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The map label for this gene is yfmS [H]

Identifier: 78044580

GI number: 78044580

Start: 785982

End: 786797

Strand: Direct

Name: yfmS [H]

Synonym: CHY_0886

Alternate gene names: 78044580

Gene position: 785982-786797 (Clockwise)

Preceding gene: 78045162

Following gene: 78043666

Centisome position: 32.73

GC content: 39.46

Gene sequence:

>816_bases
ATGAAAATAAATAAAATCCTGGAAACTGTTTCTGATTATCAAAAATTATTTACTGAAGACGCAACGTTTATAGTTTCTGA
TCTGGAAAAGTATTTGTATTATCGTCCGGGGCGAATTGATTTTGGGTTTAAGCCGGGAGATAAAATAGTGGAAGGAACAT
TAATGGAGAGAGCGATGAAGCAAAACAAAAAAATTGTTGCCAGGGTTGAAAAAGAACAAAGCAAATTTGGATTTCCATAT
ATTGCAACGGTAATTCCTATAACTGATGAGGAAGGCGTTGTAGGAGCAATGGCGGTAGCTTTCAGTACGGAAACCCAGGA
TATGGTAATTAATATGTCGGCCGATTTAGCTCGAGTCACCGGCGAAATTAGGGAGTCGGCAACGGAATTTAGTACTTCAG
CTGCGGAGTTGGCAAATACAAACCAGCGAATTGCCGGTGAATCAAAGGAACTTCAAGCAGAAATTGCAGGTATTCAGGAA
ATTGTTAACTTAATCAATATAATTTCCGATAAAACACATATTTTAGGCTTAAATGCGGCGATTGAAGCTGCCCGAGTGGG
AGACAAAGGTCGGGGCTTTGCGGTGGTAGCGGAAGAAATAAGAAAACTTGCCCAGCAAACCAAGTTTTCGGCCCAGGATA
TTAGAAACAAGATAAATCAAAGCTTACATAGACTCAATGAATTAGTACAGAGCATTCAAAACCTGGCAGCGATAAGTGAG
GAACAAAGTGCGATGGCTCAGCAATTAACGGCAGCGATTGAAGAAATTTCAGGGGTAGCTGAGGATTTAAAGAATATTGC
ATTTAAGTTAAAATAA

Upstream 100 bases:

>100_bases
AAGGCTATGCCAGCCAGCTGCCGAAGGTGTGGATTTAGAGTTAAGCCTCCGCCTTTGGGCAGGAGGTTTTTATATTAATT
TAAAGGGAGGGGATGGAGAA

Downstream 100 bases:

>100_bases
ATTAAGAAGTGATTATGATTATAAAAGTTGTGAAGGAGGGAAAGGAATGCCGGTAATCCAGATTGATGCAGGGCCTATGT
CCAAGGAAAAAAAAGCGGAG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKINKILETVSDYQKLFTEDATFIVSDLEKYLYYRPGRIDFGFKPGDKIVEGTLMERAMKQNKKIVARVEKEQSKFGFPY
IATVIPITDEEGVVGAMAVAFSTETQDMVINMSADLARVTGEIRESATEFSTSAAELANTNQRIAGESKELQAEIAGIQE
IVNLINIISDKTHILGLNAAIEAARVGDKGRGFAVVAEEIRKLAQQTKFSAQDIRNKINQSLHRLNELVQSIQNLAAISE
EQSAMAQQLTAAIEEISGVAEDLKNIAFKLK

Sequences:

>Translated_271_residues
MKINKILETVSDYQKLFTEDATFIVSDLEKYLYYRPGRIDFGFKPGDKIVEGTLMERAMKQNKKIVARVEKEQSKFGFPY
IATVIPITDEEGVVGAMAVAFSTETQDMVINMSADLARVTGEIRESATEFSTSAAELANTNQRIAGESKELQAEIAGIQE
IVNLINIISDKTHILGLNAAIEAARVGDKGRGFAVVAEEIRKLAQQTKFSAQDIRNKINQSLHRLNELVQSIQNLAAISE
EQSAMAQQLTAAIEEISGVAEDLKNIAFKLK
>Mature_271_residues
MKINKILETVSDYQKLFTEDATFIVSDLEKYLYYRPGRIDFGFKPGDKIVEGTLMERAMKQNKKIVARVEKEQSKFGFPY
IATVIPITDEEGVVGAMAVAFSTETQDMVINMSADLARVTGEIRESATEFSTSAAELANTNQRIAGESKELQAEIAGIQE
IVNLINIISDKTHILGLNAAIEAARVGDKGRGFAVVAEEIRKLAQQTKFSAQDIRNKINQSLHRLNELVQSIQNLAAISE
EQSAMAQQLTAAIEEISGVAEDLKNIAFKLK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=142, Percent_Identity=35.2112676056338, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788195, Length=188, Percent_Identity=30.8510638297872, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789453, Length=100, Percent_Identity=42, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787690, Length=125, Percent_Identity=36.8, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI2367378, Length=104, Percent_Identity=37.5, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 29917; Mature: 29917

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKILETVSDYQKLFTEDATFIVSDLEKYLYYRPGRIDFGFKPGDKIVEGTLMERAMK
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
QNKKIVARVEKEQSKFGFPYIATVIPITDEEGVVGAMAVAFSTETQDMVINMSADLARVT
HCHHHHHHHHHHHHHCCCCEEHEEEEECCCCCCHHHHHHHHCCCCHHEEEECCHHHHHHH
GEIRESATEFSTSAAELANTNQRIAGESKELQAEIAGIQEIVNLINIISDKTHILGLNAA
HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHH
IEAARVGDKGRGFAVVAEEIRKLAQQTKFSAQDIRNKINQSLHRLNELVQSIQNLAAISE
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSAMAQQLTAAIEEISGVAEDLKNIAFKLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKINKILETVSDYQKLFTEDATFIVSDLEKYLYYRPGRIDFGFKPGDKIVEGTLMERAMK
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
QNKKIVARVEKEQSKFGFPYIATVIPITDEEGVVGAMAVAFSTETQDMVINMSADLARVT
HCHHHHHHHHHHHHHCCCCEEHEEEEECCCCCCHHHHHHHHCCCCHHEEEECCHHHHHHH
GEIRESATEFSTSAAELANTNQRIAGESKELQAEIAGIQEIVNLINIISDKTHILGLNAA
HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHH
IEAARVGDKGRGFAVVAEEIRKLAQQTKFSAQDIRNKINQSLHRLNELVQSIQNLAAISE
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSAMAQQLTAAIEEISGVAEDLKNIAFKLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]