| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044845
Identifier: 78044845
GI number: 78044845
Start: 521473
End: 522096
Strand: Direct
Name: 78044845
Synonym: CHY_0603
Alternate gene names: NA
Gene position: 521473-522096 (Clockwise)
Preceding gene: 78042641
Following gene: 78043912
Centisome position: 21.71
GC content: 42.63
Gene sequence:
>624_bases GTGAAAAAAAAGCTCCGGCTTTTTATTCTGTTCATTTTTTTAATGGTTGTGGCAACTCCCGTAATGGCCAAATCCGATAG GAGTTACGGGAATAATTGCCTCAGCTGTCACACAAGGTTTGAATTTCCGGAAATTAAGCCCCAGACGGGGAGCACCATTA CCGAAGCCCAGTTTGTAAATTTGCTCTTAGAAAAGGTCTTGCAGCAAAAGGTGCAGGTGTTTGACCGGGAAGCAGCAGGA AATGTTAGCGATCTAAAGTATTTAGCCGATACCGGCCTCGTACCTGCTATGGAATTAAGTGTCAAAAATCCCAGTAAAGG CCTTACCAGGCTTGAAGCGGCTGGGTACTTGGCTCAGGTGCTAAAACCTTCCCTATCATCCAAAGAAACAGCGGCTATTT TAAGCCGCCTGGCCGACCGGAATAAAATCCCCTCTTCCTATCAAAAAGGGGTTGCCTATTTGCTGAAATATAAGCTACTA ACCCCTGAAGCAAAAGTTTATAAGGTGCGGAAAAAAGTTAAAGGAAAATGGGTTTATCAAAAAGAAACCAGGTATTATTT TAACCCTGGCAAAATTGTTACTAACGCCGAAGCGATTAACTGGCTGAACAAAATAAAGATTTAA
Upstream 100 bases:
>100_bases GCCAGCTTTTAAAGCAAAACGCTAAAAAGGTAAAGAGGCTTAAACCAGAATATAAAACGTCACCCAGAGTTTATTACATT ACCTTTTAGGGGGGAGAGCG
Downstream 100 bases:
>100_bases ATTGTTTGGGGGTGCAAAATTGAAGAAAAAATTGCTGTTAACTCTGGTAATAGCAGGTATTATTTTGCTATCGGCTCTTG GAATTGGGATTCACGAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKKKLRLFILFIFLMVVATPVMAKSDRSYGNNCLSCHTRFEFPEIKPQTGSTITEAQFVNLLLEKVLQQKVQVFDREAAG NVSDLKYLADTGLVPAMELSVKNPSKGLTRLEAAGYLAQVLKPSLSSKETAAILSRLADRNKIPSSYQKGVAYLLKYKLL TPEAKVYKVRKKVKGKWVYQKETRYYFNPGKIVTNAEAINWLNKIKI
Sequences:
>Translated_207_residues MKKKLRLFILFIFLMVVATPVMAKSDRSYGNNCLSCHTRFEFPEIKPQTGSTITEAQFVNLLLEKVLQQKVQVFDREAAG NVSDLKYLADTGLVPAMELSVKNPSKGLTRLEAAGYLAQVLKPSLSSKETAAILSRLADRNKIPSSYQKGVAYLLKYKLL TPEAKVYKVRKKVKGKWVYQKETRYYFNPGKIVTNAEAINWLNKIKI >Mature_207_residues MKKKLRLFILFIFLMVVATPVMAKSDRSYGNNCLSCHTRFEFPEIKPQTGSTITEAQFVNLLLEKVLQQKVQVFDREAAG NVSDLKYLADTGLVPAMELSVKNPSKGLTRLEAAGYLAQVLKPSLSSKETAAILSRLADRNKIPSSYQKGVAYLLKYKLL TPEAKVYKVRKKVKGKWVYQKETRYYFNPGKIVTNAEAINWLNKIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23454; Mature: 23454
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLRLFILFIFLMVVATPVMAKSDRSYGNNCLSCHTRFEFPEIKPQTGSTITEAQFVN CCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHH LLLEKVLQQKVQVFDREAAGNVSDLKYLADTGLVPAMELSVKNPSKGLTRLEAAGYLAQV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHH LKPSLSSKETAAILSRLADRNKIPSSYQKGVAYLLKYKLLTPEAKVYKVRKKVKGKWVYQ HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE KETRYYFNPGKIVTNAEAINWLNKIKI ECCEEEECCCCEEECHHHHHHHHHCCC >Mature Secondary Structure MKKKLRLFILFIFLMVVATPVMAKSDRSYGNNCLSCHTRFEFPEIKPQTGSTITEAQFVN CCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHH LLLEKVLQQKVQVFDREAAGNVSDLKYLADTGLVPAMELSVKNPSKGLTRLEAAGYLAQV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHH LKPSLSSKETAAILSRLADRNKIPSSYQKGVAYLLKYKLLTPEAKVYKVRKKVKGKWVYQ HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE KETRYYFNPGKIVTNAEAINWLNKIKI ECCEEEECCCCEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA