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The map label for this gene is etfB1 [H]

Identifier: 78045023

GI number: 78045023

Start: 1182464

End: 1183225

Strand: Direct

Name: etfB1 [H]

Synonym: CHY_1325

Alternate gene names: 78045023

Gene position: 1182464-1183225 (Clockwise)

Preceding gene: 78043112

Following gene: 78043408

Centisome position: 49.24

GC content: 51.44

Gene sequence:

>762_bases
GTGAAACTGGTAGTCCTTTTAAAGCAAACCTTTGACACCGAAGCCAAGATAGTATTAAAGGACGGGAAAATTGACGACAG
CGGGGTAACCTTAATCATTAACCCCTACGACGAATTTGCGGTAGAAGAAGCACTAAGGATCAAGGAAAAACTTGGGCAGG
GGGAGGTAGTGGTAGTATCGGCGGGGAGTGATAGGGCTCAGGAAGCATTACGGCAGGCCTTAGCCATGGGAGCCGACCGG
GCGGTACTGGTCAAAACCGACGGCCTGCAGTTAGATGAAATGGTGGTAGCCGAAGTACTGGCGAAAGTGCTGCAGCAAAT
GGAATACGACCTTATTTTAGCCGGCTGGCGGGCCATTGACGACAGTTCCGCCCAGGTAGGGGTACGGGTAGCCGAGATTT
TAGGCTTACCCCAAATTAACCTTGTCACCAAATTAGAAGTAGGGGAAGGCAAGATTACCGGCCACCGGGAAATCGAAGGT
GGTACCGAAGTGGTAGAAGTGCCTCTACCGGCCCTTGTTACCGCCCAGCGGGGGTTAAATGAGCCGCGGTATCCTTCCAT
GAAAGGCATCATGCAGGCCAAGAAAAAAGAGTTAAAGGTCATAAACGCCGCAGACCTGGGGGTAAATGCCACGCCCAAGG
TAGAGATAAAAGAAATCTTTCTTCCCAAAGGCAAGCAGGCGGGGAAAATCTTCACCGATGAGCCGGCGGTAGCGGTAGCC
AAGTTAGTCAAAGCCTTACGGGAAGAAGCCAAGGTAATATAG

Upstream 100 bases:

>100_bases
AAAAGCTTTAATAAATATTGCCCACCCTGATTTTAGAGATGAGTTAAAGTTTCAAGCCAAAAAGTTAAATATTTTATAAA
AACATGAGGAGGGAGATTAG

Downstream 100 bases:

>100_bases
GGGGTGGAGCTAATGGGTAAAGTATGGGTAGTAGCAGAGCAAAGGGAAGGTAAGTTAAAGAAAGTAACCTTTGAGATGGT
AACTTTGGCCCGGCAAATAG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKLVVLLKQTFDTEAKIVLKDGKIDDSGVTLIINPYDEFAVEEALRIKEKLGQGEVVVVSAGSDRAQEALRQALAMGADR
AVLVKTDGLQLDEMVVAEVLAKVLQQMEYDLILAGWRAIDDSSAQVGVRVAEILGLPQINLVTKLEVGEGKITGHREIEG
GTEVVEVPLPALVTAQRGLNEPRYPSMKGIMQAKKKELKVINAADLGVNATPKVEIKEIFLPKGKQAGKIFTDEPAVAVA
KLVKALREEAKVI

Sequences:

>Translated_253_residues
MKLVVLLKQTFDTEAKIVLKDGKIDDSGVTLIINPYDEFAVEEALRIKEKLGQGEVVVVSAGSDRAQEALRQALAMGADR
AVLVKTDGLQLDEMVVAEVLAKVLQQMEYDLILAGWRAIDDSSAQVGVRVAEILGLPQINLVTKLEVGEGKITGHREIEG
GTEVVEVPLPALVTAQRGLNEPRYPSMKGIMQAKKKELKVINAADLGVNATPKVEIKEIFLPKGKQAGKIFTDEPAVAVA
KLVKALREEAKVI
>Mature_253_residues
MKLVVLLKQTFDTEAKIVLKDGKIDDSGVTLIINPYDEFAVEEALRIKEKLGQGEVVVVSAGSDRAQEALRQALAMGADR
AVLVKTDGLQLDEMVVAEVLAKVLQQMEYDLILAGWRAIDDSSAQVGVRVAEILGLPQINLVTKLEVGEGKITGHREIEG
GTEVVEVPLPALVTAQRGLNEPRYPSMKGIMQAKKKELKVINAADLGVNATPKVEIKEIFLPKGKQAGKIFTDEPAVAVA
KLVKALREEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=244, Percent_Identity=40.5737704918033, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI62420877, Length=215, Percent_Identity=43.2558139534884, Blast_Score=150, Evalue=1e-36,
Organism=Escherichia coli, GI87081682, Length=236, Percent_Identity=33.4745762711864, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI2367123, Length=256, Percent_Identity=26.5625, Blast_Score=75, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25141345, Length=248, Percent_Identity=41.1290322580645, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321646, Length=211, Percent_Identity=36.9668246445498, Blast_Score=123, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=39.4308943089431, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=39.4308943089431, Blast_Score=145, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27367; Mature: 27367

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVVLLKQTFDTEAKIVLKDGKIDDSGVTLIINPYDEFAVEEALRIKEKLGQGEVVVVS
CEEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEE
AGSDRAQEALRQALAMGADRAVLVKTDGLQLDEMVVAEVLAKVLQQMEYDLILAGWRAID
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCEECC
DSSAQVGVRVAEILGLPQINLVTKLEVGEGKITGHREIEGGTEVVEVPLPALVTAQRGLN
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCCEEEEECCCHHHHHHHCCC
EPRYPSMKGIMQAKKKELKVINAADLGVNATPKVEIKEIFLPKGKQAGKIFTDEPAVAVA
CCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHH
KLVKALREEAKVI
HHHHHHHHHHCCC
>Mature Secondary Structure
MKLVVLLKQTFDTEAKIVLKDGKIDDSGVTLIINPYDEFAVEEALRIKEKLGQGEVVVVS
CEEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEE
AGSDRAQEALRQALAMGADRAVLVKTDGLQLDEMVVAEVLAKVLQQMEYDLILAGWRAID
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCEECC
DSSAQVGVRVAEILGLPQINLVTKLEVGEGKITGHREIEGGTEVVEVPLPALVTAQRGLN
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCCEEEEECCCHHHHHHHCCC
EPRYPSMKGIMQAKKKELKVINAADLGVNATPKVEIKEIFLPKGKQAGKIFTDEPAVAVA
CCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHH
KLVKALREEAKVI
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]