| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045641
Identifier: 78045641
GI number: 78045641
Start: 98176
End: 99957
Strand: Reverse
Name: 78045641
Synonym: XCV0085
Alternate gene names: NA
Gene position: 99957-98176 (Counterclockwise)
Preceding gene: 78045642
Following gene: 78045638
Centisome position: 1.93
GC content: 74.64
Gene sequence:
>1782_bases ATGACGCCCTCCTTGCCCTGGTTGGTCGGTGCGGCATTGCTGCTGATCGCCGTCATCGGCTGCGTGCGCCTGCTGCGGGC GCACCACCGGCAGCCGTATGCGCGCACCCGGCTCTGGCTGCTGTTCGCCGCCCAACCGTTGCTCGCGGCACTGCTCTATC CGGTGCTGCTGCCCCCGCCGCGCGCCGGTACCGGTGGGGAACTGCATGTCGCCACCGCCGGCACCGCCGCCGGGCAGATC TCCACCGGCGACCTCGCGCGCTGGGTCGCCCTGCCCGAGGCGCCCGCATTACCCGGCGTGATGCGCGTGCCGGACCTGGC CACCGCACTGCGGCGCGCACCCGGCACCACGGCGCTGGTGGTGCATGGCAGCGGCCTGCCCGCGCGCGACCGTGAGGGCC TGAACATTCCGCTGCGGCTGAAGCTCAGCCCCGCCCCACGCGGCGTGGTCGCGGTCTCGCCCCCACCGCCACTCGCCCCG GGCGACACCATTGCGGTGTCTGCGCAGGTGCAGGGCCTTCCCGACGCGCGCGTGGAACTGCTCGATCCGGCCGGGCAGGT GGTGGACAGCGCCGTGGCCGACCGCGCCGGCCGCGTGCGCCTGCGCGGCCTGGCGCGCGCGCCGGGCCAGGTGCTGTTCG CCGTGCGTGCACGCGATGCCGCCGATGCAGAACGCAGCCGCGTGGAGGTACCGGTGCTGATCGCTGCGATGCCGCCGATG CGCGTACTGCTCCTGGCCGGCGCGCCGCAGCCGGAGCTGAAATACCTGCGCCGCTGGGCCAGCGATGCCGGGCTGGACGT GCGTAGCCAGATCGCGGTCGGCGCTGGCGTGCAACTCGGCGAGGGCGCTGCGCTGGATGCGGCCAGCCTGGACCGGCTGG ACCTGCTGATCGTCGACCCGCGCCGCCTGGTCGCACTGGGTGCTGCGCAGCGCCAGACCTTACGCGCCGCGATCCAGCGC GGCCTGGGTGTCTTGGTGCGCACCGACGGGCCGCTGGACGCCGGCACCCGCGCTGCGCTGGCCGCGCTCGGCCTCGGCGT CAGCGGCGGCAGCACCAGCAGCCCGGTGCCGGCACCGCAGCGACTCTCACCGCCGGCCGCACCTGCCGATCCTGCCGGCG GCCCCGGCGACGCCCCGACGCTGGCGCCGCTGCAACGTCGCGACCTGCAACCGCAAGCCACCGACGCCCTGGTCGCCGCC CGCGCCGACGATGGCAGCGCCCTGGGCTGGTGGCGCGCCCAGGGCCGCGGGCGCATCGGCATCGGCCTGGTGGAAGACAG CTTCGCGCTGGTGCTGGCCGGCCGCAGCGATCTGCACGCCGCGCTCTGGGCGCAGTTGTCCGGCGCCGTCGCCCGCCCAG GCGGCGCGCTACCCACCCCGGTGCAGGAAGGCTGGTCGCAACACCGCATGCCGCTGTGCGACCTGCACGCCGACGCCTTG GTGACCGACCCTGACCGGGCTCGCCACCCATTACTGCCGGAGCGCAATGGCGATGGGCCGCGTTGCGCCGGCTACTGGCC AACAACCCCCGGCTGGCATCGCCTGGAGAGCGGCAACACCCAACGCTGGCTCCATGTCCGCGCGCCCAATGAAGCGCCGG CCCTGTACGCACAGCAAAGCCGCCTCGCCACCATCGCCCTGGCGGCCGGCGCTGCCTCCGCACCCATTGCACACCCTGCT ACCCAACCCGGCGCGCGCTGGCCGTGGCTGCTGGTCTGGCTCGGCGCGGCCGCCGCGTTGTGGTGGTTTGAGCGAAAGCG ACCTTCGCAACGGGTGCCGTAA
Upstream 100 bases:
>100_bases TAGACCTGGCAGCAGGCGGTCCGCCGTCGTGGGCGCGGACCGCATCGCCAAGGCTGTACGGCGGGCGCTTTCAGGATGCA TTGCGCCCGGAGCACCAACC
Downstream 100 bases:
>100_bases CAAGCGCTTGAACGACCTAGGAAAGGCGGCGTTGCAGATCGACGTTGCCAAGGGCGGAATGGCCCGCTGCACAGAGTCGC GTGTGGTCTTGAATCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MTPSLPWLVGAALLLIAVIGCVRLLRAHHRQPYARTRLWLLFAAQPLLAALLYPVLLPPPRAGTGGELHVATAGTAAGQI STGDLARWVALPEAPALPGVMRVPDLATALRRAPGTTALVVHGSGLPARDREGLNIPLRLKLSPAPRGVVAVSPPPPLAP GDTIAVSAQVQGLPDARVELLDPAGQVVDSAVADRAGRVRLRGLARAPGQVLFAVRARDAADAERSRVEVPVLIAAMPPM RVLLLAGAPQPELKYLRRWASDAGLDVRSQIAVGAGVQLGEGAALDAASLDRLDLLIVDPRRLVALGAAQRQTLRAAIQR GLGVLVRTDGPLDAGTRAALAALGLGVSGGSTSSPVPAPQRLSPPAAPADPAGGPGDAPTLAPLQRRDLQPQATDALVAA RADDGSALGWWRAQGRGRIGIGLVEDSFALVLAGRSDLHAALWAQLSGAVARPGGALPTPVQEGWSQHRMPLCDLHADAL VTDPDRARHPLLPERNGDGPRCAGYWPTTPGWHRLESGNTQRWLHVRAPNEAPALYAQQSRLATIALAAGAASAPIAHPA TQPGARWPWLLVWLGAAAALWWFERKRPSQRVP
Sequences:
>Translated_593_residues MTPSLPWLVGAALLLIAVIGCVRLLRAHHRQPYARTRLWLLFAAQPLLAALLYPVLLPPPRAGTGGELHVATAGTAAGQI STGDLARWVALPEAPALPGVMRVPDLATALRRAPGTTALVVHGSGLPARDREGLNIPLRLKLSPAPRGVVAVSPPPPLAP GDTIAVSAQVQGLPDARVELLDPAGQVVDSAVADRAGRVRLRGLARAPGQVLFAVRARDAADAERSRVEVPVLIAAMPPM RVLLLAGAPQPELKYLRRWASDAGLDVRSQIAVGAGVQLGEGAALDAASLDRLDLLIVDPRRLVALGAAQRQTLRAAIQR GLGVLVRTDGPLDAGTRAALAALGLGVSGGSTSSPVPAPQRLSPPAAPADPAGGPGDAPTLAPLQRRDLQPQATDALVAA RADDGSALGWWRAQGRGRIGIGLVEDSFALVLAGRSDLHAALWAQLSGAVARPGGALPTPVQEGWSQHRMPLCDLHADAL VTDPDRARHPLLPERNGDGPRCAGYWPTTPGWHRLESGNTQRWLHVRAPNEAPALYAQQSRLATIALAAGAASAPIAHPA TQPGARWPWLLVWLGAAAALWWFERKRPSQRVP >Mature_592_residues TPSLPWLVGAALLLIAVIGCVRLLRAHHRQPYARTRLWLLFAAQPLLAALLYPVLLPPPRAGTGGELHVATAGTAAGQIS TGDLARWVALPEAPALPGVMRVPDLATALRRAPGTTALVVHGSGLPARDREGLNIPLRLKLSPAPRGVVAVSPPPPLAPG DTIAVSAQVQGLPDARVELLDPAGQVVDSAVADRAGRVRLRGLARAPGQVLFAVRARDAADAERSRVEVPVLIAAMPPMR VLLLAGAPQPELKYLRRWASDAGLDVRSQIAVGAGVQLGEGAALDAASLDRLDLLIVDPRRLVALGAAQRQTLRAAIQRG LGVLVRTDGPLDAGTRAALAALGLGVSGGSTSSPVPAPQRLSPPAAPADPAGGPGDAPTLAPLQRRDLQPQATDALVAAR ADDGSALGWWRAQGRGRIGIGLVEDSFALVLAGRSDLHAALWAQLSGAVARPGGALPTPVQEGWSQHRMPLCDLHADALV TDPDRARHPLLPERNGDGPRCAGYWPTTPGWHRLESGNTQRWLHVRAPNEAPALYAQQSRLATIALAAGAASAPIAHPAT QPGARWPWLLVWLGAAAALWWFERKRPSQRVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62034; Mature: 61903
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSLPWLVGAALLLIAVIGCVRLLRAHHRQPYARTRLWLLFAAQPLLAALLYPVLLPPP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHHCCCC RAGTGGELHVATAGTAAGQISTGDLARWVALPEAPALPGVMRVPDLATALRRAPGTTALV CCCCCCEEEEEECCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEE VHGSGLPARDREGLNIPLRLKLSPAPRGVVAVSPPPPLAPGDTIAVSAQVQGLPDARVEL EECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCHHEE LDPAGQVVDSAVADRAGRVRLRGLARAPGQVLFAVRARDAADAERSRVEVPVLIAAMPPM ECCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCEEEECCCCE RVLLLAGAPQPELKYLRRWASDAGLDVRSQIAVGAGVQLGEGAALDAASLDRLDLLIVDP EEEEEECCCCHHHHHHHHHHCCCCCCHHHHEEECCCCEECCCCCCCCCCCCCEEEEEECC RRLVALGAAQRQTLRAAIQRGLGVLVRTDGPLDAGTRAALAALGLGVSGGSTSSPVPAPQ HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC RLSPPAAPADPAGGPGDAPTLAPLQRRDLQPQATDALVAARADDGSALGWWRAQGRGRIG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEE IGLVEDSFALVLAGRSDLHAALWAQLSGAVARPGGALPTPVQEGWSQHRMPLCDLHADAL EEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCE VTDPDRARHPLLPERNGDGPRCAGYWPTTPGWHRLESGNTQRWLHVRAPNEAPALYAQQS ECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCCEEEEEEECCCCCCCHHHHHC RLATIALAAGAASAPIAHPATQPGARWPWLLVWLGAAAALWWFERKRPSQRVP CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TPSLPWLVGAALLLIAVIGCVRLLRAHHRQPYARTRLWLLFAAQPLLAALLYPVLLPPP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHHCCCC RAGTGGELHVATAGTAAGQISTGDLARWVALPEAPALPGVMRVPDLATALRRAPGTTALV CCCCCCEEEEEECCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEE VHGSGLPARDREGLNIPLRLKLSPAPRGVVAVSPPPPLAPGDTIAVSAQVQGLPDARVEL EECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCHHEE LDPAGQVVDSAVADRAGRVRLRGLARAPGQVLFAVRARDAADAERSRVEVPVLIAAMPPM ECCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCEEEECCCCE RVLLLAGAPQPELKYLRRWASDAGLDVRSQIAVGAGVQLGEGAALDAASLDRLDLLIVDP EEEEEECCCCHHHHHHHHHHCCCCCCHHHHEEECCCCEECCCCCCCCCCCCCEEEEEECC RRLVALGAAQRQTLRAAIQRGLGVLVRTDGPLDAGTRAALAALGLGVSGGSTSSPVPAPQ HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC RLSPPAAPADPAGGPGDAPTLAPLQRRDLQPQATDALVAARADDGSALGWWRAQGRGRIG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEE IGLVEDSFALVLAGRSDLHAALWAQLSGAVARPGGALPTPVQEGWSQHRMPLCDLHADAL EEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCE VTDPDRARHPLLPERNGDGPRCAGYWPTTPGWHRLESGNTQRWLHVRAPNEAPALYAQQS ECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCCEEEEEEECCCCCCCHHHHHC RLATIALAAGAASAPIAHPATQPGARWPWLLVWLGAAAALWWFERKRPSQRVP CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA