| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045768
Identifier: 78045768
GI number: 78045768
Start: 248263
End: 249543
Strand: Reverse
Name: 78045768
Synonym: XCV0212
Alternate gene names: NA
Gene position: 249543-248263 (Counterclockwise)
Preceding gene: 78045769
Following gene: 78045767
Centisome position: 4.82
GC content: 56.75
Gene sequence:
>1281_bases GTGGGGAGCAGCAGAAGCGAGGGTGGGCCAATGACCGATGCGCGCGCGTGGAAGTGGTCGACATTTCCGCCGTTGGCGCT CAGCGGGCTGGGAACTGCCCATGTCGAGTCGATGGCGAGCTACGTCGCCCGTCTGTCTGCAACTCAAGGACAGAGCACGG TGGCCTTCCTAGACTCTCTCGACGAGGTCTGCAATGAGAGGCCTTTGCGAAATGATCGAGCTCGATGCGCCCTCATTGGC CCGGGCAGGAGGTTCATGGTGCGCCTGATTGCCCTGGAAGAGCTTACCGGCGGCCAGATTCTCCGGCCGGGCACTCTGTA CGCCATTGCCGCAGCTATTCGCCCAGGAAGCGAGGGACTGGCCAATGCACGTCATTGGTGTCCTGTGTGCCTGGATGAAT TTGTTCAATCCGGAGTCAGCGGGCGACTTAGTTGGGTGTTCTCTGATCTGTCGCACTGCTCATTGCATTTCGCGAGAATC GAAAGTTACTGCTGGAGATGCAAGTCGCAGCAACCGTTTGTGCCAGGAAATGCAAACATCCAGAATTGCGTGCTGTGCGG AGCGAGCCTCGCTGCAAGCGCACAGTCCGCCACGGGTGTCTCGAAACAGGCGCTATGGACTGACGGATGTATAGAAGAGC TCGTTTGCTTCCTAAGCTCCAATCCGCCAATGGTCGTACCAGGGGGATATGAGTCATATATCGATCGGTTGTCAAAGATG GGGGCACTGTCTAAAAGTCATCATGCTTTCCGGCGAGGCGCTCCCAGTATCAGGTCATTGCTTAACGTCTGCGCGTACAT GGGAGTCCGCCTAGTGGACGTGCTGCTGTGCCCAGATGATCTGCCTGTCGACCGCCTAGTTGATGGCGAGGAGGAACCCC GACTGCTTTCTCTACCTGTGGAGTCGAGGAACCTGCAGCTACGACGTTTGGAGTACCTGTTAGAGGCACTAGCAGGGGAG CGCCATGGTCTTGTTCCACCCTTGGCCTTCCTTCTCGAGAGATATGGCCTTTCGGCATCGGTCAAACAACTGAAAGAGCG GAACTCGTATCAGTGCTATCTCAGAAGGCATAAGCTACAGAAATGCCTTCTGACCAGTAGAACGAGCAGGCCGATCATCG CCGCTGCCTTCAGTATGCTCGATTCCGGCGTGACTACTGAAAAAGCAGTGCAGAATCTGAGCGAGTCGACACGAATCAGC GTCAGGGCACTCGAGCCCTACGTCAGATGTGTTGGAAGGGTCTTAGTGCTAGAGAGCGAGGCCCGAGCCGCAGTCTTGTA G
Upstream 100 bases:
>100_bases GCCGAGAGCATCTGCTCGGCATGTGGGAGCACGCGAAGGCGTTTGATGGGCTCTGCGAAATCAATACGGATGCAGCAGAC CTAGGCTACCTAAATCTCAA
Downstream 100 bases:
>100_bases ATCGTCATCTTGTAGTCAATTCTCTGCGACCAATCATGAGGCGGCACGTATGCCGAGCACAGCGTCTTCATTCACATACC TCTTCCTAGACACTGAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MGSSRSEGGPMTDARAWKWSTFPPLALSGLGTAHVESMASYVARLSATQGQSTVAFLDSLDEVCNERPLRNDRARCALIG PGRRFMVRLIALEELTGGQILRPGTLYAIAAAIRPGSEGLANARHWCPVCLDEFVQSGVSGRLSWVFSDLSHCSLHFARI ESYCWRCKSQQPFVPGNANIQNCVLCGASLAASAQSATGVSKQALWTDGCIEELVCFLSSNPPMVVPGGYESYIDRLSKM GALSKSHHAFRRGAPSIRSLLNVCAYMGVRLVDVLLCPDDLPVDRLVDGEEEPRLLSLPVESRNLQLRRLEYLLEALAGE RHGLVPPLAFLLERYGLSASVKQLKERNSYQCYLRRHKLQKCLLTSRTSRPIIAAAFSMLDSGVTTEKAVQNLSESTRIS VRALEPYVRCVGRVLVLESEARAAVL
Sequences:
>Translated_426_residues MGSSRSEGGPMTDARAWKWSTFPPLALSGLGTAHVESMASYVARLSATQGQSTVAFLDSLDEVCNERPLRNDRARCALIG PGRRFMVRLIALEELTGGQILRPGTLYAIAAAIRPGSEGLANARHWCPVCLDEFVQSGVSGRLSWVFSDLSHCSLHFARI ESYCWRCKSQQPFVPGNANIQNCVLCGASLAASAQSATGVSKQALWTDGCIEELVCFLSSNPPMVVPGGYESYIDRLSKM GALSKSHHAFRRGAPSIRSLLNVCAYMGVRLVDVLLCPDDLPVDRLVDGEEEPRLLSLPVESRNLQLRRLEYLLEALAGE RHGLVPPLAFLLERYGLSASVKQLKERNSYQCYLRRHKLQKCLLTSRTSRPIIAAAFSMLDSGVTTEKAVQNLSESTRIS VRALEPYVRCVGRVLVLESEARAAVL >Mature_425_residues GSSRSEGGPMTDARAWKWSTFPPLALSGLGTAHVESMASYVARLSATQGQSTVAFLDSLDEVCNERPLRNDRARCALIGP GRRFMVRLIALEELTGGQILRPGTLYAIAAAIRPGSEGLANARHWCPVCLDEFVQSGVSGRLSWVFSDLSHCSLHFARIE SYCWRCKSQQPFVPGNANIQNCVLCGASLAASAQSATGVSKQALWTDGCIEELVCFLSSNPPMVVPGGYESYIDRLSKMG ALSKSHHAFRRGAPSIRSLLNVCAYMGVRLVDVLLCPDDLPVDRLVDGEEEPRLLSLPVESRNLQLRRLEYLLEALAGER HGLVPPLAFLLERYGLSASVKQLKERNSYQCYLRRHKLQKCLLTSRTSRPIIAAAFSMLDSGVTTEKAVQNLSESTRISV RALEPYVRCVGRVLVLESEARAAVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46683; Mature: 46552
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSRSEGGPMTDARAWKWSTFPPLALSGLGTAHVESMASYVARLSATQGQSTVAFLDSL CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DEVCNERPLRNDRARCALIGPGRRFMVRLIALEELTGGQILRPGTLYAIAAAIRPGSEGL HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCHHH ANARHWCPVCLDEFVQSGVSGRLSWVFSDLSHCSLHFARIESYCWRCKSQQPFVPGNANI CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH QNCVLCGASLAASAQSATGVSKQALWTDGCIEELVCFLSSNPPMVVPGGYESYIDRLSKM HHHHHCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH GALSKSHHAFRRGAPSIRSLLNVCAYMGVRLVDVLLCPDDLPVDRLVDGEEEPRLLSLPV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEECCC ESRNLQLRRLEYLLEALAGERHGLVPPLAFLLERYGLSASVKQLKERNSYQCYLRRHKLQ CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH KCLLTSRTSRPIIAAAFSMLDSGVTTEKAVQNLSESTRISVRALEPYVRCVGRVLVLESE HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHEEECC ARAAVL CHHCCC >Mature Secondary Structure GSSRSEGGPMTDARAWKWSTFPPLALSGLGTAHVESMASYVARLSATQGQSTVAFLDSL CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DEVCNERPLRNDRARCALIGPGRRFMVRLIALEELTGGQILRPGTLYAIAAAIRPGSEGL HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCHHH ANARHWCPVCLDEFVQSGVSGRLSWVFSDLSHCSLHFARIESYCWRCKSQQPFVPGNANI CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH QNCVLCGASLAASAQSATGVSKQALWTDGCIEELVCFLSSNPPMVVPGGYESYIDRLSKM HHHHHCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH GALSKSHHAFRRGAPSIRSLLNVCAYMGVRLVDVLLCPDDLPVDRLVDGEEEPRLLSLPV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEECCC ESRNLQLRRLEYLLEALAGERHGLVPPLAFLLERYGLSASVKQLKERNSYQCYLRRHKLQ CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH KCLLTSRTSRPIIAAAFSMLDSGVTTEKAVQNLSESTRISVRALEPYVRCVGRVLVLESE HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHEEECC ARAAVL CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA