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The map label for this gene is 78045627

Identifier: 78045627

GI number: 78045627

Start: 82639

End: 82827

Strand: Reverse

Name: 78045627

Synonym: XCV0071

Alternate gene names: NA

Gene position: 82827-82639 (Counterclockwise)

Preceding gene: 78045628

Following gene: 78045626

Centisome position: 1.6

GC content: 58.2

Gene sequence:

>189_bases
ATGGATAAGAATCGTATCGACGGTGCCGCCAAGCAGGTCAAGGGCTCGGTCAAGGAAGCCATCGGCCGCGTCACTGGCGA
CAAGAGCACCGAACTGGAAGGCGCCGCCGAAAAGAATGTTGGCAAGGTGCAGCGCAAGGCCGGCGAAGTTGCCGATGACG
TGCGCGACGCTGTCAAATCGAATAAGTAA

Upstream 100 bases:

>100_bases
ATTAGTGCATTCGCAACTGGGGCATCCGGATGCAAGCGCACATCATGCTCACGCCGGCGCGCACAGACTGGCCGGGTTCC
CCAAACGACGAGCAACATCC

Downstream 100 bases:

>100_bases
ATCGGGTGCATGATCGGTAGGCGGATGCCTGCCGTGCTGTAAACCGCATCAGGACTATGCGTCGCGTACATCGCACGCAG
TGATGTAGCGCAAGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKSNK

Sequences:

>Translated_62_residues
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKSNK
>Mature_62_residues
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKSNK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6554; Mature: 6554

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NK
CC
>Mature Secondary Structure
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]