| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045642
Identifier: 78045642
GI number: 78045642
Start: 99954
End: 102374
Strand: Reverse
Name: 78045642
Synonym: XCV0086
Alternate gene names: NA
Gene position: 102374-99954 (Counterclockwise)
Preceding gene: 78045643
Following gene: 78045641
Centisome position: 1.98
GC content: 73.56
Gene sequence:
>2421_bases ATGAGCACGCCGGCACTGCAGCGGGCGTGGCAGGCGGCACGGCGGCGACAGGCCGCAGGCGTGCTGTTGTTCGGGCTGCC GTGGGCAGCGCTGCCGGCGGCGCTGGCGTGGCGCGCCGGTGCGCAGGTCGCCGTCGTGGTGCTGCTGCTTCTGGGCCTGC TGGCACTGGGCGGCGCGGCGCTGCTGGCCGCGCGGCGTCTCGACCAGGCCTGGCTGATCCGCCGGCTGGACCGCGATGCA GATCTGGAGGACAGCAGCGATTTGCTGTTCGCGCCGATCGCTCAACTCGGTCCGCTGCAGACCCTGCAACGGCAACGGCT GGAGCAGCGCCTGCGCAGCACCCCGCGCGATCTGCGCCCGGCCTGGCCGTGGCGCCGCGCCTGGCCCTGGAGCGTGCTGG GTGTGCTCGCCTGCGGTGCGCTGCTGCTGTGGCCGCAACCGGCCACCCAACGCACCCCGCCAACCGACCGCGTTGCCGCC GCGCGTGCCAGCAGTGGCGCCCCCACGCTGCGGCAGGCGCAGCTACGCAGCAGCCCGCCGGCCTACACCGGTCTGCCGGC CGCGCGCCTGCCCGGCCTGGATGCGAAGGTGCCGGCCGGCACCCGGCTGGACTGGCAACTGCAGGTCAGCCCGGCGCCGC GCAGCGTGGCCCTGCGGCTTACCGACGGCCGCACCGTCGCGCTGGCGCGAGAAGGCAGCAGCGAGACGTGGCAAGGCCAT TGGGTCGCCGAGCGCGCCACCCTGTACCGCATCCTCATCGACGGCGCGCCGGCCGACCGCCAGCTGCATCGGCTGGACGT GCTGCCCGACCGCCCACCGCAGGTGCGTGTGCTCGCCCCCGAACAGAGCCTGGTGCTGTGGTCCCCGGCCAACCGCAGCT GGACGCTACGTTTCGAAGCCAGCGACGACTACGCCGTGGCCGCCAGCGCCGAGCTGCGCCTCACCCTGGCCCAGGGCAGC GGCGAGAACATCACCTTCAGCACCCAGCGCCGCACGCTAACCGGCAGCGGCCCGGCCCGGCAACGCGGCTTCGCCACCAC TGTGCAGCCACAGGCACTGGGCATGGCCGCGGGCGACGACCTGATTGCCCAGCTCATCGTCCACGACACCCGCCAGCCCG GCCCGCAGGAAGGCCGCAGCGCCAGTGTGATCCTGCGCTGGCCGCCGCCCGAACAGACCATGGCCGCCGGCCTGGAAGCC AGCGTCAAGCAGACCTTGCCCGCCTACTTCCGCAGCCAGCGCCAGATCATCATCGACGCGCAGGCACTGCTGAAGGAGAA ACCGCGCCTGGACGCGGCCAGCTTCCTCAAGCGCTCCGATGCCATCGGGGTGGACCAGCGCCTGCTGCGGCTGCGCTATG GCCAATTCCTCGGCGAAGAGAGCGAAGGCGCGCCGCAAGGTCCGCCGACTGCCGACGCGCCACCCACCAGCGACGCCCCC GCCGACGATTTACCCACCGCCGACATGCCCACCGCCGATGCGCCAAGCGCGCCGGCCGCTGCTTCGGACACGCACGCCGC GCATGACCACGACGCCCACGCCAGCGAGCCCGGCGCCGCCGCACTGGACGACCACGACCACGACCATGGCGGCAGCGACG GCCGGCCCGAGCGCAGCAGCTTCGGCCAGGCAGAGAACGTGCTGGCCGAATTCGGCCATACCCACGACCACGCCGAAGCC GCCACCCTGCTCGACCCGCAAACCCGCGCCCTGCTGCGCGCGGCGCTGGACCAGATGTGGCAATCCGAAGGCGAGCTGCG CCAGGGCCACCCCGAGCGCGCGCTGCCGTACGCCAACAAGGCGCTGGGCTTCATCAAACAGGTGCAGCAGGCCGAACGCA TCTACCTGGCGCGCGTGGGTACGCAGTTGCCGCCGATCGACCCCAGCCGGCGGCTGAGCGGCGATCGCGCCGGCCTGGGC GACCGTGCCGCCGGGTTGGACACCCGCCCGGCCCCGGACCCGTCCGCGCTGCAGCTGTGGGATGCGCTGGGCGAGGCAGC CCCGGTGCCCGACGCCACCCTGGCCCGCTACGCGCAGTGGCTGCAGACCCAGCACGACCGCCTGCACGACCCGCTGGGCC TGGCCGCCGCCGTGGAAACCCTGCGCGCCGAACCCGATTGCGCCCGCTGCCGCACCCAGCTGCGCCTCCAGGTCTGGCGC ACCCTGCTCGCCCCGTCGGGCAGCACCGCATCGCCGCGCCGCGCCCGACGCTCGGGGCCAGCGCTACCTGGATGCGCTGC GGCAGGAGATGCAGCCGTGAGTCCCGCCCTGATCCGCCTGCTCCCGGTGCACCGCTCGATCGGACCGAGGTGGTCTTTAG ACCTGGCAGCAGGCGGTCCGCCGTCGTGGGCGCGGACCGCATCGCCAAGGCTGTACGGCGGGCGCTTTCAGGATGCATTG CGCCCGGAGCACCAACCATGA
Upstream 100 bases:
>100_bases CCACCCCGCGACCGCTGGCGCCGTGGCTGATCGGCCTGGTGCTGCTGCTGTTTGCGCTCGAACGCTGGCTGGCCACCGCG CTGCGCCGGGCCACTCCCGC
Downstream 100 bases:
>100_bases CGCCCTCCTTGCCCTGGTTGGTCGGTGCGGCATTGCTGCTGATCGCCGTCATCGGCTGCGTGCGCCTGCTGCGGGCGCAC CACCGGCAGCCGTATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 806; Mature: 805
Protein sequence:
>806_residues MSTPALQRAWQAARRRQAAGVLLFGLPWAALPAALAWRAGAQVAVVVLLLLGLLALGGAALLAARRLDQAWLIRRLDRDA DLEDSSDLLFAPIAQLGPLQTLQRQRLEQRLRSTPRDLRPAWPWRRAWPWSVLGVLACGALLLWPQPATQRTPPTDRVAA ARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVSPAPRSVALRLTDGRTVALAREGSSETWQGH WVAERATLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPANRSWTLRFEASDDYAVAASAELRLTLAQGS GENITFSTQRRTLTGSGPARQRGFATTVQPQALGMAAGDDLIAQLIVHDTRQPGPQEGRSASVILRWPPPEQTMAAGLEA SVKQTLPAYFRSQRQIIIDAQALLKEKPRLDAASFLKRSDAIGVDQRLLRLRYGQFLGEESEGAPQGPPTADAPPTSDAP ADDLPTADMPTADAPSAPAAASDTHAAHDHDAHASEPGAAALDDHDHDHGGSDGRPERSSFGQAENVLAEFGHTHDHAEA ATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGTQLPPIDPSRRLSGDRAGLG DRAAGLDTRPAPDPSALQLWDALGEAAPVPDATLARYAQWLQTQHDRLHDPLGLAAAVETLRAEPDCARCRTQLRLQVWR TLLAPSGSTASPRRARRSGPALPGCAAAGDAAVSPALIRLLPVHRSIGPRWSLDLAAGGPPSWARTASPRLYGGRFQDAL RPEHQP
Sequences:
>Translated_806_residues MSTPALQRAWQAARRRQAAGVLLFGLPWAALPAALAWRAGAQVAVVVLLLLGLLALGGAALLAARRLDQAWLIRRLDRDA DLEDSSDLLFAPIAQLGPLQTLQRQRLEQRLRSTPRDLRPAWPWRRAWPWSVLGVLACGALLLWPQPATQRTPPTDRVAA ARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVSPAPRSVALRLTDGRTVALAREGSSETWQGH WVAERATLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPANRSWTLRFEASDDYAVAASAELRLTLAQGS GENITFSTQRRTLTGSGPARQRGFATTVQPQALGMAAGDDLIAQLIVHDTRQPGPQEGRSASVILRWPPPEQTMAAGLEA SVKQTLPAYFRSQRQIIIDAQALLKEKPRLDAASFLKRSDAIGVDQRLLRLRYGQFLGEESEGAPQGPPTADAPPTSDAP ADDLPTADMPTADAPSAPAAASDTHAAHDHDAHASEPGAAALDDHDHDHGGSDGRPERSSFGQAENVLAEFGHTHDHAEA ATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGTQLPPIDPSRRLSGDRAGLG DRAAGLDTRPAPDPSALQLWDALGEAAPVPDATLARYAQWLQTQHDRLHDPLGLAAAVETLRAEPDCARCRTQLRLQVWR TLLAPSGSTASPRRARRSGPALPGCAAAGDAAVSPALIRLLPVHRSIGPRWSLDLAAGGPPSWARTASPRLYGGRFQDAL RPEHQP >Mature_805_residues STPALQRAWQAARRRQAAGVLLFGLPWAALPAALAWRAGAQVAVVVLLLLGLLALGGAALLAARRLDQAWLIRRLDRDAD LEDSSDLLFAPIAQLGPLQTLQRQRLEQRLRSTPRDLRPAWPWRRAWPWSVLGVLACGALLLWPQPATQRTPPTDRVAAA RASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVSPAPRSVALRLTDGRTVALAREGSSETWQGHW VAERATLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPANRSWTLRFEASDDYAVAASAELRLTLAQGSG ENITFSTQRRTLTGSGPARQRGFATTVQPQALGMAAGDDLIAQLIVHDTRQPGPQEGRSASVILRWPPPEQTMAAGLEAS VKQTLPAYFRSQRQIIIDAQALLKEKPRLDAASFLKRSDAIGVDQRLLRLRYGQFLGEESEGAPQGPPTADAPPTSDAPA DDLPTADMPTADAPSAPAAASDTHAAHDHDAHASEPGAAALDDHDHDHGGSDGRPERSSFGQAENVLAEFGHTHDHAEAA TLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGTQLPPIDPSRRLSGDRAGLGD RAAGLDTRPAPDPSALQLWDALGEAAPVPDATLARYAQWLQTQHDRLHDPLGLAAAVETLRAEPDCARCRTQLRLQVWRT LLAPSGSTASPRRARRSGPALPGCAAAGDAAVSPALIRLLPVHRSIGPRWSLDLAAGGPPSWARTASPRLYGGRFQDALR PEHQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86951; Mature: 86820
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPALQRAWQAARRRQAAGVLLFGLPWAALPAALAWRAGAQVAVVVLLLLGLLALGGAA CCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLAARRLDQAWLIRRLDRDADLEDSSDLLFAPIAQLGPLQTLQRQRLEQRLRSTPRDLRP HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC AWPWRRAWPWSVLGVLACGALLLWPQPATQRTPPTDRVAAARASSGAPTLRQAQLRSSPP CCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCC AYTGLPAARLPGLDAKVPAGTRLDWQLQVSPAPRSVALRLTDGRTVALAREGSSETWQGH CCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCC WVAERATLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPANRSWTLRFEA CHHHHHEEEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEEEEC SDDYAVAASAELRLTLAQGSGENITFSTQRRTLTGSGPARQRGFATTVQPQALGMAAGDD CCCEEEEECCEEEEEEECCCCCCEEEECCCCEECCCCCHHHCCCCCCCCHHHHCCCCCHH LIAQLIVHDTRQPGPQEGRSASVILRWPPPEQTMAAGLEASVKQTLPAYFRSQRQIIIDA HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH QALLKEKPRLDAASFLKRSDAIGVDQRLLRLRYGQFLGEESEGAPQGPPTADAPPTSDAP HHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADDLPTADMPTADAPSAPAAASDTHAAHDHDAHASEPGAAALDDHDHDHGGSDGRPERSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FGQAENVLAEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANK CCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHH ALGFIKQVQQAERIYLARVGTQLPPIDPSRRLSGDRAGLGDRAAGLDTRPAPDPSALQLW HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DALGEAAPVPDATLARYAQWLQTQHDRLHDPLGLAAAVETLRAEPDCARCRTQLRLQVWR HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TLLAPSGSTASPRRARRSGPALPGCAAAGDAAVSPALIRLLPVHRSIGPRWSLDLAAGGP HHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC PSWARTASPRLYGGRFQDALRPEHQP CCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure STPALQRAWQAARRRQAAGVLLFGLPWAALPAALAWRAGAQVAVVVLLLLGLLALGGAA CCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLAARRLDQAWLIRRLDRDADLEDSSDLLFAPIAQLGPLQTLQRQRLEQRLRSTPRDLRP HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC AWPWRRAWPWSVLGVLACGALLLWPQPATQRTPPTDRVAAARASSGAPTLRQAQLRSSPP CCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCC AYTGLPAARLPGLDAKVPAGTRLDWQLQVSPAPRSVALRLTDGRTVALAREGSSETWQGH CCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCC WVAERATLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPANRSWTLRFEA CHHHHHEEEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEEEEC SDDYAVAASAELRLTLAQGSGENITFSTQRRTLTGSGPARQRGFATTVQPQALGMAAGDD CCCEEEEECCEEEEEEECCCCCCEEEECCCCEECCCCCHHHCCCCCCCCHHHHCCCCCHH LIAQLIVHDTRQPGPQEGRSASVILRWPPPEQTMAAGLEASVKQTLPAYFRSQRQIIIDA HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH QALLKEKPRLDAASFLKRSDAIGVDQRLLRLRYGQFLGEESEGAPQGPPTADAPPTSDAP HHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADDLPTADMPTADAPSAPAAASDTHAAHDHDAHASEPGAAALDDHDHDHGGSDGRPERSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FGQAENVLAEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANK CCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHH ALGFIKQVQQAERIYLARVGTQLPPIDPSRRLSGDRAGLGDRAAGLDTRPAPDPSALQLW HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DALGEAAPVPDATLARYAQWLQTQHDRLHDPLGLAAAVETLRAEPDCARCRTQLRLQVWR HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TLLAPSGSTASPRRARRSGPALPGCAAAGDAAVSPALIRLLPVHRSIGPRWSLDLAAGGP HHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC PSWARTASPRLYGGRFQDALRPEHQP CCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA