| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is accC [H]
Identifier: 78045827
GI number: 78045827
Start: 315451
End: 317478
Strand: Reverse
Name: accC [H]
Synonym: XCV0271
Alternate gene names: 78045827
Gene position: 317478-315451 (Counterclockwise)
Preceding gene: 78045828
Following gene: 78045826
Centisome position: 6.13
GC content: 66.96
Gene sequence:
>2028_bases ATGACCCAGCGCGACCCTATCGCCGCAGCAACGCAAGCGCCCTTCGACAAGATCCTGATCGCCAATCGCGGCGAGATTGC CTGCCGGGTCATCGCCACCTGCCGCACCCTGGGCATTGCGACGGTGGCGGTGTATTCGGATGCAGACCGCAATGCACGGC ATGTGCGCATGGCGGACGAGGCGGTGCACATCGGCGCCGCGCCCGCGCAGCAGAGCTATCTGCGGGGCGAAGCAATCCTG CAAGCGGCACGCGCCACCGGTGCGCAGGCGATCCATCCCGGTTATGGGTTCCTGTCGGAAAACGCGGCATTTGCCGAGGC TTGCGCACACGCTGGCATCGTCTTCATCGGCCCACCGGCGGCGGCGATCCGGGCGATGGGCGACAAGAGTGCGGCCAAGG CACTGATGCAACGGGCCGGCGTGCCGCTGACACCGGGCTACCACGGCGACGAGCAGGCACCGGCATTCCTGCGTGCGCAA GCCGACGCCATCGGCTACCCGGTGTTGATCAAGGCCAGTGCCGGCGGTGGCGGCAAGGGCATGCGTCGGGTGGATACCAG CGCAGCGTTCGAAGACGCGCTGGCGAGCTGCCAGCGTGAAGCGCAGTCGGCATTCGGCAACGCGCACGTGCTGGTGGAGA AATATGTCCAGCGGCCGCGGCATATCGAAATCCAGGTGTTCGGCGATACGCATGGCGAGGTGGTGTACCTGTTCGAACGC GACTGCTCGGTGCAGCGCCGCCACCAGAAGGTGCTGGAAGAAGCGCCCGCACCGGGCATGAGTGAAGCCAGGCGCGCGGC GATGGGCAAGGCGGCGGTAGATGCGGCACAGGCGGTGGGCTACGTCGGTGCCGGCACGGTGGAATTCATCGCCGGCCCGG ACGGCGATTTCTATTTCATGGAAATGAATACCCGTCTGCAGGTGGAGCACCCGGTGACCGAATTGATCACCGGCACCGAC CTGGTCGAGTGGCAATTGCGGGTTGCCGCTGGCGCACGCTTGCCGCGCAGGCAGCACGAGCTGCGCATCCACGGGCATGC ACTGGAAGCGCGCCTGTACGCCGAAGATGCCGAGCGCGGTTTCCTGCCGTCCACCGGCACGCTGCGTCAGTTGCAGATGC CTGCTGCCAGCGCGCATGTGCGCGTCGATGCAGGCGTGGAGCAAGGCGACACCATTAGCCCGTACTACGACCCGATGATC GCCAAGCTGATCGTCTGGGATACCGATCGCACGGCTGCATTGGCCCGCATGCGCGCGGCATTGGCGCAATTCCACGCAGT AGGGGTCACCACCAACAGTGCATTTCTGTCGCGCCTGATCGCGACCGATTCGTTCGCATCGGCGAATCTGGACACCGCCT TGATCGAGCGCGAACACGCCGTGCTGTTTCCAGAGGCGCGCAGCCCCGACAACGCCTGGTGGTGCTTGGCAGCGGTGTTG ATTGCCGATGCATTGCCGCCAGCGGCCGTTGATCCGGCCGATCCGCATTCGCCGTGGCAGCACGCGGACGGCTGGCGCAT CGGTGCGCATGCAGCGCAGCGCATCGTCCTGGAAGCAAACGGCGAGCGCCGCCAACTCGCTGTGCGCCCGGATGCCGATG GCTGGCAAGTCACCGACGCAGGCCAGACGCATGCCGTGCGCTACCACCCGCACGAGACGGGCGTGCGGGTGGAGATGGAC GGCCGGCAATGGCGTGCACAGGTGTTGCGCGACGGCGCCACGCTGACCCTGATCGGGGCCACGCAGCGGGCCGTCTTCCG TCACCACGATGCACTGGCAGAAGCCGACCAGCCCACCCAGGACACCGGCGGACTGACCGCACCGATGCCCGGCCGCATCG TGGCCCTGCCCGCAGCAGTAGGCCAGCCGGTCGCCCGTGGGCAGGCACTGGTGGTGCTGGAAGCGATGAAAATGGAGCAC ACCCTGCACGCGCCCAGCGATGGCACCGTGCAGGCGTACCTGGTGGCCGAAGGCGACCTGGTGAACGACGGTGCGGCGCT GGTGGAATTTGTGTCCGCGTCTGCGTAG
Upstream 100 bases:
>100_bases GACAACAAACCTGCTTGCGCTCGATGTCGGTGTGCAACAGGCAAGCCGTTTATCTTCGTAAGACGACCCGCCGCTACGGC GACGTGCAGAGACTGATCCG
Downstream 100 bases:
>100_bases CGGCGCATGGCAGGGTGACCAACGGCACGTTCGCCTGCGCGCACGCTGCCGCTAGCGTGGCAAATCGGCCGGTTCGGCCG CCTTGCCACCGGAGTTCCCA
Product: biotin carboxylase
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MTQRDPIAAATQAPFDKILIANRGEIACRVIATCRTLGIATVAVYSDADRNARHVRMADEAVHIGAAPAQQSYLRGEAIL QAARATGAQAIHPGYGFLSENAAFAEACAHAGIVFIGPPAAAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQ ADAIGYPVLIKASAGGGGKGMRRVDTSAAFEDALASCQREAQSAFGNAHVLVEKYVQRPRHIEIQVFGDTHGEVVYLFER DCSVQRRHQKVLEEAPAPGMSEARRAAMGKAAVDAAQAVGYVGAGTVEFIAGPDGDFYFMEMNTRLQVEHPVTELITGTD LVEWQLRVAAGARLPRRQHELRIHGHALEARLYAEDAERGFLPSTGTLRQLQMPAASAHVRVDAGVEQGDTISPYYDPMI AKLIVWDTDRTAALARMRAALAQFHAVGVTTNSAFLSRLIATDSFASANLDTALIEREHAVLFPEARSPDNAWWCLAAVL IADALPPAAVDPADPHSPWQHADGWRIGAHAAQRIVLEANGERRQLAVRPDADGWQVTDAGQTHAVRYHPHETGVRVEMD GRQWRAQVLRDGATLTLIGATQRAVFRHHDALAEADQPTQDTGGLTAPMPGRIVALPAAVGQPVARGQALVVLEAMKMEH TLHAPSDGTVQAYLVAEGDLVNDGAALVEFVSASA
Sequences:
>Translated_675_residues MTQRDPIAAATQAPFDKILIANRGEIACRVIATCRTLGIATVAVYSDADRNARHVRMADEAVHIGAAPAQQSYLRGEAIL QAARATGAQAIHPGYGFLSENAAFAEACAHAGIVFIGPPAAAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQ ADAIGYPVLIKASAGGGGKGMRRVDTSAAFEDALASCQREAQSAFGNAHVLVEKYVQRPRHIEIQVFGDTHGEVVYLFER DCSVQRRHQKVLEEAPAPGMSEARRAAMGKAAVDAAQAVGYVGAGTVEFIAGPDGDFYFMEMNTRLQVEHPVTELITGTD LVEWQLRVAAGARLPRRQHELRIHGHALEARLYAEDAERGFLPSTGTLRQLQMPAASAHVRVDAGVEQGDTISPYYDPMI AKLIVWDTDRTAALARMRAALAQFHAVGVTTNSAFLSRLIATDSFASANLDTALIEREHAVLFPEARSPDNAWWCLAAVL IADALPPAAVDPADPHSPWQHADGWRIGAHAAQRIVLEANGERRQLAVRPDADGWQVTDAGQTHAVRYHPHETGVRVEMD GRQWRAQVLRDGATLTLIGATQRAVFRHHDALAEADQPTQDTGGLTAPMPGRIVALPAAVGQPVARGQALVVLEAMKMEH TLHAPSDGTVQAYLVAEGDLVNDGAALVEFVSASA >Mature_674_residues TQRDPIAAATQAPFDKILIANRGEIACRVIATCRTLGIATVAVYSDADRNARHVRMADEAVHIGAAPAQQSYLRGEAILQ AARATGAQAIHPGYGFLSENAAFAEACAHAGIVFIGPPAAAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQA DAIGYPVLIKASAGGGGKGMRRVDTSAAFEDALASCQREAQSAFGNAHVLVEKYVQRPRHIEIQVFGDTHGEVVYLFERD CSVQRRHQKVLEEAPAPGMSEARRAAMGKAAVDAAQAVGYVGAGTVEFIAGPDGDFYFMEMNTRLQVEHPVTELITGTDL VEWQLRVAAGARLPRRQHELRIHGHALEARLYAEDAERGFLPSTGTLRQLQMPAASAHVRVDAGVEQGDTISPYYDPMIA KLIVWDTDRTAALARMRAALAQFHAVGVTTNSAFLSRLIATDSFASANLDTALIEREHAVLFPEARSPDNAWWCLAAVLI ADALPPAAVDPADPHSPWQHADGWRIGAHAAQRIVLEANGERRQLAVRPDADGWQVTDAGQTHAVRYHPHETGVRVEMDG RQWRAQVLRDGATLTLIGATQRAVFRHHDALAEADQPTQDTGGLTAPMPGRIVALPAAVGQPVARGQALVVLEAMKMEHT LHAPSDGTVQAYLVAEGDLVNDGAALVEFVSASA
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=675, Percent_Identity=47.7037037037037, Blast_Score=605, Evalue=1e-173, Organism=Homo sapiens, GI65506442, Length=681, Percent_Identity=42.5844346549192, Blast_Score=481, Evalue=1e-136, Organism=Homo sapiens, GI189095269, Length=684, Percent_Identity=42.6900584795322, Blast_Score=481, Evalue=1e-136, Organism=Homo sapiens, GI295821183, Length=668, Percent_Identity=41.9161676646707, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI106049528, Length=497, Percent_Identity=42.0523138832998, Blast_Score=360, Evalue=3e-99, Organism=Homo sapiens, GI106049295, Length=497, Percent_Identity=42.0523138832998, Blast_Score=360, Evalue=3e-99, Organism=Homo sapiens, GI106049292, Length=497, Percent_Identity=42.0523138832998, Blast_Score=360, Evalue=3e-99, Organism=Homo sapiens, GI38679974, Length=722, Percent_Identity=29.2243767313019, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI38679977, Length=722, Percent_Identity=29.2243767313019, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI38679967, Length=722, Percent_Identity=29.2243767313019, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI38679960, Length=722, Percent_Identity=29.2243767313019, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI38679971, Length=722, Percent_Identity=29.2243767313019, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI134142062, Length=504, Percent_Identity=31.3492063492063, Blast_Score=249, Evalue=8e-66, Organism=Escherichia coli, GI1789654, Length=447, Percent_Identity=50.3355704697987, Blast_Score=414, Evalue=1e-117, Organism=Caenorhabditis elegans, GI71987519, Length=675, Percent_Identity=46.962962962963, Blast_Score=562, Evalue=1e-160, Organism=Caenorhabditis elegans, GI17567343, Length=696, Percent_Identity=41.5229885057471, Blast_Score=459, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17562816, Length=503, Percent_Identity=42.544731610338, Blast_Score=349, Evalue=2e-96, Organism=Caenorhabditis elegans, GI133931226, Length=702, Percent_Identity=28.4900284900285, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI71997163, Length=491, Percent_Identity=28.1059063136456, Blast_Score=195, Evalue=6e-50, Organism=Caenorhabditis elegans, GI71997168, Length=473, Percent_Identity=28.5412262156448, Blast_Score=194, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6319685, Length=446, Percent_Identity=45.2914798206278, Blast_Score=400, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6319695, Length=498, Percent_Identity=39.7590361445783, Blast_Score=315, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6321376, Length=502, Percent_Identity=40.2390438247012, Blast_Score=304, Evalue=3e-83, Organism=Saccharomyces cerevisiae, GI6323863, Length=707, Percent_Identity=28.4299858557284, Blast_Score=255, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6324343, Length=729, Percent_Identity=28.9437585733882, Blast_Score=253, Evalue=9e-68, Organism=Drosophila melanogaster, GI24651757, Length=669, Percent_Identity=47.3841554559043, Blast_Score=598, Evalue=1e-171, Organism=Drosophila melanogaster, GI24651759, Length=629, Percent_Identity=46.2639109697933, Blast_Score=543, Evalue=1e-154, Organism=Drosophila melanogaster, GI24652212, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=5e-98, Organism=Drosophila melanogaster, GI24652210, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=5e-98, Organism=Drosophila melanogaster, GI24652214, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=5e-98, Organism=Drosophila melanogaster, GI19921944, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=5e-98, Organism=Drosophila melanogaster, GI24652216, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=5e-98, Organism=Drosophila melanogaster, GI281363050, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI24652224, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI24652222, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI24652220, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI24652218, Length=505, Percent_Identity=42.7722772277228, Blast_Score=355, Evalue=6e-98, Organism=Drosophila melanogaster, GI24586458, Length=700, Percent_Identity=29.1428571428571, Blast_Score=265, Evalue=8e-71, Organism=Drosophila melanogaster, GI161076409, Length=700, Percent_Identity=29.1428571428571, Blast_Score=265, Evalue=8e-71, Organism=Drosophila melanogaster, GI161076407, Length=700, Percent_Identity=29.1428571428571, Blast_Score=265, Evalue=9e-71, Organism=Drosophila melanogaster, GI24586460, Length=700, Percent_Identity=29.1428571428571, Blast_Score=265, Evalue=9e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 72181; Mature: 72050
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRDPIAAATQAPFDKILIANRGEIACRVIATCRTLGIATVAVYSDADRNARHVRMADE CCCCCCCCHHCCCCCCEEEEECCCCEEEHHHHHHHHHCEEEEEEEECCCCCCCEEEECCC AVHIGAAPAQQSYLRGEAILQAARATGAQAIHPGYGFLSENAAFAEACAHAGIVFIGPPA EEEECCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCEEEECCCH AAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQADAIGYPVLIKASAGGGGKG HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC MRRVDTSAAFEDALASCQREAQSAFGNAHVLVEKYVQRPRHIEIQVFGDTHGEVVYLFER CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEC DCSVQRRHQKVLEEAPAPGMSEARRAAMGKAAVDAAQAVGYVGAGTVEFIAGPDGDFYFM CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEE EMNTRLQVEHPVTELITGTDLVEWQLRVAAGARLPRRQHELRIHGHALEARLYAEDAERG EECCEEEECCCHHHHHCCCCCEEEEEEEHHCCCCCCCCCEEEEECEEEEEEEEECHHCCC FLPSTGTLRQLQMPAASAHVRVDAGVEQGDTISPYYDPMIAKLIVWDTDRTAALARMRAA CCCCCCCHHEEECCCCCCEEEEECCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHHHHHH LAQFHAVGVTTNSAFLSRLIATDSFASANLDTALIEREHAVLFPEARSPDNAWWCLAAVL HHHHHHEEEEEHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHH IADALPPAAVDPADPHSPWQHADGWRIGAHAAQRIVLEANGERRQLAVRPDADGWQVTDA HHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEEEECCCCCEEEEECCCCCCCEEECC GQTHAVRYHPHETGVRVEMDGRQWRAQVLRDGATLTLIGATQRAVFRHHDALAEADQPTQ CCCEEEEECCCCCCEEEEECCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCCCC DTGGLTAPMPGRIVALPAAVGQPVARGQALVVLEAMKMEHTLHAPSDGTVQAYLVAEGDL CCCCCCCCCCCCEEEECHHHCCHHHCCCEEEEEEHHHHHHHCCCCCCCCEEEEEEECCCC VNDGAALVEFVSASA CCCCHHHHHHHHCCC >Mature Secondary Structure TQRDPIAAATQAPFDKILIANRGEIACRVIATCRTLGIATVAVYSDADRNARHVRMADE CCCCCCCHHCCCCCCEEEEECCCCEEEHHHHHHHHHCEEEEEEEECCCCCCCEEEECCC AVHIGAAPAQQSYLRGEAILQAARATGAQAIHPGYGFLSENAAFAEACAHAGIVFIGPPA EEEECCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCEEEECCCH AAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQADAIGYPVLIKASAGGGGKG HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC MRRVDTSAAFEDALASCQREAQSAFGNAHVLVEKYVQRPRHIEIQVFGDTHGEVVYLFER CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEC DCSVQRRHQKVLEEAPAPGMSEARRAAMGKAAVDAAQAVGYVGAGTVEFIAGPDGDFYFM CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEE EMNTRLQVEHPVTELITGTDLVEWQLRVAAGARLPRRQHELRIHGHALEARLYAEDAERG EECCEEEECCCHHHHHCCCCCEEEEEEEHHCCCCCCCCCEEEEECEEEEEEEEECHHCCC FLPSTGTLRQLQMPAASAHVRVDAGVEQGDTISPYYDPMIAKLIVWDTDRTAALARMRAA CCCCCCCHHEEECCCCCCEEEEECCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHHHHHH LAQFHAVGVTTNSAFLSRLIATDSFASANLDTALIEREHAVLFPEARSPDNAWWCLAAVL HHHHHHEEEEEHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHH IADALPPAAVDPADPHSPWQHADGWRIGAHAAQRIVLEANGERRQLAVRPDADGWQVTDA HHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEEEECCCCCEEEEECCCCCCCEEECC GQTHAVRYHPHETGVRVEMDGRQWRAQVLRDGATLTLIGATQRAVFRHHDALAEADQPTQ CCCEEEEECCCCCCEEEEECCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCCCC DTGGLTAPMPGRIVALPAAVGQPVARGQALVVLEAMKMEHTLHAPSDGTVQAYLVAEGDL CCCCCCCCCCCCEEEECHHHCCHHHCCCEEEEEEHHHHHHHCCCCCCCCEEEEEEECCCC VNDGAALVEFVSASA CCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]