| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is ycbL [C]
Identifier: 78044793
GI number: 78044793
Start: 517219
End: 518037
Strand: Direct
Name: ycbL [C]
Synonym: CHY_0600
Alternate gene names: 78044793
Gene position: 517219-518037 (Clockwise)
Preceding gene: 78043603
Following gene: 78043983
Centisome position: 21.54
GC content: 39.32
Gene sequence:
>819_bases ATGTTAAAAACAAAGGTATTTCGGGAAGTTTTAGCAATTAAAATGGGAAGAACCATCTTTGGCAAATTATTGTATCCCGT TCATGCTTTTTATTTTGATGGGGTATTAATCGATACCGGTTGCTGGCACTGCCGCTTTGAATTTAGTTCTTTTCTCAAGG AATTAAATATTGATAAGGTTATTTTAACCCACGCCCATGAAGACCATTTTGGCAATGTTTGGGCTGCAGAAAAATGGCAA ATTCCAGTGTATGTGGAAGAAAAGGGCCTACCTTTTTTACAGGAACCGCGAAGATTAAAGATGGAGCTCTACCGGAAGAT AACTTGGGGGGAACCGGCAAAAGCCAAAGCCCTACCTTTACCCCAATTGGTAGAAACGCAGCATTTTACCCTGGAAGTAA TAAAAACCCCCGGGCACAGTCCGGACCATGTCTGTTTTTATGAACCGGAAAACGGTTACTTATTTTCCGGAGACCTGTAC TTAGGGGAACGCCAGAACTTGTTAATGTATACTGAAAATTTTTGGGAAATTAGAAATTCTTTAAAAAAGGTGTTAGCTTT AAACCCTAAAATCCTTTTTTGCGGTTTAAACGGGTATGTCCCCGGGGCTTCAGAAAAATTAAGAGCAAAACTTAACTACT GGGATGATTTAGCCGGTAAGGTCTTAGATTTGGCAGACAGGGGATTTAGTTTGAAGGAAATCAACCAACTAATGTTTAAA AAGAAACATTTTATTTCCATAGTTTCCGGCGGTTCTTTTTCTTCATTAAACCTTGTCCGGTCAATAATTAGAGACCGGAA GGACGGGGAAGAAATTTAA
Upstream 100 bases:
>100_bases TCTCATGGCGGTAGCGAGAGCCCGGGAGAGGTCGCGGTGGTTCCCCTCAGAACCCCCGGGCTTTAGCCCTGGGGAGGCTC AGAAAAGAGGTAATATCGCG
Downstream 100 bases:
>100_bases CAAAAATTTACCTGGACCCGTTACTGGGTCCTTTTAATTTTTATTACCCGTGTAAGAAATTTGTAAGAAATGAAAGTTAT TATTATAACAAACATAGTTA
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain-Containing Protein; Zn-Dependent Hydrolase
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLKTKVFREVLAIKMGRTIFGKLLYPVHAFYFDGVLIDTGCWHCRFEFSSFLKELNIDKVILTHAHEDHFGNVWAAEKWQ IPVYVEEKGLPFLQEPRRLKMELYRKITWGEPAKAKALPLPQLVETQHFTLEVIKTPGHSPDHVCFYEPENGYLFSGDLY LGERQNLLMYTENFWEIRNSLKKVLALNPKILFCGLNGYVPGASEKLRAKLNYWDDLAGKVLDLADRGFSLKEINQLMFK KKHFISIVSGGSFSSLNLVRSIIRDRKDGEEI
Sequences:
>Translated_272_residues MLKTKVFREVLAIKMGRTIFGKLLYPVHAFYFDGVLIDTGCWHCRFEFSSFLKELNIDKVILTHAHEDHFGNVWAAEKWQ IPVYVEEKGLPFLQEPRRLKMELYRKITWGEPAKAKALPLPQLVETQHFTLEVIKTPGHSPDHVCFYEPENGYLFSGDLY LGERQNLLMYTENFWEIRNSLKKVLALNPKILFCGLNGYVPGASEKLRAKLNYWDDLAGKVLDLADRGFSLKEINQLMFK KKHFISIVSGGSFSSLNLVRSIIRDRKDGEEI >Mature_272_residues MLKTKVFREVLAIKMGRTIFGKLLYPVHAFYFDGVLIDTGCWHCRFEFSSFLKELNIDKVILTHAHEDHFGNVWAAEKWQ IPVYVEEKGLPFLQEPRRLKMELYRKITWGEPAKAKALPLPQLVETQHFTLEVIKTPGHSPDHVCFYEPENGYLFSGDLY LGERQNLLMYTENFWEIRNSLKKVLALNPKILFCGLNGYVPGASEKLRAKLNYWDDLAGKVLDLADRGFSLKEINQLMFK KKHFISIVSGGSFSSLNLVRSIIRDRKDGEEI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31515; Mature: 31515
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTKVFREVLAIKMGRTIFGKLLYPVHAFYFDGVLIDTGCWHCRFEFSSFLKELNIDKV CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHCCCCEE ILTHAHEDHFGNVWAAEKWQIPVYVEEKGLPFLQEPRRLKMELYRKITWGEPAKAKALPL EEEECCCCCCCCEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PQLVETQHFTLEVIKTPGHSPDHVCFYEPENGYLFSGDLYLGERQNLLMYTENFWEIRNS HHHHCCCCEEEEEEECCCCCCCEEEEEECCCCEEEECEEEECCCCCEEEEHHHHHHHHHH LKKVLALNPKILFCGLNGYVPGASEKLRAKLNYWDDLAGKVLDLADRGFSLKEINQLMFK HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHH KKHFISIVSGGSFSSLNLVRSIIRDRKDGEEI HHHEEEEECCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKTKVFREVLAIKMGRTIFGKLLYPVHAFYFDGVLIDTGCWHCRFEFSSFLKELNIDKV CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHCCCCEE ILTHAHEDHFGNVWAAEKWQIPVYVEEKGLPFLQEPRRLKMELYRKITWGEPAKAKALPL EEEECCCCCCCCEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PQLVETQHFTLEVIKTPGHSPDHVCFYEPENGYLFSGDLYLGERQNLLMYTENFWEIRNS HHHHCCCCEEEEEEECCCCCCCEEEEEECCCCEEEECEEEECCCCCEEEEHHHHHHHHHH LKKVLALNPKILFCGLNGYVPGASEKLRAKLNYWDDLAGKVLDLADRGFSLKEINQLMFK HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHH KKHFISIVSGGSFSSLNLVRSIIRDRKDGEEI HHHEEEEECCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA