRIEEVAVEPTGHDQILVRNRFLSLDPYMRGRMDEGP
CCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCEECCCHHHHCCCCCCC
SYAAPVAIDAVMEGGTVGEVIASNHADYQPGDLLVLPGGWQTHSLLTPTTPLRKLPKDDS
CCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCC
LPLSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASGPVGATVAQLARLQGLRVVAI
CCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEE
AGGEEKVRYLRDTLQVEVALDHRADDFAEQLRAATPDGIDIYFENVGGKVFDAVLPQLND
ECCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMG
HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWLREDKIQYREHVLHGLDSAPQGLIDVLRGKNFGKAVVALD
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure 
TSIINRRIVLASRPHGEPSADNFRIEEVAVEPTGHDQILVRNRFLSLDPYMRGRMDEGP
CCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCEECCCHHHHCCCCCCC
SYAAPVAIDAVMEGGTVGEVIASNHADYQPGDLLVLPGGWQTHSLLTPTTPLRKLPKDDS
CCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCC
LPLSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASGPVGATVAQLARLQGLRVVAI
CCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEE
AGGEEKVRYLRDTLQVEVALDHRADDFAEQLRAATPDGIDIYFENVGGKVFDAVLPQLND
ECCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMG
HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWLREDKIQYREHVLHGLDSAPQGLIDVLRGKNFGKAVVALD
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]