| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yjjI [H]
Identifier: 78044689
GI number: 78044689
Start: 775237
End: 776772
Strand: Direct
Name: yjjI [H]
Synonym: CHY_0876
Alternate gene names: 78044689
Gene position: 775237-776772 (Clockwise)
Preceding gene: 78043792
Following gene: 78044002
Centisome position: 32.28
GC content: 42.77
Gene sequence:
>1536_bases ATGAAGTTAGAAACTTTAAGTCGGGTGATAAGAGCGATGAACCGGGTTTATGAAATAATTACCGATACTTCTTTGGATTA CAAAGATAAGCGGCACTTACTGGCGGCGGAGGCGGAAAACTCCCTTCCTTATGTAAAAATTAGTGAAAAGGCTCAGCAGT ACTTTTCCCAGGGAATCTTATGTGATCTTTTTGAAGGTCACGCTCCCTACCGGCCGCGTTATATTTTGCCGGATTACCAA AAATTTATGGAAAAGGGAAGCGAGTACTTAAATTTAAAACCCCCGCAGGATTTATTTGAAGCGGTTAATGCCCTTTTAAT TATCTATCGCTACGTTCCTTCCATAACGAGCTATCCCGTATATCTGGGACAGGTAGATGAGCATTTAGAACCGTTTGTTT TGGCTGCCGGCGAGGAACTTTCCGAAAAACTCTTAAAAATGTTTTTGGTGCAAATAGACCGGGTGTTACCCGATGGGTTT GTCCACATGAACATTGGGCCCAAAGATACCCGTACCGGACGATTAATTTTGAAGCTGGAGCGGGAGCTTAAGCAGGCAGT ACCCAACATTTCCTTAAAATATAATGAAGAAACTCCTGATAGTTTTGCCATAGAGGCGGTTAAAACGGCATTGGAAATTG GAAAACCGTATTTTGTCAACGACCGGGAATTAAAAGAAGACCTTGACCCTGCTTACGGAGTTGCCAGCTGCTATAATACT TTATTAATTGGTGGAGGCAGCTTTACTTTAGTTCGGTTAAATTTAAAAGAAGCTGCCAAAAAAGCGAGGGATTTTCAGGA CTTTATCCGGAATGTTTTACCTGATGCAGTGTTGGCGCAGGCCGAGGTTATCAATGCCCGGGCTAAATTTATCGTAGAAG AAGCGAAATTTTTTGAAACTTCCTTTTTAGCTAAAGAAGGTTTAATTTCCCTTGCCCGCTTTACCTCCATGGCCGGATAT TTTGGACTGTACGAATGTATTGAACACTTAACGGGACTGAAGCTTGGTAAGGATAAAGAAGCCCTTTACTATGCCGAACA AGTGTTAAAAACCGCCAAAGATACTTTAGAAAGTGTCCCGGGAGCTTACTGCTACGGTACCGGCGGCAGGATAGGTTTTC ATGCCCAGTCGGGGATTGACAGCGACATCGATGTAACGCCCGGGGTGCGGATAAAATACGGCGAGGAGCCGGACATTTTT ACCCAGATTAAAACCGAGGGAAGGCTCCATAAATACTTTGATACAGGCATTAGTGATATTTACATCTTTGACCGGACCGC CCGGGAAAATCCGGAAGGGGTTTTAAAAATAATCAAGGGGGCTTTAAAAGAGGGAATCAGAGTATTTTCTTTCAACACTT CCGATTCGGAATTTATCCGGATTACCGGTTACCTTGTAAAAAGAACCGATGTTTTAAAATACGAAAAAGGCGAGGTTTTA CGGGAAGATACGGTAAAGCTTGGAGCAGCAAGCATTAAAAACAACAATACCGAAGCCAGAAAGGTAAGGATAATCGGTGA GAGGAATAGTCAATAA
Upstream 100 bases:
>100_bases GATAAAATCCAGGCATTGAAAAAGGTAAGGGAGGAAGTAGAGAAATTTTACCTTAAAAGTAAATAAAGATTTTGCTACAA GCGGTAAAAAGGGTGGTATA
Downstream 100 bases:
>100_bases AATTATTGAGGTAAGCTTTATCGACGGTCCCGGAACCCGGATGGCAATCTTTCTCCAGGGTTGTAATCTTGACTGCCTGT ACTGTCACAACCCGGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLFEGHAPYRPRYILPDYQ KFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGF VHMNIGPKDTRTGRLILKLERELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFETSFLAKEGLISLARFTSMAGY FGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVPGAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIF TQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL REDTVKLGAASIKNNNTEARKVRIIGERNSQ
Sequences:
>Translated_511_residues MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLFEGHAPYRPRYILPDYQ KFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGF VHMNIGPKDTRTGRLILKLERELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFETSFLAKEGLISLARFTSMAGY FGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVPGAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIF TQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL REDTVKLGAASIKNNNTEARKVRIIGERNSQ >Mature_511_residues MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLFEGHAPYRPRYILPDYQ KFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGF VHMNIGPKDTRTGRLILKLERELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFETSFLAKEGLISLARFTSMAGY FGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVPGAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIF TQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL REDTVKLGAASIKNNNTEARKVRIIGERNSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0521 [H]
Homologues:
Organism=Escherichia coli, GI1790840, Length=504, Percent_Identity=40.6746031746032, Blast_Score=403, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016905 [H]
Pfam domain/function: PF11230 DUF3029 [H]
EC number: NA
Molecular weight: Translated: 57845; Mature: 57845
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGIL CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCEEEEHHHHHHHHHCCCE CDLFEGHAPYRPRYILPDYQKFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPV EEHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE YLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGFVHMNIGPKDTRTGRLILKLE EECCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH RELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCHHHHHHHHHHH LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFET HEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFLAKEGLISLARFTSMAGYFGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIFTQIKTEGRLHKYFDTGISDI CCEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHCCCCEE YIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEHHHHHEECCCCHH REDTVKLGAASIKNNNTEARKVRIIGERNSQ HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGIL CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCEEEEHHHHHHHHHCCCE CDLFEGHAPYRPRYILPDYQKFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPV EEHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE YLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGFVHMNIGPKDTRTGRLILKLE EECCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH RELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCHHHHHHHHHHH LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFET HEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFLAKEGLISLARFTSMAGYFGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIFTQIKTEGRLHKYFDTGISDI CCEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHCCCCEE YIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEHHHHHEECCCCHH REDTVKLGAASIKNNNTEARKVRIIGERNSQ HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 3019678 [H]