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The map label for this gene is 78044861

Identifier: 78044861

GI number: 78044861

Start: 268074

End: 268649

Strand: Direct

Name: 78044861

Synonym: CHY_0305

Alternate gene names: NA

Gene position: 268074-268649 (Clockwise)

Preceding gene: 78042967

Following gene: 78043344

Centisome position: 11.16

GC content: 43.92

Gene sequence:

>576_bases
TTGATCAGGAAAATTATGGCAGGTATTTTGGTGGTTTTTTTACTGGCTGGGGTTGCCGGTTGTAGCTGGTGGAATAAGAT
TTTTGAACGAAAGGCGGTAGTTCCGGACAAAACCGAGGTTAAAGAGGAAAGCGTAGAAGTAGGTCAAAAAGGCGAGATGA
TTGAAGTAGTTTTATATTTTGCCGATGAAACCGGCGAATATTTGGTTCCGGAAAAGCGGATGATTGCCAAAGTTCCTTCT
ATAGCCCGGGAAACATTAAACGAACTTTTTGCCGGGCCCCAATCTTCTAATTTAAAGCCGGTAGTTCCTCCTGGTACAGT
TTTACGGGATATCAATGTAAAACCCGATGGCTTGTGCATTGTGGACCTGAGCCGGGAAGTAATTGATAACCACCCGGGAG
GATCGGCGGCGGAAGCGTTAACCGTATATGCTATTGTGGACACATTATGCCAATTTCCTACGATAAAGAAAGTAGAGTTC
AGGGTTGAGGGGGAAAAAGTGGAAAGTTTAAAAGGTCACATGGACCTGACGGTCCCGGTGGAGAAAAATGAGGCAATGAT
TAAAATCCAAAATTAA

Upstream 100 bases:

>100_bases
TACCATTTTATCTACCTCCGGTAATAAACTTGTCCTTTATCGAATAGTTATTTATTAGTGTGGTACATCAGGGCAGGTTT
ATTTCGGGAGGTGAAAAAAT

Downstream 100 bases:

>100_bases
CCACAAACCTTTTTTGGCCTGCGGCCAAAAAAGGTTTTTTTCTTAAAAACCCTTGACTTTTTTTGTATTTAGAGTTTTTC
TAAAAGGGGCAATGGATGGA

Product: putative germination protein GerM

Products: NA

Alternate protein names: Germination Protein GerM; Spore Germination Protein-Like Protein; Spore Germination Protein; Lipoprotein LpqB GerMN Domain; Cell Wall Hydrolase/Autolysin; Germane Superfamily Protein; Spore Germination Protein-Like

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIRKIMAGILVVFLLAGVAGCSWWNKIFERKAVVPDKTEVKEESVEVGQKGEMIEVVLYFADETGEYLVPEKRMIAKVPS
IARETLNELFAGPQSSNLKPVVPPGTVLRDINVKPDGLCIVDLSREVIDNHPGGSAAEALTVYAIVDTLCQFPTIKKVEF
RVEGEKVESLKGHMDLTVPVEKNEAMIKIQN

Sequences:

>Translated_191_residues
MIRKIMAGILVVFLLAGVAGCSWWNKIFERKAVVPDKTEVKEESVEVGQKGEMIEVVLYFADETGEYLVPEKRMIAKVPS
IARETLNELFAGPQSSNLKPVVPPGTVLRDINVKPDGLCIVDLSREVIDNHPGGSAAEALTVYAIVDTLCQFPTIKKVEF
RVEGEKVESLKGHMDLTVPVEKNEAMIKIQN
>Mature_191_residues
MIRKIMAGILVVFLLAGVAGCSWWNKIFERKAVVPDKTEVKEESVEVGQKGEMIEVVLYFADETGEYLVPEKRMIAKVPS
IARETLNELFAGPQSSNLKPVVPPGTVLRDINVKPDGLCIVDLSREVIDNHPGGSAAEALTVYAIVDTLCQFPTIKKVEF
RVEGEKVESLKGHMDLTVPVEKNEAMIKIQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21092; Mature: 21092

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKIMAGILVVFLLAGVAGCSWWNKIFERKAVVPDKTEVKEESVEVGQKGEMIEVVLYF
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE
ADETGEYLVPEKRMIAKVPSIARETLNELFAGPQSSNLKPVVPPGTVLRDINVKPDGLCI
ECCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEE
VDLSREVIDNHPGGSAAEALTVYAIVDTLCQFPTIKKVEFRVEGEKVESLKGHMDLTVPV
EECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCEEEEEE
EKNEAMIKIQN
CCCCEEEEECC
>Mature Secondary Structure
MIRKIMAGILVVFLLAGVAGCSWWNKIFERKAVVPDKTEVKEESVEVGQKGEMIEVVLYF
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE
ADETGEYLVPEKRMIAKVPSIARETLNELFAGPQSSNLKPVVPPGTVLRDINVKPDGLCI
ECCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEE
VDLSREVIDNHPGGSAAEALTVYAIVDTLCQFPTIKKVEFRVEGEKVESLKGHMDLTVPV
EECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCEEEEEE
EKNEAMIKIQN
CCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA