| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044797
Identifier: 78044797
GI number: 78044797
Start: 131415
End: 132068
Strand: Direct
Name: 78044797
Synonym: CHY_0159
Alternate gene names: NA
Gene position: 131415-132068 (Clockwise)
Preceding gene: 78042825
Following gene: 78043869
Centisome position: 5.47
GC content: 46.64
Gene sequence:
>654_bases GTGGCTGTTTTAAGCAAGGAGCAGTTAGCGGAGCTGGAAGTTTTGCTGGGACGCATTAAAGGGGTTAATGCGGCCCGGGT GGTATTGGATGAAGAGGGAAAGGTTGATGAAATCCATATATTAGCCGGCAGCAGTCGAAGTCCCAAGCAGATAGTACGGG ATGTAGAATCGGCCCTTTTAGCTTCCTTTAATATTGCTATTGACCATAAAAAAATCAGTATTGCCCAGGTGGAGGGCGGT GATACTGAAGACGATTCCCGGGAGGAAATCAGACCCCAGGTAGCCAAAGTCGATATGGCTTTGGAGCAAAGTATAGTGCG GGTCAATGTGGAATTAACCATCGGGGAGTCTAAGATTTCCGGGACGGCGGAAGGTCCCGCTACCTCCCAAAATAGAAAAA GGCTTTTGGCTATAGCTACCGTTTGTGCGGTGGAAAATTTCTTAAATAAAAACGGGATATTTGTGGTGGAGGATGTTCAG GAACTTTACATATCAGGGAAAAAAGCGATGGTGGTGGCAGTGGCTGCCATTTTAGGCCGGGAGGAGGAAAATTATTTAGG TGCGGCCTATGCCAACGGGGATGAGAGAGAAGCGGTAGTTAAAGCAACCTTAGCCGCTATCAATAGAAGACTTCGCTTTT TTGTAGAAAAATAA
Upstream 100 bases:
>100_bases TTTGAAGATAATTTGGATTTTTTAGATATTATGAGGCAACATGCAGGAAAATTGCGGATTATAGAGAATTATATCTAATA GTTATGAGAGGAGGGTATGC
Downstream 100 bases:
>100_bases AAGTTTAAATAAATTTTAGAGAGAGATAAAATTTTTTCTTTAATGCAGGTGTTTTGCTGGTGGAAGGACCGACATATCCA AAGACCGAAGCAAGCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAVLSKEQLAELEVLLGRIKGVNAARVVLDEEGKVDEIHILAGSSRSPKQIVRDVESALLASFNIAIDHKKISIAQVEGG DTEDDSREEIRPQVAKVDMALEQSIVRVNVELTIGESKISGTAEGPATSQNRKRLLAIATVCAVENFLNKNGIFVVEDVQ ELYISGKKAMVVAVAAILGREEENYLGAAYANGDEREAVVKATLAAINRRLRFFVEK
Sequences:
>Translated_217_residues MAVLSKEQLAELEVLLGRIKGVNAARVVLDEEGKVDEIHILAGSSRSPKQIVRDVESALLASFNIAIDHKKISIAQVEGG DTEDDSREEIRPQVAKVDMALEQSIVRVNVELTIGESKISGTAEGPATSQNRKRLLAIATVCAVENFLNKNGIFVVEDVQ ELYISGKKAMVVAVAAILGREEENYLGAAYANGDEREAVVKATLAAINRRLRFFVEK >Mature_216_residues AVLSKEQLAELEVLLGRIKGVNAARVVLDEEGKVDEIHILAGSSRSPKQIVRDVESALLASFNIAIDHKKISIAQVEGGD TEDDSREEIRPQVAKVDMALEQSIVRVNVELTIGESKISGTAEGPATSQNRKRLLAIATVCAVENFLNKNGIFVVEDVQE LYISGKKAMVVAVAAILGREEENYLGAAYANGDEREAVVKATLAAINRRLRFFVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23583; Mature: 23452
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLSKEQLAELEVLLGRIKGVNAARVVLDEEGKVDEIHILAGSSRSPKQIVRDVESALL CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH ASFNIAIDHKKISIAQVEGGDTEDDSREEIRPQVAKVDMALEQSIVRVNVELTIGESKIS HHHEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCC GTAEGPATSQNRKRLLAIATVCAVENFLNKNGIFVVEDVQELYISGKKAMVVAVAAILGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCC EEENYLGAAYANGDEREAVVKATLAAINRRLRFFVEK CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure AVLSKEQLAELEVLLGRIKGVNAARVVLDEEGKVDEIHILAGSSRSPKQIVRDVESALL CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH ASFNIAIDHKKISIAQVEGGDTEDDSREEIRPQVAKVDMALEQSIVRVNVELTIGESKIS HHHEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCC GTAEGPATSQNRKRLLAIATVCAVENFLNKNGIFVVEDVQELYISGKKAMVVAVAAILGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCC EEENYLGAAYANGDEREAVVKATLAAINRRLRFFVEK CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA