| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044847
Identifier: 78044847
GI number: 78044847
Start: 507286
End: 508212
Strand: Direct
Name: 78044847
Synonym: CHY_0589
Alternate gene names: NA
Gene position: 507286-508212 (Clockwise)
Preceding gene: 78042654
Following gene: 78044149
Centisome position: 21.12
GC content: 45.95
Gene sequence:
>927_bases ATGGCCTTAAAAGAACTGGCGAAAAACTTCTGGCGGAAAAACTTTAATTTAAAACCCTTTGAAAAAGTAATAATTGTTTT TGATAATAAACGGGAAGAGCTGGCGCGGGCTCTTTCCGAAACTGCCGTCATGTTTAAAGCCGATTTGGGCCTGGTAAAAA TTTATGATTCGGAGCTTCCTCCGGATATCGAAGACCGTCTGGTCGGGGCGGACGTAGTTGTCTTTTTAACCGAAAAATCT TATTCTCACCATCCCTTAAGGGTAAAGGCTTGTGAGGCAGGAGCAAGAATTGCCAGTCTTCCCAAAATAACTTCGGAAAT CTTTAAAAGAGCTGCTCAGGCGGATTACGAAAAATTGGCGGCCAGAACGAAAACTTTGGCGGACCTTTTAACCGGTGCTT CTGAAGTCAAAATAACCTCTTCCCTTGGGACCAATTTTACGGTAAATATTCGGGGGAAAGAAGGCTTGCTGGATATCGGA AACTTTACCGAGCCCGGTAATTTTGGCAATTTTCCGGCGGGGGAAGCATCTTTGGCACCGGTCTTAGAGGGAACTTCAGG GGTTTTGGTGGTGGATGGCCGAAAAAAGCTTTTTGGACCTCACCCCTTGATTGTTCGGGTGGAAGACGGCCGGGTGGTGA GTGTTGAGGGGCCCGGGAGTACGGTGCTGGAGGAGTATTTTAATCAGTACGGAGAGAAAGCTCGCCTTATCGGTGAGTTT GGGATTGGCAGTAACGAGCAGGCACATATAGAAAGTATTCCCCTGGAAGCGGAAAAAGCAATGGGAACGGTCCACTTAGC CCTTGGCAATAATTTATCCTTTGGCGGCGAAAACGATGTTCGCTTTCACCTGGATTTAATCATTACTCAGCCTACGGTAG CGTTAGATGGGAATGTAATTATCAAGAAAGGTAAGCTTTTAATTTGA
Upstream 100 bases:
>100_bases GTGGGCGCTTTTATTGCCCTGTTGTCGGCTGCAGCTTCACTGGTAAGATCCCGGGGGCGAAAAGAAAAGCTTTTACAAAA ATAATTCTGGAGTGTTTACT
Downstream 100 bases:
>100_bases CCGTTTGGGGGCAAAAAACGACCGTTTACCCCAAAAAAGATGAATATTGACATTGAATCCCCTAAAATTTATACAGGGGG TTTTTTTATGCGGATGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Leucyl Aminopeptidase-Like Protein; Aminopeptidase T; Peptidase; Aminopeptidase-Like Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MALKELAKNFWRKNFNLKPFEKVIIVFDNKREELARALSETAVMFKADLGLVKIYDSELPPDIEDRLVGADVVVFLTEKS YSHHPLRVKACEAGARIASLPKITSEIFKRAAQADYEKLAARTKTLADLLTGASEVKITSSLGTNFTVNIRGKEGLLDIG NFTEPGNFGNFPAGEASLAPVLEGTSGVLVVDGRKKLFGPHPLIVRVEDGRVVSVEGPGSTVLEEYFNQYGEKARLIGEF GIGSNEQAHIESIPLEAEKAMGTVHLALGNNLSFGGENDVRFHLDLIITQPTVALDGNVIIKKGKLLI
Sequences:
>Translated_308_residues MALKELAKNFWRKNFNLKPFEKVIIVFDNKREELARALSETAVMFKADLGLVKIYDSELPPDIEDRLVGADVVVFLTEKS YSHHPLRVKACEAGARIASLPKITSEIFKRAAQADYEKLAARTKTLADLLTGASEVKITSSLGTNFTVNIRGKEGLLDIG NFTEPGNFGNFPAGEASLAPVLEGTSGVLVVDGRKKLFGPHPLIVRVEDGRVVSVEGPGSTVLEEYFNQYGEKARLIGEF GIGSNEQAHIESIPLEAEKAMGTVHLALGNNLSFGGENDVRFHLDLIITQPTVALDGNVIIKKGKLLI >Mature_307_residues ALKELAKNFWRKNFNLKPFEKVIIVFDNKREELARALSETAVMFKADLGLVKIYDSELPPDIEDRLVGADVVVFLTEKSY SHHPLRVKACEAGARIASLPKITSEIFKRAAQADYEKLAARTKTLADLLTGASEVKITSSLGTNFTVNIRGKEGLLDIGN FTEPGNFGNFPAGEASLAPVLEGTSGVLVVDGRKKLFGPHPLIVRVEDGRVVSVEGPGSTVLEEYFNQYGEKARLIGEFG IGSNEQAHIESIPLEAEKAMGTVHLALGNNLSFGGENDVRFHLDLIITQPTVALDGNVIIKKGKLLI
Specific function: Unknown
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33542; Mature: 33411
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKELAKNFWRKNFNLKPFEKVIIVFDNKREELARALSETAVMFKADLGLVKIYDSELP CCHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEECCCEEEEECCCCC PDIEDRLVGADVVVFLTEKSYSHHPLRVKACEAGARIASLPKITSEIFKRAAQADYEKLA CCHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHH ARTKTLADLLTGASEVKITSSLGTNFTVNIRGKEGLLDIGNFTEPGNFGNFPAGEASLAP HHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCC VLEGTSGVLVVDGRKKLFGPHPLIVRVEDGRVVSVEGPGSTVLEEYFNQYGEKARLIGEF EECCCCCEEEECCCHHHCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEC GIGSNEQAHIESIPLEAEKAMGTVHLALGNNLSFGGENDVRFHLDLIITQPTVALDGNVI CCCCCCCCEEEECCCCHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEECCCEE IKKGKLLI EECCCCCC >Mature Secondary Structure ALKELAKNFWRKNFNLKPFEKVIIVFDNKREELARALSETAVMFKADLGLVKIYDSELP CHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEECCCEEEEECCCCC PDIEDRLVGADVVVFLTEKSYSHHPLRVKACEAGARIASLPKITSEIFKRAAQADYEKLA CCHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHH ARTKTLADLLTGASEVKITSSLGTNFTVNIRGKEGLLDIGNFTEPGNFGNFPAGEASLAP HHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCC VLEGTSGVLVVDGRKKLFGPHPLIVRVEDGRVVSVEGPGSTVLEEYFNQYGEKARLIGEF EECCCCCEEEECCCHHHCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEC GIGSNEQAHIESIPLEAEKAMGTVHLALGNNLSFGGENDVRFHLDLIITQPTVALDGNVI CCCCCCCCEEEECCCCHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEECCCEE IKKGKLLI EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA