| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is lgt [H]
Identifier: 78044355
GI number: 78044355
Start: 486396
End: 487121
Strand: Direct
Name: lgt [H]
Synonym: CHY_0564
Alternate gene names: 78044355
Gene position: 486396-487121 (Clockwise)
Preceding gene: 78044994
Following gene: 78045059
Centisome position: 20.25
GC content: 45.32
Gene sequence:
>726_bases GTGGCTTTAAAGATTGGCTCGCTGGAAATTCGCTGGTACGGAGTTTTGATGGCGATAAGTGTATTGATTGGTACTTATCT TGCTTTAAAAGAAGCAAAACGGAAAAATATCCATGAGGACCATATTTACAACTTGGTTTTACTCGGAGCTCCAATAGGGT GGATTGGAGCCCGGATCTGGTACGTTCTCTGGAACTGGGATTATTACAGCAAGTATCCGGCCGAGATTCCGGCTATCTGG CATGGCGGGCTTGCCTTTCACGGTGGTATTTTAGCGGCAATCCTAGTGGGGATTGTTTACGCCCGGATGAAAAAGCAGTC TTTTTGGCAACTGGCGGATCTTTTTGCTCCCAGCATAATTTTAGGGCAGGCAATTGGCCGCTGGGGAAATTATTTTAACC AGGAAGCTTATGGCTACCCTACCGATCTTCCCTGGGCTATGTATATTGACGGTGCCTGGCGCCATCCCACCTTTTTATAC GAATCCCTCTGGGATCTGGGGGTGTTTGTTTACCTCTGGCAAACCCGTAAAAAACAAAGGTATAGTGGCGAAATCTTTTT AAAATATCTTCTCTGGTATTCGGTAGGAAGGTTTATTGTAGAAGGTTTTCGGGTGGATAGCTTTTGGGTTGGCCCCTTTC GTTTAGAACAGCTTTTAAGTGTGGGGTTAATCGTATTTAGCCTTATTATGATGAGGGTGTTGGGGAGAAATGAGGGAGAG AATTAG
Upstream 100 bases:
>100_bases GAGGAGAAGAAAGAGCTAACGGTAGATGACGACCTTAGTTTGGAAGTGGAAAAGGAGTTGAAGAAATATTTATAAGTGGC TAACACTTGGCATTTCTCCA
Downstream 100 bases:
>100_bases CAGTATTCTTTCGGTTATTACTGCGGTTTTAGGGTGCATTACCTGAGTGGGACCGGTAATATTAGCCTCCTTGGGTCTGG GAGGAGCGTCTTTTTCGTTT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MALKIGSLEIRWYGVLMAISVLIGTYLALKEAKRKNIHEDHIYNLVLLGAPIGWIGARIWYVLWNWDYYSKYPAEIPAIW HGGLAFHGGILAAILVGIVYARMKKQSFWQLADLFAPSIILGQAIGRWGNYFNQEAYGYPTDLPWAMYIDGAWRHPTFLY ESLWDLGVFVYLWQTRKKQRYSGEIFLKYLLWYSVGRFIVEGFRVDSFWVGPFRLEQLLSVGLIVFSLIMMRVLGRNEGE N
Sequences:
>Translated_241_residues MALKIGSLEIRWYGVLMAISVLIGTYLALKEAKRKNIHEDHIYNLVLLGAPIGWIGARIWYVLWNWDYYSKYPAEIPAIW HGGLAFHGGILAAILVGIVYARMKKQSFWQLADLFAPSIILGQAIGRWGNYFNQEAYGYPTDLPWAMYIDGAWRHPTFLY ESLWDLGVFVYLWQTRKKQRYSGEIFLKYLLWYSVGRFIVEGFRVDSFWVGPFRLEQLLSVGLIVFSLIMMRVLGRNEGE N >Mature_240_residues ALKIGSLEIRWYGVLMAISVLIGTYLALKEAKRKNIHEDHIYNLVLLGAPIGWIGARIWYVLWNWDYYSKYPAEIPAIWH GGLAFHGGILAAILVGIVYARMKKQSFWQLADLFAPSIILGQAIGRWGNYFNQEAYGYPTDLPWAMYIDGAWRHPTFLYE SLWDLGVFVYLWQTRKKQRYSGEIFLKYLLWYSVGRFIVEGFRVDSFWVGPFRLEQLLSVGLIVFSLIMMRVLGRNEGEN
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=263, Percent_Identity=31.1787072243346, Blast_Score=111, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 28031; Mature: 27900
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKIGSLEIRWYGVLMAISVLIGTYLALKEAKRKNIHEDHIYNLVLLGAPIGWIGARIW CEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHEECCCHHHHHHHHH YVLWNWDYYSKYPAEIPAIWHGGLAFHGGILAAILVGIVYARMKKQSFWQLADLFAPSII HHEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQAIGRWGNYFNQEAYGYPTDLPWAMYIDGAWRHPTFLYESLWDLGVFVYLWQTRKKQR HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YSGEIFLKYLLWYSVGRFIVEGFRVDSFWVGPFRLEQLLSVGLIVFSLIMMRVLGRNEGE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC N C >Mature Secondary Structure ALKIGSLEIRWYGVLMAISVLIGTYLALKEAKRKNIHEDHIYNLVLLGAPIGWIGARIW EEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHEECCCHHHHHHHHH YVLWNWDYYSKYPAEIPAIWHGGLAFHGGILAAILVGIVYARMKKQSFWQLADLFAPSII HHEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQAIGRWGNYFNQEAYGYPTDLPWAMYIDGAWRHPTFLYESLWDLGVFVYLWQTRKKQR HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YSGEIFLKYLLWYSVGRFIVEGFRVDSFWVGPFRLEQLLSVGLIVFSLIMMRVLGRNEGE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA