| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78045019
Identifier: 78045019
GI number: 78045019
Start: 1902198
End: 1904210
Strand: Direct
Name: 78045019
Synonym: CHY_2121
Alternate gene names: NA
Gene position: 1902198-1904210 (Clockwise)
Preceding gene: 78043103
Following gene: 78044240
Centisome position: 79.21
GC content: 42.32
Gene sequence:
>2013_bases ATGCTTTTTGAACCAAACAAAGTAATCGGTATTTTCAAAGGTTTTACCGAAAAAGGTCTTGAATTTGCCGCAGAATTAGT TTTACCTTACAACGCTTCCATGATTGAACGCCCGCAATTAGGTCAGTTTATCTTAATTGAACTGGGCTCGGAAATAGAAG CTGCCCTGGGGCGCATTACCAAATTTATCCCCACCGGGCTCTTAACTACTCCCGAAGGGGAAGAATATTTTAACGCTTTA GGCCGACGGTCCGAACCCATTCCCGAAGATTTAAAAGAACAAAAACTTCGCTACCGGGTATATGTAAAGCTTTTAGGTGC AGTAAAAATTGATGATAACGGAAAAATCGTTTATGTCCCATCCCAGCGCAGACTTCCCCATTTAGGCTCAAAAGTAGCCT GGCCCAGTGATGAAGTGTTGAGGGAAATTTGCAGTTTAAACCAGGGCAACACCGAAATCGGTCACTATGTTCTGGGAGAG TTTGTTTATTGCGGCAGTAAAGAAGAACCAGATAATCCTATCTTCCGCTCTTTGGACCCCAAGCTTCCTATAAGCTTTGA TATAAAGAACCTTATTGCCCGCAGGACTTTAGTCTTTGCCCGGGCCGGCTATGGAAAATCAAATCTTATGAAACTTTTAC TTTCTGAACTTTACCGCAAAACCCCTACCACCGAAAAAGGTTTAAAAGTTGGTACTCTGGTTTTTGATGCCGATGGTGAG TATTTCTGGCCAGACCAGGTTAAAAATAGGCCGGGGCTTTGTAACGTTCCCCATCTGGTAGAAAAAATAGTTATCTTCAC CAACCGGCCTGCTCCCAATGAATATTACCAAAAATTCATTGCCGGACCGGTTACCCTTAATGTAGCTGAATTTCGTCCAC AGGATGTAATCCACCTTTGTATTCCACCGGAAAAGCAAACCAATCAAAACGTGGTAAAACTTCGTTCTTTAAGCCAGAGT TCCTGGGAACAAATGGTAGAATTAATTCATAAAGCCAGTTTGCAGGCCCCCGACGAAAAAATTGCCGAACTTTTAGGATA CAGTCCTGAACAGGCAAACGTCTACCAAGCCGAAATATCCGCCGCTAAAAGTAACATGTTTAATATCATAAAAACTCTGC ACCATGACCCCGACAGTAATTTAACCGAAGGGGTTAAAAAAGCTCTATCCGAAGGCGCCCTGGTAATAGTGGACATAAGC CTTTTAAGTTCCTCGGCCAGTGAAAAACTGGCAGGGCTTTTACTCAAAAAAATCTTCGACCACAACCAGGAGAACTTCAC CAGCGGCCAGCCCATCATCCCGGCCATAGTAGTATTGGAAGAAGCCCAATCGGTCCTGGGAAAGAATCTCGACGATAGCA GTCCCTTTGTAGAATGGGTTAAAGAAGGCCGGAAATACGACCTTGGTGCGATCTTAATTACCCAGCAGCCCGGCTCCATA GCTCCGGAAATCCTAAGTCAGGCAGACAACTGGTTTGTCTTCCACCTACTATCGGAAAACGATGCTCAAACTTTAAACCG TTTTAATTCCCATTTCAGTGATGATATTTTGGCCCATTTAATTGGCGAACCCATTCAGGGCAACTGCTATATGTGGAGTG CTCCCCGGCAGCCTTTTGTGCTCCCGGTCAGGGTTAAAAACTTTGAAAAGCTCTACTCCGCCTCCTGCCAGACTCCCTTT GATAATACTTTAGTTGAAACAGTTATTAAAGCCACACAGGAAAAAACGCGGAAAAAGTTAATCGCTATTTATAACATTCT TTTACAAAACAAAACCAGATATCGTTATGACCAGAATACCGTTTCCTTGAGGGCCGATATTTTTTATCACCAAATTGTCG AAGCCTTTAAAAATCGTGGTATTAACGAAATCCCTTCATACGATAAAATTTTAGATTATTTAAGGCGGATTTTTGGTAAT TCTGAAGTTTACCGGGATAAAAACAGCGACAATCAGGATATCTTTAAAATAAACCTTAACGCCTGGAATAAAAAAATAGA AAAAAAGCAGTAA
Upstream 100 bases:
>100_bases AGGCATTACGCCAGTGCATTTAATAAAGGTAACGGAGAAAAATTAGAGCGGTTTAAATACCTTGGTGAAAAGTTAAATAC CTTCTTTAAGGGGGAATAAA
Downstream 100 bases:
>100_bases AAAAGCCCCAGATTAATATTAGGGCCGAAGACTTTTTTAACCTCATTTTAATAAAAAAAATAACATTGGTTATCGGCTTT TCAATAAAACTTTTGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MLFEPNKVIGIFKGFTEKGLEFAAELVLPYNASMIERPQLGQFILIELGSEIEAALGRITKFIPTGLLTTPEGEEYFNAL GRRSEPIPEDLKEQKLRYRVYVKLLGAVKIDDNGKIVYVPSQRRLPHLGSKVAWPSDEVLREICSLNQGNTEIGHYVLGE FVYCGSKEEPDNPIFRSLDPKLPISFDIKNLIARRTLVFARAGYGKSNLMKLLLSELYRKTPTTEKGLKVGTLVFDADGE YFWPDQVKNRPGLCNVPHLVEKIVIFTNRPAPNEYYQKFIAGPVTLNVAEFRPQDVIHLCIPPEKQTNQNVVKLRSLSQS SWEQMVELIHKASLQAPDEKIAELLGYSPEQANVYQAEISAAKSNMFNIIKTLHHDPDSNLTEGVKKALSEGALVIVDIS LLSSSASEKLAGLLLKKIFDHNQENFTSGQPIIPAIVVLEEAQSVLGKNLDDSSPFVEWVKEGRKYDLGAILITQQPGSI APEILSQADNWFVFHLLSENDAQTLNRFNSHFSDDILAHLIGEPIQGNCYMWSAPRQPFVLPVRVKNFEKLYSASCQTPF DNTLVETVIKATQEKTRKKLIAIYNILLQNKTRYRYDQNTVSLRADIFYHQIVEAFKNRGINEIPSYDKILDYLRRIFGN SEVYRDKNSDNQDIFKINLNAWNKKIEKKQ
Sequences:
>Translated_670_residues MLFEPNKVIGIFKGFTEKGLEFAAELVLPYNASMIERPQLGQFILIELGSEIEAALGRITKFIPTGLLTTPEGEEYFNAL GRRSEPIPEDLKEQKLRYRVYVKLLGAVKIDDNGKIVYVPSQRRLPHLGSKVAWPSDEVLREICSLNQGNTEIGHYVLGE FVYCGSKEEPDNPIFRSLDPKLPISFDIKNLIARRTLVFARAGYGKSNLMKLLLSELYRKTPTTEKGLKVGTLVFDADGE YFWPDQVKNRPGLCNVPHLVEKIVIFTNRPAPNEYYQKFIAGPVTLNVAEFRPQDVIHLCIPPEKQTNQNVVKLRSLSQS SWEQMVELIHKASLQAPDEKIAELLGYSPEQANVYQAEISAAKSNMFNIIKTLHHDPDSNLTEGVKKALSEGALVIVDIS LLSSSASEKLAGLLLKKIFDHNQENFTSGQPIIPAIVVLEEAQSVLGKNLDDSSPFVEWVKEGRKYDLGAILITQQPGSI APEILSQADNWFVFHLLSENDAQTLNRFNSHFSDDILAHLIGEPIQGNCYMWSAPRQPFVLPVRVKNFEKLYSASCQTPF DNTLVETVIKATQEKTRKKLIAIYNILLQNKTRYRYDQNTVSLRADIFYHQIVEAFKNRGINEIPSYDKILDYLRRIFGN SEVYRDKNSDNQDIFKINLNAWNKKIEKKQ >Mature_670_residues MLFEPNKVIGIFKGFTEKGLEFAAELVLPYNASMIERPQLGQFILIELGSEIEAALGRITKFIPTGLLTTPEGEEYFNAL GRRSEPIPEDLKEQKLRYRVYVKLLGAVKIDDNGKIVYVPSQRRLPHLGSKVAWPSDEVLREICSLNQGNTEIGHYVLGE FVYCGSKEEPDNPIFRSLDPKLPISFDIKNLIARRTLVFARAGYGKSNLMKLLLSELYRKTPTTEKGLKVGTLVFDADGE YFWPDQVKNRPGLCNVPHLVEKIVIFTNRPAPNEYYQKFIAGPVTLNVAEFRPQDVIHLCIPPEKQTNQNVVKLRSLSQS SWEQMVELIHKASLQAPDEKIAELLGYSPEQANVYQAEISAAKSNMFNIIKTLHHDPDSNLTEGVKKALSEGALVIVDIS LLSSSASEKLAGLLLKKIFDHNQENFTSGQPIIPAIVVLEEAQSVLGKNLDDSSPFVEWVKEGRKYDLGAILITQQPGSI APEILSQADNWFVFHLLSENDAQTLNRFNSHFSDDILAHLIGEPIQGNCYMWSAPRQPFVLPVRVKNFEKLYSASCQTPF DNTLVETVIKATQEKTRKKLIAIYNILLQNKTRYRYDQNTVSLRADIFYHQIVEAFKNRGINEIPSYDKILDYLRRIFGN SEVYRDKNSDNQDIFKINLNAWNKKIEKKQ
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76019; Mature: 76019
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEPNKVIGIFKGFTEKGLEFAAELVLPYNASMIERPQLGQFILIELGSEIEAALGRIT CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH KFIPTGLLTTPEGEEYFNALGRRSEPIPEDLKEQKLRYRVYVKLLGAVKIDDNGKIVYVP HHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC SQRRLPHLGSKVAWPSDEVLREICSLNQGNTEIGHYVLGEFVYCGSKEEPDNPIFRSLDP CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCC KLPISFDIKNLIARRTLVFARAGYGKSNLMKLLLSELYRKTPTTEKGLKVGTLVFDADGE CCCCEECHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC YFWPDQVKNRPGLCNVPHLVEKIVIFTNRPAPNEYYQKFIAGPVTLNVAEFRPQDVIHLC EECCHHHCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHCCCEEEEHHHCCCCCEEEEE IPPEKQTNQNVVKLRSLSQSSWEQMVELIHKASLQAPDEKIAELLGYSPEQANVYQAEIS CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH AAKSNMFNIIKTLHHDPDSNLTEGVKKALSEGALVIVDISLLSSSASEKLAGLLLKKIFD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHHHHHHHHHC HNQENFTSGQPIIPAIVVLEEAQSVLGKNLDDSSPFVEWVKEGRKYDLGAILITQQPGSI CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEECEEEEEECCCCCH APEILSQADNWFVFHLLSENDAQTLNRFNSHFSDDILAHLIGEPIQGNCYMWSAPRQPFV HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCE LPVRVKNFEKLYSASCQTPFDNTLVETVIKATQEKTRKKLIAIYNILLQNKTRYRYDQNT EEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC VSLRADIFYHQIVEAFKNRGINEIPSYDKILDYLRRIFGNSEVYRDKNSDNQDIFKINLN EEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECC AWNKKIEKKQ HHHHHHCCCC >Mature Secondary Structure MLFEPNKVIGIFKGFTEKGLEFAAELVLPYNASMIERPQLGQFILIELGSEIEAALGRIT CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH KFIPTGLLTTPEGEEYFNALGRRSEPIPEDLKEQKLRYRVYVKLLGAVKIDDNGKIVYVP HHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC SQRRLPHLGSKVAWPSDEVLREICSLNQGNTEIGHYVLGEFVYCGSKEEPDNPIFRSLDP CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCC KLPISFDIKNLIARRTLVFARAGYGKSNLMKLLLSELYRKTPTTEKGLKVGTLVFDADGE CCCCEECHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC YFWPDQVKNRPGLCNVPHLVEKIVIFTNRPAPNEYYQKFIAGPVTLNVAEFRPQDVIHLC EECCHHHCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHCCCEEEEHHHCCCCCEEEEE IPPEKQTNQNVVKLRSLSQSSWEQMVELIHKASLQAPDEKIAELLGYSPEQANVYQAEIS CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH AAKSNMFNIIKTLHHDPDSNLTEGVKKALSEGALVIVDISLLSSSASEKLAGLLLKKIFD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHHHHHHHHHC HNQENFTSGQPIIPAIVVLEEAQSVLGKNLDDSSPFVEWVKEGRKYDLGAILITQQPGSI CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEECEEEEEECCCCCH APEILSQADNWFVFHLLSENDAQTLNRFNSHFSDDILAHLIGEPIQGNCYMWSAPRQPFV HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCE LPVRVKNFEKLYSASCQTPFDNTLVETVIKATQEKTRKKLIAIYNILLQNKTRYRYDQNT EEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC VSLRADIFYHQIVEAFKNRGINEIPSYDKILDYLRRIFGNSEVYRDKNSDNQDIFKINLN EEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECC AWNKKIEKKQ HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA