| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043103
Identifier: 78043103
GI number: 78043103
Start: 1901045
End: 1902196
Strand: Direct
Name: 78043103
Synonym: CHY_2120
Alternate gene names: NA
Gene position: 1901045-1902196 (Clockwise)
Preceding gene: 78045108
Following gene: 78045019
Centisome position: 79.16
GC content: 40.71
Gene sequence:
>1152_bases TTGCTATACGACCTTGATATCACCGATTTTTTAAAAAAACTTTCCTATCTTCAGAGCTATGAAAAACAACTTTTGGAACG TTTTTGCAGTTACGCTCGCCAGTTAAAACAAAATTTAAAGCCAATTAGACCCTACACCACTTCGGCCATTTCCATCGTTG CCTCCGATGGTGGAGATAACCGGATATATTTCAACCCTGCGGTCTATGAGTTTGTCCGGGTTGCCTGCTCCATCTGGGAT AAACCTTACTTTGATGTTTTTTCCTCCAGTGCCGGAGTTGAGCAATTTATTGCCCGAACCAAACCCGGAGAGTACGAATT TGGTCCGTTAAGAAGATTGTGTCAGGATTTAGGACTGGAAGTTACTGAACTTTCCCATCTTTTTACAAAGTTCAACAACC CCCGGCAATTTACCCTTTTAATGCGTGCCTATCGCGAAATAATCGAATGGGCCGTACTTTATGATCTTTTAAATATTGAA AAACCTTTTCCTTTAAAGCAAGTAATTTTCATTCGTGATGGCCTCTTACGTTCTTTTGTTTTTAAGTGGGAAGTCTTTGC TAAACTCGATGATTTATTTAGAAAGAAAATTTCCAAATTAAAAAACCTGGGGATCGAGGCTTCTATTGTAGGCATTGCCA AACGAAGTGCAGTTCTAAGCCGGTTAGCAGTAGCCCTGGCCCTGGAGGAAACTTTTTTCCGTGAAGGTTCCTGGTACGTA GAAGTACCCCGGGAAATAGAAAAAGCCTGTTACGAGGGAATTGAAAGTTACATAACCACCAGAGAAGACCTGATAGCCAT TTCTAATACTACTGCCTACCAGGCAATGGGTAAACTTTTTTTAGTAAAATTTGGTCCAGAAAAATATTCGCCGGTCTGGC CAGTAGACATTGCCGTCTGGCAAAAGGACGCAGCCGATAAAATATTAGGAAAGTTAATTTACGATGCCCGTCAGGGTTTT CCCATTCCCGACTACCCGCGGTCAGTACAGGAAGCTCATGAAAAAGCCAAAATTTCCAAAATTGAAATGATCGTTTTACA GGACGAAATTACAAGGCATTACGCCAGTGCATTTAATAAAGGTAACGGAGAAAAATTAGAGCGGTTTAAATACCTTGGTG AAAAGTTAAATACCTTCTTTAAGGGGGAATAA
Upstream 100 bases:
>100_bases CAGGTATAAACAAAAGAAGGATTTTGTCAAATTTTGTTCAATAATATATTTAGCAATATTTTCTTCTTCTACCATTAATG TTTAAGCAGGAGGTTCACCT
Downstream 100 bases:
>100_bases AATGCTTTTTGAACCAAACAAAGTAATCGGTATTTTCAAAGGTTTTACCGAAAAAGGTCTTGAATTTGCCGCAGAATTAG TTTTACCTTACAACGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MLYDLDITDFLKKLSYLQSYEKQLLERFCSYARQLKQNLKPIRPYTTSAISIVASDGGDNRIYFNPAVYEFVRVACSIWD KPYFDVFSSSAGVEQFIARTKPGEYEFGPLRRLCQDLGLEVTELSHLFTKFNNPRQFTLLMRAYREIIEWAVLYDLLNIE KPFPLKQVIFIRDGLLRSFVFKWEVFAKLDDLFRKKISKLKNLGIEASIVGIAKRSAVLSRLAVALALEETFFREGSWYV EVPREIEKACYEGIESYITTREDLIAISNTTAYQAMGKLFLVKFGPEKYSPVWPVDIAVWQKDAADKILGKLIYDARQGF PIPDYPRSVQEAHEKAKISKIEMIVLQDEITRHYASAFNKGNGEKLERFKYLGEKLNTFFKGE
Sequences:
>Translated_383_residues MLYDLDITDFLKKLSYLQSYEKQLLERFCSYARQLKQNLKPIRPYTTSAISIVASDGGDNRIYFNPAVYEFVRVACSIWD KPYFDVFSSSAGVEQFIARTKPGEYEFGPLRRLCQDLGLEVTELSHLFTKFNNPRQFTLLMRAYREIIEWAVLYDLLNIE KPFPLKQVIFIRDGLLRSFVFKWEVFAKLDDLFRKKISKLKNLGIEASIVGIAKRSAVLSRLAVALALEETFFREGSWYV EVPREIEKACYEGIESYITTREDLIAISNTTAYQAMGKLFLVKFGPEKYSPVWPVDIAVWQKDAADKILGKLIYDARQGF PIPDYPRSVQEAHEKAKISKIEMIVLQDEITRHYASAFNKGNGEKLERFKYLGEKLNTFFKGE >Mature_383_residues MLYDLDITDFLKKLSYLQSYEKQLLERFCSYARQLKQNLKPIRPYTTSAISIVASDGGDNRIYFNPAVYEFVRVACSIWD KPYFDVFSSSAGVEQFIARTKPGEYEFGPLRRLCQDLGLEVTELSHLFTKFNNPRQFTLLMRAYREIIEWAVLYDLLNIE KPFPLKQVIFIRDGLLRSFVFKWEVFAKLDDLFRKKISKLKNLGIEASIVGIAKRSAVLSRLAVALALEETFFREGSWYV EVPREIEKACYEGIESYITTREDLIAISNTTAYQAMGKLFLVKFGPEKYSPVWPVDIAVWQKDAADKILGKLIYDARQGF PIPDYPRSVQEAHEKAKISKIEMIVLQDEITRHYASAFNKGNGEKLERFKYLGEKLNTFFKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44414; Mature: 44414
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYDLDITDFLKKLSYLQSYEKQLLERFCSYARQLKQNLKPIRPYTTSAISIVASDGGDN CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCC RIYFNPAVYEFVRVACSIWDKPYFDVFSSSAGVEQFIARTKPGEYEFGPLRRLCQDLGLE EEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCC VTELSHLFTKFNNPRQFTLLMRAYREIIEWAVLYDLLNIEKPFPLKQVIFIRDGLLRSFV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FKWEVFAKLDDLFRKKISKLKNLGIEASIVGIAKRSAVLSRLAVALALEETFFREGSWYV HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE EVPREIEKACYEGIESYITTREDLIAISNTTAYQAMGKLFLVKFGPEKYSPVWPVDIAVW ECCHHHHHHHHHHHHHHHCCHHHHEEECCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHH QKDAADKILGKLIYDARQGFPIPDYPRSVQEAHEKAKISKIEMIVLQDEITRHYASAFNK CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCC GNGEKLERFKYLGEKLNTFFKGE CCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLYDLDITDFLKKLSYLQSYEKQLLERFCSYARQLKQNLKPIRPYTTSAISIVASDGGDN CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCC RIYFNPAVYEFVRVACSIWDKPYFDVFSSSAGVEQFIARTKPGEYEFGPLRRLCQDLGLE EEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCC VTELSHLFTKFNNPRQFTLLMRAYREIIEWAVLYDLLNIEKPFPLKQVIFIRDGLLRSFV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FKWEVFAKLDDLFRKKISKLKNLGIEASIVGIAKRSAVLSRLAVALALEETFFREGSWYV HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE EVPREIEKACYEGIESYITTREDLIAISNTTAYQAMGKLFLVKFGPEKYSPVWPVDIAVW ECCHHHHHHHHHHHHHHHCCHHHHEEECCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHH QKDAADKILGKLIYDARQGFPIPDYPRSVQEAHEKAKISKIEMIVLQDEITRHYASAFNK CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCC GNGEKLERFKYLGEKLNTFFKGE CCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA