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The map label for this gene is yjjW [H]

Identifier: 78044002

GI number: 78044002

Start: 776753

End: 777598

Strand: Direct

Name: yjjW [H]

Synonym: CHY_0877

Alternate gene names: 78044002

Gene position: 776753-777598 (Clockwise)

Preceding gene: 78044689

Following gene: 78043876

Centisome position: 32.34

GC content: 42.79

Gene sequence:

>846_bases
GTGAGAGGAATAGTCAATAAAATTATTGAGGTAAGCTTTATCGACGGTCCCGGAACCCGGATGGCAATCTTTCTCCAGGG
TTGTAATCTTGACTGCCTGTACTGTCACAACCCGGAAACCCAAAAATACTGCCAGAATTGTGGTAGATGTGTTGAACAGT
GCCCGGCCGGAGCCTTAACAAACCTTGACGGTAAGGTAACCTGGGATAAGGCGATTTGCCAGGGGTGTGACCGTTGCCTT
GAGGTGTGTCCCCATTCATCCACTCCCAAAACTACCCTTTGGGAGGCGGAGGATTTAGTAGCTTATATTTTGGAAAATGA
AGTTTTTTTAGATGGGGTAACCTTTTCCGGCGGGGAATGCACCCTGCAGGCGGATTTTATCCTGGAAGTTAGCAAAAAGC
TTAAAGAAAAAAGTAATCTAACGGTTTTTGTCGATACTAATTGCTTTCTGGAGGAAGAGAAATTTCTAACCTTATGTCAA
AATATCGATGGAATTATGGCCGATTTAAAAGCTTTTGACCCGGTTTTGCACCGAAAGCTGACCGGTGTGGCCAACGAATT
AATTTTTCAAAATTTAAATACGGCGTCGCAGCTTGGAGTACTGTATGAGATTCGAACGGTATTGGTGCCCGGCTTAAACG
ATCATCCGCAGGAAGTAAAAAACATTGCCCGGTTTATTCGTGAACTCAATTCGTATACATTGTTAAAACTGATACCTTTC
CGTAACTATGGTGTAAAATCTTATTTAAAAGGCGTACCGAACTTGCCTGAAGAAAAATTTTTTGAGCTATTTGAGTTTGC
AACGGAAATTCTTGGTTCCCGGGTTTACGGGAAGTACGGTATGTAA

Upstream 100 bases:

>100_bases
AAATACGAAAAAGGCGAGGTTTTACGGGAAGATACGGTAAAGCTTGGAGCAGCAAGCATTAAAAACAACAATACCGAAGC
CAGAAAGGTAAGGATAATCG

Downstream 100 bases:

>100_bases
AGTTTGTATTTAAATTCTTTTGCCAAAAGTATTGTAATTTTAACTTTATGTTTTATAATAGAGTAAAAAAGATAAGATTT
TACCGATAAAGGCAAACCCG

Product: putative pyruvate formate-lyase activating enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRGIVNKIIEVSFIDGPGTRMAIFLQGCNLDCLYCHNPETQKYCQNCGRCVEQCPAGALTNLDGKVTWDKAICQGCDRCL
EVCPHSSTPKTTLWEAEDLVAYILENEVFLDGVTFSGGECTLQADFILEVSKKLKEKSNLTVFVDTNCFLEEEKFLTLCQ
NIDGIMADLKAFDPVLHRKLTGVANELIFQNLNTASQLGVLYEIRTVLVPGLNDHPQEVKNIARFIRELNSYTLLKLIPF
RNYGVKSYLKGVPNLPEEKFFELFEFATEILGSRVYGKYGM

Sequences:

>Translated_281_residues
MRGIVNKIIEVSFIDGPGTRMAIFLQGCNLDCLYCHNPETQKYCQNCGRCVEQCPAGALTNLDGKVTWDKAICQGCDRCL
EVCPHSSTPKTTLWEAEDLVAYILENEVFLDGVTFSGGECTLQADFILEVSKKLKEKSNLTVFVDTNCFLEEEKFLTLCQ
NIDGIMADLKAFDPVLHRKLTGVANELIFQNLNTASQLGVLYEIRTVLVPGLNDHPQEVKNIARFIRELNSYTLLKLIPF
RNYGVKSYLKGVPNLPEEKFFELFEFATEILGSRVYGKYGM
>Mature_281_residues
MRGIVNKIIEVSFIDGPGTRMAIFLQGCNLDCLYCHNPETQKYCQNCGRCVEQCPAGALTNLDGKVTWDKAICQGCDRCL
EVCPHSSTPKTTLWEAEDLVAYILENEVFLDGVTFSGGECTLQADFILEVSKKLKEKSNLTVFVDTNCFLEEEKFLTLCQ
NIDGIMADLKAFDPVLHRKLTGVANELIFQNLNTASQLGVLYEIRTVLVPGLNDHPQEVKNIARFIRELNSYTLLKLIPF
RNYGVKSYLKGVPNLPEEKFFELFEFATEILGSRVYGKYGM

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1790839, Length=261, Percent_Identity=38.6973180076628, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1787130, Length=242, Percent_Identity=26.8595041322314, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790389, Length=258, Percent_Identity=23.6434108527132, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI226510931, Length=286, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011352
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 31651; Mature: 31651

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01087 RADICAL_ACTIVATING ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIVNKIIEVSFIDGPGTRMAIFLQGCNLDCLYCHNPETQKYCQNCGRCVEQCPAGALT
CCCHHHHHHEEEEECCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
NLDGKVTWDKAICQGCDRCLEVCPHSSTPKTTLWEAEDLVAYILENEVFLDGVTFSGGEC
CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECEEECCCEE
TLQADFILEVSKKLKEKSNLTVFVDTNCFLEEEKFLTLCQNIDGIMADLKAFDPVLHRKL
EEEHHHHHHHHHHHHHHCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVANELIFQNLNTASQLGVLYEIRTVLVPGLNDHPQEVKNIARFIRELNSYTLLKLIPF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
RNYGVKSYLKGVPNLPEEKFFELFEFATEILGSRVYGKYGM
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRGIVNKIIEVSFIDGPGTRMAIFLQGCNLDCLYCHNPETQKYCQNCGRCVEQCPAGALT
CCCHHHHHHEEEEECCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
NLDGKVTWDKAICQGCDRCLEVCPHSSTPKTTLWEAEDLVAYILENEVFLDGVTFSGGEC
CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECEEECCCEE
TLQADFILEVSKKLKEKSNLTVFVDTNCFLEEEKFLTLCQNIDGIMADLKAFDPVLHRKL
EEEHHHHHHHHHHHHHHCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVANELIFQNLNTASQLGVLYEIRTVLVPGLNDHPQEVKNIARFIRELNSYTLLKLIPF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
RNYGVKSYLKGVPNLPEEKFFELFEFATEILGSRVYGKYGM
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]