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The map label for this gene is 78044660

Identifier: 78044660

GI number: 78044660

Start: 114056

End: 115297

Strand: Direct

Name: 78044660

Synonym: CHY_0131

Alternate gene names: NA

Gene position: 114056-115297 (Clockwise)

Preceding gene: 78044086

Following gene: 78042880

Centisome position: 4.75

GC content: 47.58

Gene sequence:

>1242_bases
ATGAGAATAGTAGTTGCCCGGGAAAATGGCGAGTTTTTTGATTATCCCCTGCAGCCTGCCGGGCGCACGGGGAATTTCTT
TACCCCCATTGAAAAGTCGGAATTAATTAAGCTTCCCCGGGGGGCAACGTTAGTTTTAATACCGGGAAGTAAAGCCCTGG
GATTTGACAAAAAGGGGGAACTCCGAAAAACCGAATACTTAGCGGTGGCTGCTCTCCTGCCCCAGGGGTATACCCGGCTA
TTTCTTCCGGCCTATATTAAAGAAAACGCTGAACGGTTGCCCCTTTTTGGTTATACCGCGGTGGTGGCGTATCGTGGAGA
GCTTTATGCGGCAGCGGCAAAAACCGATGACGAATTCCGCTGGGCACCGGAAAATTATGATTTACCTGAGTTAAACGCTA
AAATAAAAGAGGCAAAAGCCCTTTTTCCCGAAAACCGGTTAGTACGTCATCTGGAAAACTGTGCTGTAAATTACCGCTGC
TTTACCGCCCAGAACCTTTTTTACCGCCGCTGGGAAGGCGGGATTCCGGTATCGCCCGCCTGTAATGCCCGCTGCCTGGG
GTGTATTAGCCTGCAGCCAGCCGATTGCTGCCCCTCTCCTCAGGAGCGAATTAAATTTGTACCTTCAATAGATGAAGTAG
CTTCCCTGATGACCTATCACCTCACGGGAGCCGGAAGGGAAGGCATTGTAAGTTTTGGGCAGGGATGTGAAGGGGAACCG
TCGTTGCAGGCTGGCCTGATAGCCAGAGCAATTATGGAGACAAGGCGAGAAGTTAAAAGCGGAACCATTAATATCAATAC
TAACGGCGGGAATTTTCCGGGTTTAAAGGAAATTATCGATGCCGGCGTTGATAGCCTGCGGGTAAGTATCATTAGTGCCC
GGGAAGAAATTTATGAAAGCTATTACCAGCCGGTAAACTATAACCTGGAGCAGGTGAAAAGAACCATCAAATATGCTAAA
GAAAAAGACAAGTTTGTAGCGTTGAACTACCTGGTGTTTCCGGGACTTTCTGATACTGAAGAAGAGTATGATGCTCTGAA
ATATCTACTCCGGGAGTGCCGACCGGATATGGTACAGTTTAGAAATTTAAACATCGACCCGGATTATTTGGGAACTGGTA
TAGTTTTTCCTTCTAAACCTTTTGGACTGCAAAACCTGATTTTGCGGCTTAAAGCTGATTTTCCCGGGCTTATCCTGGGG
AATTACTCCCGTCCCGTAAATAGGGAAGAAAACACTACCTAA

Upstream 100 bases:

>100_bases
ACCTTACTTCCCAGGATGCAGCGGAATACTTAATTAATCTTATTAAAAAGACCAAGAGCAATGAAGAACTAATCGAACGC
TATTTAAGGAAGAGTAGGTC

Downstream 100 bases:

>100_bases
AAAAGTTTTGCCCCATTGCCAAAAATTTTACGGAATGGGGCTTTTTAATTTTACAACAAATGTCTTAATATTACCAGCGA
GGTGATACCAAGGACAATAC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical SAM Domain Family Protein

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MRIVVARENGEFFDYPLQPAGRTGNFFTPIEKSELIKLPRGATLVLIPGSKALGFDKKGELRKTEYLAVAALLPQGYTRL
FLPAYIKENAERLPLFGYTAVVAYRGELYAAAAKTDDEFRWAPENYDLPELNAKIKEAKALFPENRLVRHLENCAVNYRC
FTAQNLFYRRWEGGIPVSPACNARCLGCISLQPADCCPSPQERIKFVPSIDEVASLMTYHLTGAGREGIVSFGQGCEGEP
SLQAGLIARAIMETRREVKSGTININTNGGNFPGLKEIIDAGVDSLRVSIISAREEIYESYYQPVNYNLEQVKRTIKYAK
EKDKFVALNYLVFPGLSDTEEEYDALKYLLRECRPDMVQFRNLNIDPDYLGTGIVFPSKPFGLQNLILRLKADFPGLILG
NYSRPVNREENTT

Sequences:

>Translated_413_residues
MRIVVARENGEFFDYPLQPAGRTGNFFTPIEKSELIKLPRGATLVLIPGSKALGFDKKGELRKTEYLAVAALLPQGYTRL
FLPAYIKENAERLPLFGYTAVVAYRGELYAAAAKTDDEFRWAPENYDLPELNAKIKEAKALFPENRLVRHLENCAVNYRC
FTAQNLFYRRWEGGIPVSPACNARCLGCISLQPADCCPSPQERIKFVPSIDEVASLMTYHLTGAGREGIVSFGQGCEGEP
SLQAGLIARAIMETRREVKSGTININTNGGNFPGLKEIIDAGVDSLRVSIISAREEIYESYYQPVNYNLEQVKRTIKYAK
EKDKFVALNYLVFPGLSDTEEEYDALKYLLRECRPDMVQFRNLNIDPDYLGTGIVFPSKPFGLQNLILRLKADFPGLILG
NYSRPVNREENTT
>Mature_413_residues
MRIVVARENGEFFDYPLQPAGRTGNFFTPIEKSELIKLPRGATLVLIPGSKALGFDKKGELRKTEYLAVAALLPQGYTRL
FLPAYIKENAERLPLFGYTAVVAYRGELYAAAAKTDDEFRWAPENYDLPELNAKIKEAKALFPENRLVRHLENCAVNYRC
FTAQNLFYRRWEGGIPVSPACNARCLGCISLQPADCCPSPQERIKFVPSIDEVASLMTYHLTGAGREGIVSFGQGCEGEP
SLQAGLIARAIMETRREVKSGTININTNGGNFPGLKEIIDAGVDSLRVSIISAREEIYESYYQPVNYNLEQVKRTIKYAK
EKDKFVALNYLVFPGLSDTEEEYDALKYLLRECRPDMVQFRNLNIDPDYLGTGIVFPSKPFGLQNLILRLKADFPGLILG
NYSRPVNREENTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46400; Mature: 46400

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVVARENGEFFDYPLQPAGRTGNFFTPIEKSELIKLPRGATLVLIPGSKALGFDKKGE
CEEEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCCC
LRKTEYLAVAALLPQGYTRLFLPAYIKENAERLPLFGYTAVVAYRGELYAAAAKTDDEFR
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHHEEEEECCCEEEEECCCCCCCE
WAPENYDLPELNAKIKEAKALFPENRLVRHLENCAVNYRCFTAQNLFYRRWEGGIPVSPA
ECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCC
CNARCLGCISLQPADCCPSPQERIKFVPSIDEVASLMTYHLTGAGREGIVSFGQGCEGEP
CCCEEEEEEECCCCCCCCCHHHHHEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
SLQAGLIARAIMETRREVKSGTININTNGGNFPGLKEIIDAGVDSLRVSIISAREEIYES
CHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
YYQPVNYNLEQVKRTIKYAKEKDKFVALNYLVFPGLSDTEEEYDALKYLLRECRPDMVQF
HCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH
RNLNIDPDYLGTGIVFPSKPFGLQNLILRLKADFPGLILGNYSRPVNREENTT
HCCCCCHHHCCCCEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRIVVARENGEFFDYPLQPAGRTGNFFTPIEKSELIKLPRGATLVLIPGSKALGFDKKGE
CEEEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCCC
LRKTEYLAVAALLPQGYTRLFLPAYIKENAERLPLFGYTAVVAYRGELYAAAAKTDDEFR
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHHEEEEECCCEEEEECCCCCCCE
WAPENYDLPELNAKIKEAKALFPENRLVRHLENCAVNYRCFTAQNLFYRRWEGGIPVSPA
ECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCC
CNARCLGCISLQPADCCPSPQERIKFVPSIDEVASLMTYHLTGAGREGIVSFGQGCEGEP
CCCEEEEEEECCCCCCCCCHHHHHEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
SLQAGLIARAIMETRREVKSGTININTNGGNFPGLKEIIDAGVDSLRVSIISAREEIYES
CHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
YYQPVNYNLEQVKRTIKYAKEKDKFVALNYLVFPGLSDTEEEYDALKYLLRECRPDMVQF
HCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH
RNLNIDPDYLGTGIVFPSKPFGLQNLILRLKADFPGLILGNYSRPVNREENTT
HCCCCCHHHCCCCEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA