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The map label for this gene is yibQ [H]

Identifier: 78044631

GI number: 78044631

Start: 1245610

End: 1246956

Strand: Direct

Name: yibQ [H]

Synonym: CHY_1392

Alternate gene names: 78044631

Gene position: 1245610-1246956 (Clockwise)

Preceding gene: 78045221

Following gene: 78044343

Centisome position: 51.87

GC content: 36.9

Gene sequence:

>1347_bases
ATGAAAAAACTTTTCTTTTCCCTTTTTTTTATCATCGGTTTTTGGGGAGCAAATTTTCCCGTTTATGTTAATTTGAACTC
TCAACCTCAATTAATTGTCATCGATCCCGGACACGGTGGAATCGATCCGGGAGCAGTTAACAGTTGGGTAAAAGAAAAAG
ACCTCAACTTAACTGCCTCTTTATATTTAAAACAATTTTTAGAAAATGCCGGCGCTATTGTAACCTTAACTCGAAACGGT
GATTACGATTTAAAAGACCTCTACCCTGGACCCGGTTCCCGCCAATTCAAGGACATTGAAAACCGGAAAAAGTACATTGA
AAACCTAAACCCAGACTTTTTTATTTCAATTCACGTTAATTCCGGGAACTTTAGAAAAAAGTATTTTGGTCAAGTTTTTT
ACGGAAGAAACCCCATAAATGCCGAATTTGCCAGTATTATACAGGATTCTCTCAATAAAATTTACAATGTTTCAAAATCA
CCCCAAATCGCAGATTTCCTAATTCTTTCTGCCAGTACCCCCGGAGTATTAATTGAAATAGGTTTTATTGATGATAAACG
GTTACAAAATAGCGATTTTTTAAAAAAGGTTTGTCAAGAAATTGCCAGTTCAATTATAAAATGCTTAAACCAAAAAAAGC
AGATTTCTCAACTAAAAGGCGAATCCAAATTGTTAATTATTATTGACGACTTCGGAAATAACAGCGATAGTCTGGTGGAT
TTTTTAAAACTTAAACTGCCCTTTACTGCTGCGGTTATGCCCTTTTTAAACAATACACATCAAGAAGCCAAAGCCCTTTA
CCAGAGTGGAAACGATATTATAATCCACTTGCCGATGGAGCCCAAAAGCTATAAACGTTCCTGGCTAGGACCAAGACCAA
TTATGGTTAATCTAACCCCACAAGAAATAACTTCGCTATTAATTGCAGCATTAAAAGAAAATCCTTGGGCAATTGGAATA
AATAATCACACCGGTTCCAGAGCCTGCGAAGATGAAAAAATAGTAAAAACAGTCCTTAGTTTTTGTCAAAAAAACAATTT
AGCGTTCATTGACAGTCAAACCACGCCTAATTCTCTCTTTCCCCTCTTGGGCAGTGAATTTGGGGTTGTGGTGTTAAAGC
GAGATATTTTCTTGGAAGTTAACGGCAAAGAGGAAAAAAACATCATTGAACAACTTAAAAAACTACAAAGCATCGCTCAA
AAAAAGAACTTGGGTATCGCCATTGGTCACGTTGGTTATGAAGGCGGAAAACCAACCGCCAACGCCCTTAAAAAAGTACT
ACCGGAACTGCAAAGACAGGGGTTTAAAATATGTACGTTAAGCGACCTCATTAAAAAACACCCCTAA

Upstream 100 bases:

>100_bases
GATAGAATTTATTAATGTTACTTTCATAACCGTCCCTCCTCTTGGATCGGGAATAAAACTCCCTTTTTTCTAAAAAATTA
TTAAAGAGGAGGTTATTAAT

Downstream 100 bases:

>100_bases
GAAGGGGTGTTTTCTTCATTTCCACCTTTAGCCAGGTAAGTATTAACTGGTCTTTGGGGAATTATGGTAGAAATTGCATG
TTTATAAATCATATGCTGTT

Product: putative N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKKLFFSLFFIIGFWGANFPVYVNLNSQPQLIVIDPGHGGIDPGAVNSWVKEKDLNLTASLYLKQFLENAGAIVTLTRNG
DYDLKDLYPGPGSRQFKDIENRKKYIENLNPDFFISIHVNSGNFRKKYFGQVFYGRNPINAEFASIIQDSLNKIYNVSKS
PQIADFLILSASTPGVLIEIGFIDDKRLQNSDFLKKVCQEIASSIIKCLNQKKQISQLKGESKLLIIIDDFGNNSDSLVD
FLKLKLPFTAAVMPFLNNTHQEAKALYQSGNDIIIHLPMEPKSYKRSWLGPRPIMVNLTPQEITSLLIAALKENPWAIGI
NNHTGSRACEDEKIVKTVLSFCQKNNLAFIDSQTTPNSLFPLLGSEFGVVVLKRDIFLEVNGKEEKNIIEQLKKLQSIAQ
KKNLGIAIGHVGYEGGKPTANALKKVLPELQRQGFKICTLSDLIKKHP

Sequences:

>Translated_448_residues
MKKLFFSLFFIIGFWGANFPVYVNLNSQPQLIVIDPGHGGIDPGAVNSWVKEKDLNLTASLYLKQFLENAGAIVTLTRNG
DYDLKDLYPGPGSRQFKDIENRKKYIENLNPDFFISIHVNSGNFRKKYFGQVFYGRNPINAEFASIIQDSLNKIYNVSKS
PQIADFLILSASTPGVLIEIGFIDDKRLQNSDFLKKVCQEIASSIIKCLNQKKQISQLKGESKLLIIIDDFGNNSDSLVD
FLKLKLPFTAAVMPFLNNTHQEAKALYQSGNDIIIHLPMEPKSYKRSWLGPRPIMVNLTPQEITSLLIAALKENPWAIGI
NNHTGSRACEDEKIVKTVLSFCQKNNLAFIDSQTTPNSLFPLLGSEFGVVVLKRDIFLEVNGKEEKNIIEQLKKLQSIAQ
KKNLGIAIGHVGYEGGKPTANALKKVLPELQRQGFKICTLSDLIKKHP
>Mature_448_residues
MKKLFFSLFFIIGFWGANFPVYVNLNSQPQLIVIDPGHGGIDPGAVNSWVKEKDLNLTASLYLKQFLENAGAIVTLTRNG
DYDLKDLYPGPGSRQFKDIENRKKYIENLNPDFFISIHVNSGNFRKKYFGQVFYGRNPINAEFASIIQDSLNKIYNVSKS
PQIADFLILSASTPGVLIEIGFIDDKRLQNSDFLKKVCQEIASSIIKCLNQKKQISQLKGESKLLIIIDDFGNNSDSLVD
FLKLKLPFTAAVMPFLNNTHQEAKALYQSGNDIIIHLPMEPKSYKRSWLGPRPIMVNLTPQEITSLLIAALKENPWAIGI
NNHTGSRACEDEKIVKTVLSFCQKNNLAFIDSQTTPNSLFPLLGSEFGVVVLKRDIFLEVNGKEEKNIIEQLKKLQSIAQ
KKNLGIAIGHVGYEGGKPTANALKKVLPELQRQGFKICTLSDLIKKHP

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=188, Percent_Identity=31.3829787234043, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 50217; Mature: 50217

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFFSLFFIIGFWGANFPVYVNLNSQPQLIVIDPGHGGIDPGAVNSWVKEKDLNLTAS
CHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
LYLKQFLENAGAIVTLTRNGDYDLKDLYPGPGSRQFKDIENRKKYIENLNPDFFISIHVN
HHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC
SGNFRKKYFGQVFYGRNPINAEFASIIQDSLNKIYNVSKSPQIADFLILSASTPGVLIEI
CCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
GFIDDKRLQNSDFLKKVCQEIASSIIKCLNQKKQISQLKGESKLLIIIDDFGNNSDSLVD
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
FLKLKLPFTAAVMPFLNNTHQEAKALYQSGNDIIIHLPMEPKSYKRSWLGPRPIMVNLTP
HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEEEEECH
QEITSLLIAALKENPWAIGINNHTGSRACEDEKIVKTVLSFCQKNNLAFIDSQTTPNSLF
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
PLLGSEFGVVVLKRDIFLEVNGKEEKNIIEQLKKLQSIAQKKNLGIAIGHVGYEGGKPTA
HHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
NALKKVLPELQRQGFKICTLSDLIKKHP
HHHHHHHHHHHHCCCEEEEHHHHHHCCC
>Mature Secondary Structure
MKKLFFSLFFIIGFWGANFPVYVNLNSQPQLIVIDPGHGGIDPGAVNSWVKEKDLNLTAS
CHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
LYLKQFLENAGAIVTLTRNGDYDLKDLYPGPGSRQFKDIENRKKYIENLNPDFFISIHVN
HHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC
SGNFRKKYFGQVFYGRNPINAEFASIIQDSLNKIYNVSKSPQIADFLILSASTPGVLIEI
CCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
GFIDDKRLQNSDFLKKVCQEIASSIIKCLNQKKQISQLKGESKLLIIIDDFGNNSDSLVD
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
FLKLKLPFTAAVMPFLNNTHQEAKALYQSGNDIIIHLPMEPKSYKRSWLGPRPIMVNLTP
HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEEEEECH
QEITSLLIAALKENPWAIGINNHTGSRACEDEKIVKTVLSFCQKNNLAFIDSQTTPNSLF
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
PLLGSEFGVVVLKRDIFLEVNGKEEKNIIEQLKKLQSIAQKKNLGIAIGHVGYEGGKPTA
HHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
NALKKVLPELQRQGFKICTLSDLIKKHP
HHHHHHHHHHHHCCCEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]