| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is accC1 [H]
Identifier: 78044884
GI number: 78044884
Start: 811050
End: 812603
Strand: Direct
Name: accC1 [H]
Synonym: CHY_0918
Alternate gene names: 78044884
Gene position: 811050-812603 (Clockwise)
Preceding gene: 78042975
Following gene: 78043991
Centisome position: 33.77
GC content: 47.94
Gene sequence:
>1554_bases GTGCAGGAAAAAATCTTAATAGCCAATCGGGGTGAAATTGCCCTAAGAATAATCCGGGCTTGCAAAGAACTGGGAATAAC TTCGGCGGTGGTTTATACCCCGGCAGATAAAGATAGCCTTCCGGTGAAAATGGCCGATGAAGCTTACCCCTTAAAAGAAA ATAAGAGTTACTTAAATATTGAGGAAATAATCAATACCGCATTAAAAAACCAGGTTACCGCAATTCATCCCGGTTACGGC TTTCTTGCGGAAAACTCTAAGTTCGCTAAAAGCTGCCTGGATGCCGGGATAAAATTTATCGGGCCTTCGGCCAAAGCTAT TGAACTTATGGGGGATAAAGCGGTAGCCAGGGAAATCATGAAAAAAGCCGGCGTTCCGGTAATTCCCGGGTCCGATGGCG AGATTGATGATTTCCGGGAAGCCCTGAAGGTTGCCGATGAAATTGGCTACCCGGTAATTGTCAAAGCTGCCGGCGGAGGC GGGGGCCGGGGGATGCGGATTGTTCACACTCCCAAGGAATTGGAAGAAGCGATTCAATCCGCGGCCCGGGAAGCCGCGTC AACCTTTGGTAATTCCAAATTATATTTAGAGAAGTATCTTCAGGACTGCCGGCACGTGGAGTTTCAAATTTTAGCCGACC AGTACGGGAACGCGGTTTATTTGGGAGAGCGGGACTGCTCCCTGCAGCGGCGCAACCAAAAGGTAATCGAAGAAGGACCG TGCCACGTCTTAACGGAAAGAATGCGGAAAAAAATGGGCGAACTGGCGGTGCGCTCCGCCATGGCCGTTCATTACGCCGG GGCCGGAACGGTGGAATTTTTGCTGGATGATCGGGGAAACTTTTATTTTATTGAAATGAATACCCGGATACAGGTGGAAC ATCCGGTAACCGAAATGATTACCGGCATAGATATCGTCAAGGAACAAATAAAAATCGGCCTCGGAGAAAGGTTAAGCATT ACCCAGAAAGATGTGAAAATTTACGGACACGCTATTGAGTGCCGGGTAAATGCGGAAGACCCGATATCGTTTATTCCTAC CCCGGGGGAAATAAAAAAATTAATGCTGCCCCAGGGGCCTTTTGTCCGGGTGGATACGGCAGTTTACGAAGGTTATACCA TACCGCCTTACTATGATTCGATGATTGCCAAGTTAATTGTCTGGGGAAGAAATCGGGAAGAAGCGATTATCAGGATGAAA CGAGCGCTGGAGGAGTTTGTAATTGGCGGTGTTACCACCAACTTACCTTTTTTACGCAAGGTGATGGATAATGCCTTTTA CCGCCGGGGTGAGGTTTATACCAACTTTATCAAACGCCGGATGGAACCTTTAACCGAAGAAGACCTGGAAACCTACCGGG ATAAACAGATATTTGGTGCCGAAGGGGAGCAAGAACAACCTTTAGAGGAAATAATTGCTGCGGTAGCTGCCGCCTTTGCG GCCGATCAGACTTCAAAGAAAGAAACGCGGGAGCAGCATTTAACGTTATCTCCCTGGAAAATCGGAGGCCTTTTGGAACA AATGCAGCGTCGGCTTTTTAGAGGAGGTGTATAA
Upstream 100 bases:
>100_bases TGATTAAAGCCCTTCTGGCTGTAAGTACCAAGAGAGAATCAAGACCCATGAAGAAGCACGGAAATATTCCCTTTTAACAA CCCCCGGGGAGGTGATAGGG
Downstream 100 bases:
>100_bases GATGGTAAAAAAATTTAAAATCCGGGTAAACGGCCGGGAATACGAGATAGAGGTGGAAGAAATCCACACCGAAGGTTGGG GAGTTTTACCAAATACCCGG
Product: acetyl-CoA carboxylase, biotin carboxylase
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MQEKILIANRGEIALRIIRACKELGITSAVVYTPADKDSLPVKMADEAYPLKENKSYLNIEEIINTALKNQVTAIHPGYG FLAENSKFAKSCLDAGIKFIGPSAKAIELMGDKAVAREIMKKAGVPVIPGSDGEIDDFREALKVADEIGYPVIVKAAGGG GGRGMRIVHTPKELEEAIQSAAREAASTFGNSKLYLEKYLQDCRHVEFQILADQYGNAVYLGERDCSLQRRNQKVIEEGP CHVLTERMRKKMGELAVRSAMAVHYAGAGTVEFLLDDRGNFYFIEMNTRIQVEHPVTEMITGIDIVKEQIKIGLGERLSI TQKDVKIYGHAIECRVNAEDPISFIPTPGEIKKLMLPQGPFVRVDTAVYEGYTIPPYYDSMIAKLIVWGRNREEAIIRMK RALEEFVIGGVTTNLPFLRKVMDNAFYRRGEVYTNFIKRRMEPLTEEDLETYRDKQIFGAEGEQEQPLEEIIAAVAAAFA ADQTSKKETREQHLTLSPWKIGGLLEQMQRRLFRGGV
Sequences:
>Translated_517_residues MQEKILIANRGEIALRIIRACKELGITSAVVYTPADKDSLPVKMADEAYPLKENKSYLNIEEIINTALKNQVTAIHPGYG FLAENSKFAKSCLDAGIKFIGPSAKAIELMGDKAVAREIMKKAGVPVIPGSDGEIDDFREALKVADEIGYPVIVKAAGGG GGRGMRIVHTPKELEEAIQSAAREAASTFGNSKLYLEKYLQDCRHVEFQILADQYGNAVYLGERDCSLQRRNQKVIEEGP CHVLTERMRKKMGELAVRSAMAVHYAGAGTVEFLLDDRGNFYFIEMNTRIQVEHPVTEMITGIDIVKEQIKIGLGERLSI TQKDVKIYGHAIECRVNAEDPISFIPTPGEIKKLMLPQGPFVRVDTAVYEGYTIPPYYDSMIAKLIVWGRNREEAIIRMK RALEEFVIGGVTTNLPFLRKVMDNAFYRRGEVYTNFIKRRMEPLTEEDLETYRDKQIFGAEGEQEQPLEEIIAAVAAAFA ADQTSKKETREQHLTLSPWKIGGLLEQMQRRLFRGGV >Mature_517_residues MQEKILIANRGEIALRIIRACKELGITSAVVYTPADKDSLPVKMADEAYPLKENKSYLNIEEIINTALKNQVTAIHPGYG FLAENSKFAKSCLDAGIKFIGPSAKAIELMGDKAVAREIMKKAGVPVIPGSDGEIDDFREALKVADEIGYPVIVKAAGGG GGRGMRIVHTPKELEEAIQSAAREAASTFGNSKLYLEKYLQDCRHVEFQILADQYGNAVYLGERDCSLQRRNQKVIEEGP CHVLTERMRKKMGELAVRSAMAVHYAGAGTVEFLLDDRGNFYFIEMNTRIQVEHPVTEMITGIDIVKEQIKIGLGERLSI TQKDVKIYGHAIECRVNAEDPISFIPTPGEIKKLMLPQGPFVRVDTAVYEGYTIPPYYDSMIAKLIVWGRNREEAIIRMK RALEEFVIGGVTTNLPFLRKVMDNAFYRRGEVYTNFIKRRMEPLTEEDLETYRDKQIFGAEGEQEQPLEEIIAAVAAAFA ADQTSKKETREQHLTLSPWKIGGLLEQMQRRLFRGGV
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=447, Percent_Identity=48.0984340044743, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI65506442, Length=441, Percent_Identity=49.4331065759637, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI295821183, Length=441, Percent_Identity=49.4331065759637, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI189095269, Length=441, Percent_Identity=49.4331065759637, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI106049528, Length=449, Percent_Identity=46.7706013363029, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI106049295, Length=449, Percent_Identity=46.7706013363029, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI106049292, Length=449, Percent_Identity=46.7706013363029, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI38679960, Length=522, Percent_Identity=31.8007662835249, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI38679977, Length=522, Percent_Identity=31.8007662835249, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI38679967, Length=522, Percent_Identity=31.8007662835249, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI38679974, Length=522, Percent_Identity=31.8007662835249, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI38679971, Length=522, Percent_Identity=31.8007662835249, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI134142062, Length=501, Percent_Identity=31.936127744511, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI18105007, Length=476, Percent_Identity=21.4285714285714, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1789654, Length=445, Percent_Identity=53.0337078651685, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1786216, Length=239, Percent_Identity=25.9414225941423, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987519, Length=489, Percent_Identity=46.4212678936605, Blast_Score=420, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17567343, Length=441, Percent_Identity=48.7528344671202, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17562816, Length=448, Percent_Identity=47.0982142857143, Blast_Score=377, Evalue=1e-105, Organism=Caenorhabditis elegans, GI71997163, Length=447, Percent_Identity=31.3199105145414, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI133931226, Length=545, Percent_Identity=28.9908256880734, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI71997168, Length=447, Percent_Identity=31.3199105145414, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI193204318, Length=192, Percent_Identity=23.9583333333333, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319685, Length=447, Percent_Identity=42.9530201342282, Blast_Score=369, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=45.1901565995526, Blast_Score=353, Evalue=5e-98, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=46.0850111856823, Blast_Score=345, Evalue=1e-95, Organism=Saccharomyces cerevisiae, GI6323863, Length=467, Percent_Identity=31.0492505353319, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6324343, Length=556, Percent_Identity=29.8561151079137, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6322569, Length=327, Percent_Identity=23.2415902140673, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24651757, Length=448, Percent_Identity=47.5446428571429, Blast_Score=412, Evalue=1e-115, Organism=Drosophila melanogaster, GI281363050, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652224, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652222, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652220, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652218, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652212, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652210, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652214, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI19921944, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652216, Length=442, Percent_Identity=48.4162895927602, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI24651759, Length=412, Percent_Identity=47.3300970873786, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI161076409, Length=494, Percent_Identity=31.5789473684211, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586458, Length=494, Percent_Identity=31.5789473684211, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI161076407, Length=494, Percent_Identity=31.5789473684211, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586460, Length=494, Percent_Identity=31.5789473684211, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI45555749, Length=429, Percent_Identity=21.9114219114219, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24642586, Length=429, Percent_Identity=21.9114219114219, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 57900; Mature: 57900
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKILIANRGEIALRIIRACKELGITSAVVYTPADKDSLPVKMADEAYPLKENKSYLNI CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCEECH EEIINTALKNQVTAIHPGYGFLAENSKFAKSCLDAGIKFIGPSAKAIELMGDKAVAREIM HHHHHHHHHCCCEEECCCCCEEECCCHHHHHHHHCCHHCCCCCCHHHHHHCCHHHHHHHH KKAGVPVIPGSDGEIDDFREALKVADEIGYPVIVKAAGGGGGRGMRIVHTPKELEEAIQS HHCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHH AAREAASTFGNSKLYLEKYLQDCRHVEFQILADQYGNAVYLGERDCSLQRRNQKVIEEGP HHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEHHCCCEEEECCCCCHHHHHHHHHHHCCC CHVLTERMRKKMGELAVRSAMAVHYAGAGTVEFLLDDRGNFYFIEMNTRIQVEHPVTEMI HHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCEEEEEECCEEEECCCHHHHH TGIDIVKEQIKIGLGERLSITQKDVKIYGHAIECRVNAEDPISFIPTPGEIKKLMLPQGP HHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEEEECCCCCCEECCCCHHHHHHHCCCCC FVRVDTAVYEGYTIPPYYDSMIAKLIVWGRNREEAIIRMKRALEEFVIGGVTTNLPFLRK EEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VMDNAFYRRGEVYTNFIKRRMEPLTEEDLETYRDKQIFGAEGEQEQPLEEIIAAVAAAFA HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHH ADQTSKKETREQHLTLSPWKIGGLLEQMQRRLFRGGV HCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQEKILIANRGEIALRIIRACKELGITSAVVYTPADKDSLPVKMADEAYPLKENKSYLNI CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCEECH EEIINTALKNQVTAIHPGYGFLAENSKFAKSCLDAGIKFIGPSAKAIELMGDKAVAREIM HHHHHHHHHCCCEEECCCCCEEECCCHHHHHHHHCCHHCCCCCCHHHHHHCCHHHHHHHH KKAGVPVIPGSDGEIDDFREALKVADEIGYPVIVKAAGGGGGRGMRIVHTPKELEEAIQS HHCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHH AAREAASTFGNSKLYLEKYLQDCRHVEFQILADQYGNAVYLGERDCSLQRRNQKVIEEGP HHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEHHCCCEEEECCCCCHHHHHHHHHHHCCC CHVLTERMRKKMGELAVRSAMAVHYAGAGTVEFLLDDRGNFYFIEMNTRIQVEHPVTEMI HHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCEEEEEECCEEEECCCHHHHH TGIDIVKEQIKIGLGERLSITQKDVKIYGHAIECRVNAEDPISFIPTPGEIKKLMLPQGP HHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEEEECCCCCCEECCCCHHHHHHHCCCCC FVRVDTAVYEGYTIPPYYDSMIAKLIVWGRNREEAIIRMKRALEEFVIGGVTTNLPFLRK EEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VMDNAFYRRGEVYTNFIKRRMEPLTEEDLETYRDKQIFGAEGEQEQPLEEIIAAVAAAFA HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHH ADQTSKKETREQHLTLSPWKIGGLLEQMQRRLFRGGV HCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8102363; 11759840 [H]