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The map label for this gene is tldD [C]

Identifier: 78045648

GI number: 78045648

Start: 107796

End: 109430

Strand: Reverse

Name: tldD [C]

Synonym: XCV0092

Alternate gene names: 78045648

Gene position: 109430-107796 (Counterclockwise)

Preceding gene: 78045649

Following gene: 78045647

Centisome position: 2.11

GC content: 64.65

Gene sequence:

>1635_bases
GTGCAGCGACGTGATTTCCTGGCCCTCACCGGGCTGACCATGGGCGGGCTGATCGTGCCTGCCTACTTCGGCAAGGCCAT
TGCCGCCGAGCAGTTGCTCACGCCCTTCGATGTGGGCCGCAAGAAGCGTCTGGCCGATGCCGGCTTGAACGCGGCGCGCC
AGGCCGGAGCGAGCTATTGCGATGTGCGCATCGGCCGCTACCTGCGCCAGTTCGTGATCACCCGCGAAGACAAGGTGCAG
AACGTGGTCAACACCGAGTCCATCGGCGCCGGCATCCGCGTCATCGTGGGCGGCGCGTGGGGCTTTGCCGCCACCAACGA
GCTCACCGAGCAGGGCGTGGCCAAGGCCGCCGCGCAGGCGGCGGCAATCGCCAAGGCCAATGCCAAGGTGCAGGGCACGC
CGGTGCAACTGGCGCCGACGCCGGGCGTGGGCGAGGTGAGCTGGAAGACGCCGATCAAGAAAAACGCCATGGAAGTGCCG
ATCAAGGACAAGGTGGACCTGCTGCTCGGCGTCAATGCCGCCGCCACTGCGGCCGGGGCCAATTTCGTCAACTCGATGCT
GTTCGTGGTCAACGAGCAGAAGTATTTCGCCAGCACCGACGGCTCCTACATCGACCAGGACGTGCACCGCATCTGGGCGC
CGATGAGCGTGACGGCCATCGACAAGGCCAGCGGCAAGTTCCGCACCCGCGATGGGTTGTCCGCGCCGATGGGGCTGGGC
TATGAATATCTCGATGGCGCCGCCTCCGGCAAGTTCGTCTCGCCCAACGGCGTGGTCAATTACGGCCTGTCCTACGACAT
GAAGGAAGATGCGATTGCGGCGGCCAAGCAGGCGCAGGAAAAGCTCAAGGCGCCGTCGGTCAAGCCGGGCAAGTACGACC
TGGTGCTGGATCCCTCGCACACCTGGCTCACCATCCACGAGTCGATCGGTCACCCGCTGGAGCTGGACCGCGTGCTCGGC
TACGAAGCCAACTACGCCGGCACCAGCTTCGCCACGCTGGACAAGCTCAAGGCCGGTTTCCAGTACGGCAGCGACAAGGT
GCATATCCTCGCCGACAAGACCCAACCCGGTAGCCTCGGTGCGGTGGGCTACGACGATGAAGGCGTCAAGACCAAGCAGT
GGGACCTGATCCGCGACGGCAAGCTGGTGGACTACCAGGCCATCCGCGATCAGGCGCATATCCTGGGCAAGACCGCCTCC
GATGGCTGCTGCTATGCAGATTCGTGGTCGAGCGTGCAGTTCCAGCGCATGGCCAATGTGTCGCTGGCCGCCGGCAAGAC
GCCGCTGAGCGTGAGCGATCTGATCAAGAACGTGGAAAACGGCATCTACATCATCGGCGATGGCTCGTTCTCCATCGACC
AGCAGCGTTACAACGCGCAGTTCGGTGGCCAGCTGTTCTACGAAATCAAGAACGGCGCCATCACCCGCATGCTCGAAGAC
GTGGCCTACCAGATCCGCACCCCAGAGTTCTGGAATGCCTGCAGCGCCGTGGCCGACCAGCGCGACTACCGCCTGGGCGG
CTCGTTCTTCGACGGCAAGGGCCAGCCGAGCCAGGTCTCGGCGGTCTCGCACGGTTCGTCCACCGCCCGCTTCGATGGCA
TCAATGTCATCAGCACCGCCCGCTCGCTCGGCTGA

Upstream 100 bases:

>100_bases
GCATTCATCGCCCGGCAAGAATCGGCCGATACCGCGCGCAGAGCCATGTGCGTGTCACCACACCACCTGCGCGCCGCGCG
GGACTATTGGGGAGTTGCCC

Downstream 100 bases:

>100_bases
CAGGAGAAACCCACATGAGCATCCTTACCGAAGCGCAGGCCAAGGCCATCCTGGACAAGGTCATCAAGCTGTCCAAGGCC
GACGAGTGCACCGCCACGCT

Product: putative modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MQRRDFLALTGLTMGGLIVPAYFGKAIAAEQLLTPFDVGRKKRLADAGLNAARQAGASYCDVRIGRYLRQFVITREDKVQ
NVVNTESIGAGIRVIVGGAWGFAATNELTEQGVAKAAAQAAAIAKANAKVQGTPVQLAPTPGVGEVSWKTPIKKNAMEVP
IKDKVDLLLGVNAAATAAGANFVNSMLFVVNEQKYFASTDGSYIDQDVHRIWAPMSVTAIDKASGKFRTRDGLSAPMGLG
YEYLDGAASGKFVSPNGVVNYGLSYDMKEDAIAAAKQAQEKLKAPSVKPGKYDLVLDPSHTWLTIHESIGHPLELDRVLG
YEANYAGTSFATLDKLKAGFQYGSDKVHILADKTQPGSLGAVGYDDEGVKTKQWDLIRDGKLVDYQAIRDQAHILGKTAS
DGCCYADSWSSVQFQRMANVSLAAGKTPLSVSDLIKNVENGIYIIGDGSFSIDQQRYNAQFGGQLFYEIKNGAITRMLED
VAYQIRTPEFWNACSAVADQRDYRLGGSFFDGKGQPSQVSAVSHGSSTARFDGINVISTARSLG

Sequences:

>Translated_544_residues
MQRRDFLALTGLTMGGLIVPAYFGKAIAAEQLLTPFDVGRKKRLADAGLNAARQAGASYCDVRIGRYLRQFVITREDKVQ
NVVNTESIGAGIRVIVGGAWGFAATNELTEQGVAKAAAQAAAIAKANAKVQGTPVQLAPTPGVGEVSWKTPIKKNAMEVP
IKDKVDLLLGVNAAATAAGANFVNSMLFVVNEQKYFASTDGSYIDQDVHRIWAPMSVTAIDKASGKFRTRDGLSAPMGLG
YEYLDGAASGKFVSPNGVVNYGLSYDMKEDAIAAAKQAQEKLKAPSVKPGKYDLVLDPSHTWLTIHESIGHPLELDRVLG
YEANYAGTSFATLDKLKAGFQYGSDKVHILADKTQPGSLGAVGYDDEGVKTKQWDLIRDGKLVDYQAIRDQAHILGKTAS
DGCCYADSWSSVQFQRMANVSLAAGKTPLSVSDLIKNVENGIYIIGDGSFSIDQQRYNAQFGGQLFYEIKNGAITRMLED
VAYQIRTPEFWNACSAVADQRDYRLGGSFFDGKGQPSQVSAVSHGSSTARFDGINVISTARSLG
>Mature_544_residues
MQRRDFLALTGLTMGGLIVPAYFGKAIAAEQLLTPFDVGRKKRLADAGLNAARQAGASYCDVRIGRYLRQFVITREDKVQ
NVVNTESIGAGIRVIVGGAWGFAATNELTEQGVAKAAAQAAAIAKANAKVQGTPVQLAPTPGVGEVSWKTPIKKNAMEVP
IKDKVDLLLGVNAAATAAGANFVNSMLFVVNEQKYFASTDGSYIDQDVHRIWAPMSVTAIDKASGKFRTRDGLSAPMGLG
YEYLDGAASGKFVSPNGVVNYGLSYDMKEDAIAAAKQAQEKLKAPSVKPGKYDLVLDPSHTWLTIHESIGHPLELDRVLG
YEANYAGTSFATLDKLKAGFQYGSDKVHILADKTQPGSLGAVGYDDEGVKTKQWDLIRDGKLVDYQAIRDQAHILGKTAS
DGCCYADSWSSVQFQRMANVSLAAGKTPLSVSDLIKNVENGIYIIGDGSFSIDQQRYNAQFGGQLFYEIKNGAITRMLED
VAYQIRTPEFWNACSAVADQRDYRLGGSFFDGKGQPSQVSAVSHGSSTARFDGINVISTARSLG

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=459, Percent_Identity=25.7080610021786, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 58402; Mature: 58402

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRDFLALTGLTMGGLIVPAYFGKAIAAEQLLTPFDVGRKKRLADAGLNAARQAGASYC
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHCCCCHH
DVRIGRYLRQFVITREDKVQNVVNTESIGAGIRVIVGGAWGFAATNELTEQGVAKAAAQA
HHHHHHHHHHHHHCCHHHHHHHHCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
AAIAKANAKVQGTPVQLAPTPGVGEVSWKTPIKKNAMEVPIKDKVDLLLGVNAAATAAGA
HHHHHCCCEECCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCHHHHHHHH
NFVNSMLFVVNEQKYFASTDGSYIDQDVHRIWAPMSVTAIDKASGKFRTRDGLSAPMGLG
HHHHCEEEEEECCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCC
YEYLDGAASGKFVSPNGVVNYGLSYDMKEDAIAAAKQAQEKLKAPSVKPGKYDLVLDPSH
HHHHCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
TWLTIHESIGHPLELDRVLGYEANYAGTSFATLDKLKAGFQYGSDKVHILADKTQPGSLG
CEEEEEHHCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
AVGYDDEGVKTKQWDLIRDGKLVDYQAIRDQAHILGKTASDGCCYADSWSSVQFQRMANV
CCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHHHHCCCCCCCCEECCCCCCEEHHHHCCE
SLAAGKTPLSVSDLIKNVENGIYIIGDGSFSIDQQRYNAQFGGQLFYEIKNGAITRMLED
EEECCCCCCCHHHHHHHHCCCEEEEECCCCEECHHHHCCCCCCEEEEEECCCHHHHHHHH
VAYQIRTPEFWNACSAVADQRDYRLGGSFFDGKGQPSQVSAVSHGSSTARFDGINVISTA
HHHHCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEECCCCCCCEECCCHHHHHH
RSLG
HHCC
>Mature Secondary Structure
MQRRDFLALTGLTMGGLIVPAYFGKAIAAEQLLTPFDVGRKKRLADAGLNAARQAGASYC
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHCCCCHH
DVRIGRYLRQFVITREDKVQNVVNTESIGAGIRVIVGGAWGFAATNELTEQGVAKAAAQA
HHHHHHHHHHHHHCCHHHHHHHHCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
AAIAKANAKVQGTPVQLAPTPGVGEVSWKTPIKKNAMEVPIKDKVDLLLGVNAAATAAGA
HHHHHCCCEECCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCHHHHHHHH
NFVNSMLFVVNEQKYFASTDGSYIDQDVHRIWAPMSVTAIDKASGKFRTRDGLSAPMGLG
HHHHCEEEEEECCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCC
YEYLDGAASGKFVSPNGVVNYGLSYDMKEDAIAAAKQAQEKLKAPSVKPGKYDLVLDPSH
HHHHCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
TWLTIHESIGHPLELDRVLGYEANYAGTSFATLDKLKAGFQYGSDKVHILADKTQPGSLG
CEEEEEHHCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
AVGYDDEGVKTKQWDLIRDGKLVDYQAIRDQAHILGKTASDGCCYADSWSSVQFQRMANV
CCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHHHHCCCCCCCCEECCCCCCEEHHHHCCE
SLAAGKTPLSVSDLIKNVENGIYIIGDGSFSIDQQRYNAQFGGQLFYEIKNGAITRMLED
EEECCCCCCCHHHHHHHHCCCEEEEECCCCEECHHHHCCCCCCEEEEEECCCHHHHHHHH
VAYQIRTPEFWNACSAVADQRDYRLGGSFFDGKGQPSQVSAVSHGSSTARFDGINVISTA
HHHHCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEECCCCCCCEECCCHHHHHH
RSLG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]