Click here to switch to the map view.

The map label for this gene is 78045769

Identifier: 78045769

GI number: 78045769

Start: 249510

End: 250532

Strand: Reverse

Name: 78045769

Synonym: XCV0213

Alternate gene names: NA

Gene position: 250532-249510 (Counterclockwise)

Preceding gene: 78045770

Following gene: 78045768

Centisome position: 4.84

GC content: 57.18

Gene sequence:

>1023_bases
ATGCCATCTAGCCGAGTCCTTCTTCATCCAAAGTTCCAGTCCACGGAGCGCGATCTAGCGGCGACGCTCACGTTGGCCCA
ACCTGGAAGCCTCGTGTTCTTGATCGGCATATCTGGTGTTGGCAAGAGCGAGCTTCGGTATCGGAGCATGAGATCGGTTG
CGGGTGCTCCGTCAGGTTGGGACAAGGGCATCCTTCCTGCAATTGCGGTCAGAGCGACGCTTACGGATCGGGGGTTCTTC
AACCCCAAGGATCTTGCTATGCGGCTCGCTCACGCTCTGCGGGCACCAGACCTCACATGGCTGAGCGATAGAGATCAGAT
AGATGATCCTGAAGTAGTCCACGCCAAACTGGAGATCGCAGAGAAGGCTCAGCCGTGGCTAGATGCACGTAGATCAACCA
CCGAGCACGCGCTTCGATTTGAGTTCGAGCGCCATGCCAGAGCTCGCCGACTCCGATGGATCTTCATAGAAGAGTGCGCG
TCGATAGGCACATTGTCGCGCGGGCGATCCGTGCACAACTATGTCCTCGGCCTAATGCAGTTGGCTGAAGAGTGTGGTCT
TACGATCATCCTGTTCGGCACGCCGCGCGCCGCGGCGCTATGGGACTGCCATCCTGATATACGCCGGCGGTCACTCTTCG
TGTGGGCGCAGCGGTACAGGGAGGATCGGCCTGAGGATCATCGACCATTTGCCAGTCTGGTCTCTTCCCTAGGAAAGCAT
TTGCCGCTGGAAAGGCCTGATCTACTTGTCCAGAATCTGGAACTGGCGCTAGCGAACTCAGCAGGGTCGTACGGCGAAGT
AAAGCAGTTCTTGCTCCGAGCAGATCAAGCAAGGGTTCGACGTGACTCCCACACGATCGATTTGTGCGATCTCCATCAAG
CGTCCTATAGCCGAGAGCATCTGCTCGGCATGTGGGAGCACGCGAAGGCGTTTGATGGGCTCTGCGAAATCAATACGGAT
GCAGCAGACCTAGGCTACCTAAATCTCAAGTGGGGAGCAGCAGAAGCGAGGGTGGGCCAATGA

Upstream 100 bases:

>100_bases
GCGCGTAGGTCGACAAAGGACCGCCCGGCCTCACGAAGCATCTCCGTGTCTTTGGAAGGGTTGGATGACTACGGGCAGGA
ATTGAGGGAAGGAGGTAGAG

Downstream 100 bases:

>100_bases
CCGATGCGCGCGCGTGGAAGTGGTCGACATTTCCGCCGTTGGCGCTCAGCGGGCTGGGAACTGCCCATGTCGAGTCGATG
GCGAGCTACGTCGCCCGTCT

Product: putative transposition helper protein

Products: NA

Alternate protein names: AAA ATPase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPSSRVLLHPKFQSTERDLAATLTLAQPGSLVFLIGISGVGKSELRYRSMRSVAGAPSGWDKGILPAIAVRATLTDRGFF
NPKDLAMRLAHALRAPDLTWLSDRDQIDDPEVVHAKLEIAEKAQPWLDARRSTTEHALRFEFERHARARRLRWIFIEECA
SIGTLSRGRSVHNYVLGLMQLAEECGLTIILFGTPRAAALWDCHPDIRRRSLFVWAQRYREDRPEDHRPFASLVSSLGKH
LPLERPDLLVQNLELALANSAGSYGEVKQFLLRADQARVRRDSHTIDLCDLHQASYSREHLLGMWEHAKAFDGLCEINTD
AADLGYLNLKWGAAEARVGQ

Sequences:

>Translated_340_residues
MPSSRVLLHPKFQSTERDLAATLTLAQPGSLVFLIGISGVGKSELRYRSMRSVAGAPSGWDKGILPAIAVRATLTDRGFF
NPKDLAMRLAHALRAPDLTWLSDRDQIDDPEVVHAKLEIAEKAQPWLDARRSTTEHALRFEFERHARARRLRWIFIEECA
SIGTLSRGRSVHNYVLGLMQLAEECGLTIILFGTPRAAALWDCHPDIRRRSLFVWAQRYREDRPEDHRPFASLVSSLGKH
LPLERPDLLVQNLELALANSAGSYGEVKQFLLRADQARVRRDSHTIDLCDLHQASYSREHLLGMWEHAKAFDGLCEINTD
AADLGYLNLKWGAAEARVGQ
>Mature_339_residues
PSSRVLLHPKFQSTERDLAATLTLAQPGSLVFLIGISGVGKSELRYRSMRSVAGAPSGWDKGILPAIAVRATLTDRGFFN
PKDLAMRLAHALRAPDLTWLSDRDQIDDPEVVHAKLEIAEKAQPWLDARRSTTEHALRFEFERHARARRLRWIFIEECAS
IGTLSRGRSVHNYVLGLMQLAEECGLTIILFGTPRAAALWDCHPDIRRRSLFVWAQRYREDRPEDHRPFASLVSSLGKHL
PLERPDLLVQNLELALANSAGSYGEVKQFLLRADQARVRRDSHTIDLCDLHQASYSREHLLGMWEHAKAFDGLCEINTDA
ADLGYLNLKWGAAEARVGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38314; Mature: 38183

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSRVLLHPKFQSTERDLAATLTLAQPGSLVFLIGISGVGKSELRYRSMRSVAGAPSGW
CCCCCEEECCCCCCCHHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCC
DKGILPAIAVRATLTDRGFFNPKDLAMRLAHALRAPDLTWLSDRDQIDDPEVVHAKLEIA
CCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHH
EKAQPWLDARRSTTEHALRFEFERHARARRLRWIFIEECASIGTLSRGRSVHNYVLGLMQ
HHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCHHCCCHHHHHHHHHHH
LAEECGLTIILFGTPRAAALWDCHPDIRRRSLFVWAQRYREDRPEDHRPFASLVSSLGKH
HHHHCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LPLERPDLLVQNLELALANSAGSYGEVKQFLLRADQARVRRDSHTIDLCDLHQASYSREH
CCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHH
LLGMWEHAKAFDGLCEINTDAADLGYLNLKWGAAEARVGQ
HHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
PSSRVLLHPKFQSTERDLAATLTLAQPGSLVFLIGISGVGKSELRYRSMRSVAGAPSGW
CCCCEEECCCCCCCHHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCC
DKGILPAIAVRATLTDRGFFNPKDLAMRLAHALRAPDLTWLSDRDQIDDPEVVHAKLEIA
CCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHH
EKAQPWLDARRSTTEHALRFEFERHARARRLRWIFIEECASIGTLSRGRSVHNYVLGLMQ
HHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCHHCCCHHHHHHHHHHH
LAEECGLTIILFGTPRAAALWDCHPDIRRRSLFVWAQRYREDRPEDHRPFASLVSSLGKH
HHHHCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LPLERPDLLVQNLELALANSAGSYGEVKQFLLRADQARVRRDSHTIDLCDLHQASYSREH
CCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHH
LLGMWEHAKAFDGLCEINTDAADLGYLNLKWGAAEARVGQ
HHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA