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The map label for this gene is ccmH [C]

Identifier: 78044994

GI number: 78044994

Start: 485909

End: 486370

Strand: Direct

Name: ccmH [C]

Synonym: CHY_0563

Alternate gene names: 78044994

Gene position: 485909-486370 (Clockwise)

Preceding gene: 78043189

Following gene: 78044355

Centisome position: 20.23

GC content: 41.99

Gene sequence:

>462_bases
TTGCCTTTAAAAAAGATTTTCCTCTTCACAGCGGTAATTTTAGTGGTGGTTAGTAGTTTTCCAGCCCTGGGAGAAGTGGA
CCAAGACGTTTTAAACGATGTAATTCATACTTTTTGGGCTCCGGATTTTTGTGGTATGAACCTGGCCGATTGTCCGGCTT
CTTCCGCTGAAGAAATGCGGAATCAAATTAAAGAAATGTTGGAACAGGGAAAAACCAAACAGGAAATAATAAATTACTAC
ACAAACCTTTACGGTACCAAAATTTTAGCGGAACCTCCCAAAACGGGTGTATATGCGGCAATTTGGGTTATGCCGGCAAT
TGCGGTAGTTGCCGGCGGTGTATTAGTTTACACCGTGGTCAAGAAACGCCGGAAGGAAGTAAAGGTGGAGGAGAAGAAAG
AGCTAACGGTAGATGACGACCTTAGTTTGGAAGTGGAAAAGGAGTTGAAGAAATATTTATAA

Upstream 100 bases:

>100_bases
AAAGATCCGGTTAAAATCTACCTTGAAGGCAAGTGGATGTTTCAGCGCTTAGAGGTTGATGGTCTTGATCTTGCTTAATA
TTTCTTAGGGGGGTATTCTC

Downstream 100 bases:

>100_bases
GTGGCTAACACTTGGCATTTCTCCAGTGGCTTTAAAGATTGGCTCGCTGGAAATTCGCTGGTACGGAGTTTTGATGGCGA
TAAGTGTATTGATTGGTACT

Product: putative cytochrome c biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPLKKIFLFTAVILVVVSSFPALGEVDQDVLNDVIHTFWAPDFCGMNLADCPASSAEEMRNQIKEMLEQGKTKQEIINYY
TNLYGTKILAEPPKTGVYAAIWVMPAIAVVAGGVLVYTVVKKRRKEVKVEEKKELTVDDDLSLEVEKELKKYL

Sequences:

>Translated_153_residues
MPLKKIFLFTAVILVVVSSFPALGEVDQDVLNDVIHTFWAPDFCGMNLADCPASSAEEMRNQIKEMLEQGKTKQEIINYY
TNLYGTKILAEPPKTGVYAAIWVMPAIAVVAGGVLVYTVVKKRRKEVKVEEKKELTVDDDLSLEVEKELKKYL
>Mature_152_residues
PLKKIFLFTAVILVVVSSFPALGEVDQDVLNDVIHTFWAPDFCGMNLADCPASSAEEMRNQIKEMLEQGKTKQEIINYYT
NLYGTKILAEPPKTGVYAAIWVMPAIAVVAGGVLVYTVVKKRRKEVKVEEKKELTVDDDLSLEVEKELKKYL

Specific function: May Be Required For The Biogenesis Of C-Type Cytochromes. Possible Subunit Of A Heme Lyase. [C]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17211; Mature: 17080

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKKIFLFTAVILVVVSSFPALGEVDQDVLNDVIHTFWAPDFCGMNLADCPASSAEEMR
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
NQIKEMLEQGKTKQEIINYYTNLYGTKILAEPPKTGVYAAIWVMPAIAVVAGGVLVYTVV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KKRRKEVKVEEKKELTVDDDLSLEVEKELKKYL
HHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PLKKIFLFTAVILVVVSSFPALGEVDQDVLNDVIHTFWAPDFCGMNLADCPASSAEEMR
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
NQIKEMLEQGKTKQEIINYYTNLYGTKILAEPPKTGVYAAIWVMPAIAVVAGGVLVYTVV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KKRRKEVKVEEKKELTVDDDLSLEVEKELKKYL
HHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA