| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yusP [H]
Identifier: 78044871
GI number: 78044871
Start: 720756
End: 722357
Strand: Direct
Name: yusP [H]
Synonym: CHY_0814
Alternate gene names: 78044871
Gene position: 720756-722357 (Clockwise)
Preceding gene: 78044832
Following gene: 78042682
Centisome position: 30.01
GC content: 43.63
Gene sequence:
>1602_bases ATGGACCAGAATTCCAGAAGAAACATTTTACTAATTGGTTTAATCCTCGGGATGTTTTTTTCAGCACTGGACCAAACGGT GGTCGGCACTGCAATGCCGCGGATTATAGGAGAGCTCGGGGGGCTTGATATTTTATCCTGGGTTACTACTGCATACATGT TAAGTTCTACCACCTTTGTGCCTATAGCTGGAAAACTTGCCGATATCTACGGCCGGCGGATAATGTATGTATCTGGCCTT GGCCTTTTTATGCTGGGCTCCGCACTCTGTGGAACCAGTGAAAATATGACCCAGCTTATTATTTACCGCGGTCTTCAGGG CATTGGTGGAGGAATCTTGATGCCCATGGCTATGACGATTGTAGGCGACGTTTTTCCTCCGGATAAACGGGGCAAATGGC AGGGGGTAATGGGGGCTTTATTTGGATTGTCATCAATTGTAGGTCCCTCCCTTGGGGGCTGGATTGTTGACCATACCTCC TGGCGCTGGGTATTTTATATTAACTTACCTGTAGGCATTTTAGCAGCAATTACCGTATTTATTGGCTTAAGTGGGGAAAA ACGGCTTAAAGCAGAAGCTCCTATTGACTTTGCCGGGGCTTTAACCATGATTATTGCGGTGGCATCTCTTTTACTTGGCT TAAGTTTGGGAGGTAAAGAATATCCCTGGAATTCCTGGCAAATTATCGGTCTGTTTGCTACTTCCCTGGTATTTTTATTG ATTTTCTTTAGAGTGGAGAAGACTGCCAGGGAGCCGATTTTAAGCCTGGACCTTTTTAAAAACCGGATTTTTACCGTAGC CAACCTGGTAGGTTTTTTAATGGGTTTTGGCATGTTTGGGGCAATTATGTTTTTACCGTTATTCATGCAGGGGGTTCTGG GGATTTCCGCTACCAATTCGGGCAATACAATGATTCCCATGATGTTTGCTATGGTCTTTACCAGTATTTTGGGCGGACAA TTGGTTTCGAAAGTCGGTTTCAGGAATTTATTGATTACCGGAATGGCTTTAATGACATTAGGCTTTTATTTGCTAAGTAC TATGACCGTTGACACCACCCGGTTAGTGGTAACTTTGTACATTATAGTTCTGGGATTAGGAATGGGACTGGTGATGCCGA CCCTGACTATTGCCGTTCAGTACGCTTTCCCCTTAGAACAGCGGGGAGTTGCAACGTCGGCGACCCAGTTTTTTAGAAGT ATCGGCGGGACTTTTGGTGTAACCATTTTTGGGGTAGTTTTAAATCACCGCTCCATCGAACTTTTAAAGAAAGACTTTTT GCCGGTAGTGCAAAAAATCCCGGGGCTTGCAACGGGGCCCTTTGCTAATTTTTTGGAAAAAGCCAAAACCGATCCCCAGG GTTTGTTCAATACCTTACTTCGGCCGGAAGTACTGGAAAAAATACCACCTCAGCTCAAAGAAATTATCGTACCACCTTTA AAGCATGCTTTAGCTGAATCCATCCATTATGTATTTTGGGTGGCAATGTTTATAATTGTTTTTGGCATTTTTCTCAGCTT TTTCATGGAAAATATTAAGGTTGAAAAGCAACCAGGAGGAATTATCTCTAAAGAAAAACCGGTGGAAAGTGGAGCAAAAT AA
Upstream 100 bases:
>100_bases TTTTCTGGCTTGGTGGAATATTTAGGAGAAAAGGACACCAGCGAGTTAATCAGGCTTTTAAATAAAGCAAGCTATTACTT TAGAGAGGTGGCAAGATAAA
Downstream 100 bases:
>100_bases CTGGAAATGATTAAAAGCCTCCCGCAAAACCGGGGGGCTTATTAACATCTAATGGGGGAGGTTATACTGTTGGAAAAAGC GGTAAAATCGGCGAAACCAA
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MDQNSRRNILLIGLILGMFFSALDQTVVGTAMPRIIGELGGLDILSWVTTAYMLSSTTFVPIAGKLADIYGRRIMYVSGL GLFMLGSALCGTSENMTQLIIYRGLQGIGGGILMPMAMTIVGDVFPPDKRGKWQGVMGALFGLSSIVGPSLGGWIVDHTS WRWVFYINLPVGILAAITVFIGLSGEKRLKAEAPIDFAGALTMIIAVASLLLGLSLGGKEYPWNSWQIIGLFATSLVFLL IFFRVEKTAREPILSLDLFKNRIFTVANLVGFLMGFGMFGAIMFLPLFMQGVLGISATNSGNTMIPMMFAMVFTSILGGQ LVSKVGFRNLLITGMALMTLGFYLLSTMTVDTTRLVVTLYIIVLGLGMGLVMPTLTIAVQYAFPLEQRGVATSATQFFRS IGGTFGVTIFGVVLNHRSIELLKKDFLPVVQKIPGLATGPFANFLEKAKTDPQGLFNTLLRPEVLEKIPPQLKEIIVPPL KHALAESIHYVFWVAMFIIVFGIFLSFFMENIKVEKQPGGIISKEKPVESGAK
Sequences:
>Translated_533_residues MDQNSRRNILLIGLILGMFFSALDQTVVGTAMPRIIGELGGLDILSWVTTAYMLSSTTFVPIAGKLADIYGRRIMYVSGL GLFMLGSALCGTSENMTQLIIYRGLQGIGGGILMPMAMTIVGDVFPPDKRGKWQGVMGALFGLSSIVGPSLGGWIVDHTS WRWVFYINLPVGILAAITVFIGLSGEKRLKAEAPIDFAGALTMIIAVASLLLGLSLGGKEYPWNSWQIIGLFATSLVFLL IFFRVEKTAREPILSLDLFKNRIFTVANLVGFLMGFGMFGAIMFLPLFMQGVLGISATNSGNTMIPMMFAMVFTSILGGQ LVSKVGFRNLLITGMALMTLGFYLLSTMTVDTTRLVVTLYIIVLGLGMGLVMPTLTIAVQYAFPLEQRGVATSATQFFRS IGGTFGVTIFGVVLNHRSIELLKKDFLPVVQKIPGLATGPFANFLEKAKTDPQGLFNTLLRPEVLEKIPPQLKEIIVPPL KHALAESIHYVFWVAMFIIVFGIFLSFFMENIKVEKQPGGIISKEKPVESGAK >Mature_533_residues MDQNSRRNILLIGLILGMFFSALDQTVVGTAMPRIIGELGGLDILSWVTTAYMLSSTTFVPIAGKLADIYGRRIMYVSGL GLFMLGSALCGTSENMTQLIIYRGLQGIGGGILMPMAMTIVGDVFPPDKRGKWQGVMGALFGLSSIVGPSLGGWIVDHTS WRWVFYINLPVGILAAITVFIGLSGEKRLKAEAPIDFAGALTMIIAVASLLLGLSLGGKEYPWNSWQIIGLFATSLVFLL IFFRVEKTAREPILSLDLFKNRIFTVANLVGFLMGFGMFGAIMFLPLFMQGVLGISATNSGNTMIPMMFAMVFTSILGGQ LVSKVGFRNLLITGMALMTLGFYLLSTMTVDTTRLVVTLYIIVLGLGMGLVMPTLTIAVQYAFPLEQRGVATSATQFFRS IGGTFGVTIFGVVLNHRSIELLKKDFLPVVQKIPGLATGPFANFLEKAKTDPQGLFNTLLRPEVLEKIPPQLKEIIVPPL KHALAESIHYVFWVAMFIIVFGIFLSFFMENIKVEKQPGGIISKEKPVESGAK
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=413, Percent_Identity=29.2978208232446, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1788710, Length=433, Percent_Identity=28.4064665127021, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1790195, Length=343, Percent_Identity=30.0291545189504, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI87081983, Length=411, Percent_Identity=24.8175182481752, Blast_Score=126, Evalue=4e-30, Organism=Escherichia coli, GI1788392, Length=331, Percent_Identity=31.1178247734139, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI1790146, Length=193, Percent_Identity=27.4611398963731, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319770, Length=400, Percent_Identity=31.75, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6322958, Length=463, Percent_Identity=26.3498920086393, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323735, Length=304, Percent_Identity=30.2631578947368, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6319783, Length=376, Percent_Identity=26.063829787234, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324954, Length=417, Percent_Identity=26.8585131894484, Blast_Score=103, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6325455, Length=274, Percent_Identity=27.7372262773723, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321663, Length=152, Percent_Identity=29.6052631578947, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6323520, Length=364, Percent_Identity=25.2747252747253, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 58004; Mature: 58004
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQNSRRNILLIGLILGMFFSALDQTVVGTAMPRIIGELGGLDILSWVTTAYMLSSTTFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE PIAGKLADIYGRRIMYVSGLGLFMLGSALCGTSENMTQLIIYRGLQGIGGGILMPMAMTI ECHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH VGDVFPPDKRGKWQGVMGALFGLSSIVGPSLGGWIVDHTSWRWVFYINLPVGILAAITVF HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEECCHHHHHHHHHH IGLSGEKRLKAEAPIDFAGALTMIIAVASLLLGLSLGGKEYPWNSWQIIGLFATSLVFLL HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH IFFRVEKTAREPILSLDLFKNRIFTVANLVGFLMGFGMFGAIMFLPLFMQGVLGISATNS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC GNTMIPMMFAMVFTSILGGQLVSKVGFRNLLITGMALMTLGFYLLSTMTVDTTRLVVTLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIVLGLGMGLVMPTLTIAVQYAFPLEQRGVATSATQFFRSIGGTFGVTIFGVVLNHRSIE HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH LLKKDFLPVVQKIPGLATGPFANFLEKAKTDPQGLFNTLLRPEVLEKIPPQLKEIIVPPL HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCHHHHHHCCCHH KHALAESIHYVFWVAMFIIVFGIFLSFFMENIKVEKQPGGIISKEKPVESGAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDQNSRRNILLIGLILGMFFSALDQTVVGTAMPRIIGELGGLDILSWVTTAYMLSSTTFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE PIAGKLADIYGRRIMYVSGLGLFMLGSALCGTSENMTQLIIYRGLQGIGGGILMPMAMTI ECHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH VGDVFPPDKRGKWQGVMGALFGLSSIVGPSLGGWIVDHTSWRWVFYINLPVGILAAITVF HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEECCHHHHHHHHHH IGLSGEKRLKAEAPIDFAGALTMIIAVASLLLGLSLGGKEYPWNSWQIIGLFATSLVFLL HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH IFFRVEKTAREPILSLDLFKNRIFTVANLVGFLMGFGMFGAIMFLPLFMQGVLGISATNS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC GNTMIPMMFAMVFTSILGGQLVSKVGFRNLLITGMALMTLGFYLLSTMTVDTTRLVVTLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIVLGLGMGLVMPTLTIAVQYAFPLEQRGVATSATQFFRSIGGTFGVTIFGVVLNHRSIE HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH LLKKDFLPVVQKIPGLATGPFANFLEKAKTDPQGLFNTLLRPEVLEKIPPQLKEIIVPPL HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCHHHHHHCCCHH KHALAESIHYVFWVAMFIIVFGIFLSFFMENIKVEKQPGGIISKEKPVESGAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]