Click here to switch to the map view.

The map label for this gene is 78045628

Identifier: 78045628

GI number: 78045628

Start: 83064

End: 84233

Strand: Reverse

Name: 78045628

Synonym: XCV0072

Alternate gene names: NA

Gene position: 84233-83064 (Counterclockwise)

Preceding gene: 78045630

Following gene: 78045627

Centisome position: 1.63

GC content: 71.79

Gene sequence:

>1170_bases
ATGATGCTCGTCACTGTGTTGCTGCTCGCCGCCGGACTGCTAGGTGCCGTTGTGCTCGCCGGAGGTCTGTGGTGGTTGCT
GGCGCGACGCCGCGACGCCAAGGCCGATGACATCGCGACGCCGTCGGCAAGCAATGCGTCCACAGCACATGCGTCGCCCT
CGCCGATTGCACCGGCACCATCGCCTGCCGCGCCGCTGCAGCAGCCCGTGCCGCCGCCCGCTGCGCAGACATTGCAGATC
GAACCACCGCCGATGCGCCCGCTGTTGCGGCGCATGTATGCGGCGGTGATGGCCACGCCATCGCTGGCCGAGGGCACGCT
GCCCGGCGACCCAGCCCAGGCCGAGGTGTTGGCCGCCGTCGCCGCCGCGCTCGAACAAGTCGACCTGCGGCCGCAATTGC
TGCCGCGTCGCCCGCACCTGTTGCCGCAGCTGATGCGTGCGGTGAACGATCCCGATGCCTCCGGCCGCGGCATCGCCGCG
ATCATCGCGCAGGACCCCGCGTTGGCAGCCAACCTGCTGCGCATCGCCAACAGTGCGCTGTACCGCCCGCAAGGCGGCCC
GCTGGAAAGCCTGGAGCGCGCGGTCGTGCATATCGGCACCGAAGGCGTGCGCCAGATCGTCGCCGCGGCCGTCATGCAGC
CGGTGCTGAGCCTGGATGGCGGGCTGTACTCACGCCTGCCTGCCGCCGTGTGGGATTACGCCCTGCGCACCGCCACCGCC
GCTGCCGCCTACCTGCGCGAACGCGGCGGCGACACCTTGTCCGGTCAACTCGCCGGCTTGCTGCAGGGCCTGGGCGCGAT
CGTGATCCTGCGCGTCCTGCGCGACACCTACGCCGACCGCCGCGGCGTGCCCTACAACCTGGAGGTAGCCGCCGCCCTGG
TCGAACGCCATACCGCCGCAGTGGCCAAGACCATTGCCACCGCCTGGGACCTGCCGCCACAGCTCGGCACCGCGCTGGAC
GAACAGCGCCCCGAACACGACACCAGCCTGCTCGCCACCCCGCTCGGCCTGGCCCTGCGCTACGGCCGCCTCGCCGCCGC
CCTGGCCATGCTCGCCCGCCACGGTGCCGAGCACGAAGACCACGCGCTCGGCATCCTGGCCACCCTGCAGCCGGACAGCG
ACGCCAACGCCGCACTGTGGCAGCGGCTGGTGGCAGCGAGCGTGGAGTGA

Upstream 100 bases:

>100_bases
CTTGCCCGACCGTCCGACGGCAATGCCCAGCGACACACGCTCGCATTGCCGCCGCGACCGGCTTCGCGGATAGTCGCCGC
ACTGATCAGACGATTTTTCC

Downstream 100 bases:

>100_bases
GTTGCAGTAACGCTACGGCCGTTGCTTACCGCAGCATCCCAGCGTCAATCAGCCGATGACCATGTCCACTGCATGCCTTG
AAGATTCGGCTTAGCCAGGC

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MMLVTVLLLAAGLLGAVVLAGGLWWLLARRRDAKADDIATPSASNASTAHASPSPIAPAPSPAAPLQQPVPPPAAQTLQI
EPPPMRPLLRRMYAAVMATPSLAEGTLPGDPAQAEVLAAVAAALEQVDLRPQLLPRRPHLLPQLMRAVNDPDASGRGIAA
IIAQDPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLDGGLYSRLPAAVWDYALRTATA
AAAYLRERGGDTLSGQLAGLLQGLGAIVILRVLRDTYADRRGVPYNLEVAAALVERHTAAVAKTIATAWDLPPQLGTALD
EQRPEHDTSLLATPLGLALRYGRLAAALAMLARHGAEHEDHALGILATLQPDSDANAALWQRLVAASVE

Sequences:

>Translated_389_residues
MMLVTVLLLAAGLLGAVVLAGGLWWLLARRRDAKADDIATPSASNASTAHASPSPIAPAPSPAAPLQQPVPPPAAQTLQI
EPPPMRPLLRRMYAAVMATPSLAEGTLPGDPAQAEVLAAVAAALEQVDLRPQLLPRRPHLLPQLMRAVNDPDASGRGIAA
IIAQDPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLDGGLYSRLPAAVWDYALRTATA
AAAYLRERGGDTLSGQLAGLLQGLGAIVILRVLRDTYADRRGVPYNLEVAAALVERHTAAVAKTIATAWDLPPQLGTALD
EQRPEHDTSLLATPLGLALRYGRLAAALAMLARHGAEHEDHALGILATLQPDSDANAALWQRLVAASVE
>Mature_389_residues
MMLVTVLLLAAGLLGAVVLAGGLWWLLARRRDAKADDIATPSASNASTAHASPSPIAPAPSPAAPLQQPVPPPAAQTLQI
EPPPMRPLLRRMYAAVMATPSLAEGTLPGDPAQAEVLAAVAAALEQVDLRPQLLPRRPHLLPQLMRAVNDPDASGRGIAA
IIAQDPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLDGGLYSRLPAAVWDYALRTATA
AAAYLRERGGDTLSGQLAGLLQGLGAIVILRVLRDTYADRRGVPYNLEVAAALVERHTAAVAKTIATAWDLPPQLGTALD
EQRPEHDTSLLATPLGLALRYGRLAAALAMLARHGAEHEDHALGILATLQPDSDANAALWQRLVAASVE

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40697; Mature: 40697

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLVTVLLLAAGLLGAVVLAGGLWWLLARRRDAKADDIATPSASNASTAHASPSPIAPAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPAAPLQQPVPPPAAQTLQIEPPPMRPLLRRMYAAVMATPSLAEGTLPGDPAQAEVLAAV
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
AAALEQVDLRPQLLPRRPHLLPQLMRAVNDPDASGRGIAAIIAQDPALAANLLRIANSAL
HHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
YRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLDGGLYSRLPAAVWDYALRTATA
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAAYLRERGGDTLSGQLAGLLQGLGAIVILRVLRDTYADRRGVPYNLEVAAALVERHTAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VAKTIATAWDLPPQLGTALDEQRPEHDTSLLATPLGLALRYGRLAAALAMLARHGAEHED
HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HALGILATLQPDSDANAALWQRLVAASVE
CCEEEEEEECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMLVTVLLLAAGLLGAVVLAGGLWWLLARRRDAKADDIATPSASNASTAHASPSPIAPAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPAAPLQQPVPPPAAQTLQIEPPPMRPLLRRMYAAVMATPSLAEGTLPGDPAQAEVLAAV
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
AAALEQVDLRPQLLPRRPHLLPQLMRAVNDPDASGRGIAAIIAQDPALAANLLRIANSAL
HHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
YRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLDGGLYSRLPAAVWDYALRTATA
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAAYLRERGGDTLSGQLAGLLQGLGAIVILRVLRDTYADRRGVPYNLEVAAALVERHTAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VAKTIATAWDLPPQLGTALDEQRPEHDTSLLATPLGLALRYGRLAAALAMLARHGAEHED
HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HALGILATLQPDSDANAALWQRLVAASVE
CCEEEEEEECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA