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The map label for this gene is kaiC [H]

Identifier: 78045162

GI number: 78045162

Start: 784441

End: 785331

Strand: Direct

Name: kaiC [H]

Synonym: CHY_0885

Alternate gene names: 78045162

Gene position: 784441-785331 (Clockwise)

Preceding gene: 78042732

Following gene: 78044580

Centisome position: 32.66

GC content: 39.84

Gene sequence:

>891_bases
TTGGAGAGATTGGTGACGGGTATAGAAAACTTTGATGAGGTTTTAGGCGGTGGTATTCCCTTGTATTCAATAAATATTAT
CGCTGGTAATCCCGGCAGTGGTAAAACGATTTTAGTTCAAAACATTTTATTTAACGCAGCAAGGAGAGGATTAAAGAGTT
TATATTTTACCACCGTTTCCGAAAGCCAGTTTAAAATGGTAAGAAACTTGGCTGATTTTGAGTTTTTTGATAATAGCTTT
TTAGGTGAACAAATTATTTACCGGGACTTAGGGCTTATCTTGAAAAAAGAGGGGCTTAATGGTGCGTTTGCTGCTGTTGA
TGATTTAATGAAAAAATTTAGACCGGATATTCTGGTAATTGACAGCTTTAAAGCTTTAAGAAGTCTTGTTGATAGCGAAA
AAGAGTTCCGAGCCATGGTTTTTGAGTTAGCCTCTAAGTTGGCGGTTTGGGAAACCACTACTTTTTTAGTTGGAGAGTAC
ATAGAGGAAGAGTTGAGCACTTTATCGGAGTTTGCTATTGCTGACGGCATCATCTATCTTTATGGCCAGCAGGAGCGGAA
ATTCCAGAAGCGGTATTTAAGAATCCTGAAGATGCGTGGAACCGGGACAATTCCCGGGGAACATATTTTTTTAATTGGTA
AAGATGGAATTAAGCTTTATCCCCGAATGTTACTAAGTCAAGAAGAATTGGTTTATGATGTGGAAAAGGGTTTAGGTTTA
GAAGTGCGGGATAATTTTGGTATTGAAGGGCTTGATAATCTCTTAGGTGGTGGAATTTACCGGGGAAGCTCAACTCTTTT
GGCGGGAGCTACCGGTACCGGGAAAACCCTTTTTAGCTTAAAGTTTGCTTTGGAAGCGGCCCAAAGGGGAGAAAAAGAGC
CTAAGTGCTGA

Upstream 100 bases:

>100_bases
CAAAATTTACCACAAAATATGTGGGGATTATCGCCAAACTGGTGGATCCGAAAACACTACAAAACCTAAAAGAGAAATTA
GAAAGAAAGGGGTTTTAACA

Downstream 100 bases:

>100_bases
AGCTTGGCTCTTTTTTGTTTTTAGGGCGTAATCAAGTTTTTCCGAATGTTCTTTAAGGGTAATTTTTATTTCAGCAACAT
CTTTTTTAAGTTCTGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MERLVTGIENFDEVLGGGIPLYSINIIAGNPGSGKTILVQNILFNAARRGLKSLYFTTVSESQFKMVRNLADFEFFDNSF
LGEQIIYRDLGLILKKEGLNGAFAAVDDLMKKFRPDILVIDSFKALRSLVDSEKEFRAMVFELASKLAVWETTTFLVGEY
IEEELSTLSEFAIADGIIYLYGQQERKFQKRYLRILKMRGTGTIPGEHIFLIGKDGIKLYPRMLLSQEELVYDVEKGLGL
EVRDNFGIEGLDNLLGGGIYRGSSTLLAGATGTGKTLFSLKFALEAAQRGEKEPKC

Sequences:

>Translated_296_residues
MERLVTGIENFDEVLGGGIPLYSINIIAGNPGSGKTILVQNILFNAARRGLKSLYFTTVSESQFKMVRNLADFEFFDNSF
LGEQIIYRDLGLILKKEGLNGAFAAVDDLMKKFRPDILVIDSFKALRSLVDSEKEFRAMVFELASKLAVWETTTFLVGEY
IEEELSTLSEFAIADGIIYLYGQQERKFQKRYLRILKMRGTGTIPGEHIFLIGKDGIKLYPRMLLSQEELVYDVEKGLGL
EVRDNFGIEGLDNLLGGGIYRGSSTLLAGATGTGKTLFSLKFALEAAQRGEKEPKC
>Mature_296_residues
MERLVTGIENFDEVLGGGIPLYSINIIAGNPGSGKTILVQNILFNAARRGLKSLYFTTVSESQFKMVRNLADFEFFDNSF
LGEQIIYRDLGLILKKEGLNGAFAAVDDLMKKFRPDILVIDSFKALRSLVDSEKEFRAMVFELASKLAVWETTTFLVGEY
IEEELSTLSEFAIADGIIYLYGQQERKFQKRYLRILKMRGTGTIPGEHIFLIGKDGIKLYPRMLLSQEELVYDVEKGLGL
EVRDNFGIEGLDNLLGGGIYRGSSTLLAGATGTGKTLFSLKFALEAAQRGEKEPKC

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 33018; Mature: 33018

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLVTGIENFDEVLGGGIPLYSINIIAGNPGSGKTILVQNILFNAARRGLKSLYFTTVS
CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
ESQFKMVRNLADFEFFDNSFLGEQIIYRDLGLILKKEGLNGAFAAVDDLMKKFRPDILVI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCEEEE
DSFKALRSLVDSEKEFRAMVFELASKLAVWETTTFLVGEYIEEELSTLSEFAIADGIIYL
ECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
YGQQERKFQKRYLRILKMRGTGTIPGEHIFLIGKDGIKLYPRMLLSQEELVYDVEKGLGL
ECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCE
EVRDNFGIEGLDNLLGGGIYRGSSTLLAGATGTGKTLFSLKFALEAAQRGEKEPKC
EEECCCCCCCHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MERLVTGIENFDEVLGGGIPLYSINIIAGNPGSGKTILVQNILFNAARRGLKSLYFTTVS
CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
ESQFKMVRNLADFEFFDNSFLGEQIIYRDLGLILKKEGLNGAFAAVDDLMKKFRPDILVI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCEEEE
DSFKALRSLVDSEKEFRAMVFELASKLAVWETTTFLVGEYIEEELSTLSEFAIADGIIYL
ECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
YGQQERKFQKRYLRILKMRGTGTIPGEHIFLIGKDGIKLYPRMLLSQEELVYDVEKGLGL
ECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCE
EVRDNFGIEGLDNLLGGGIYRGSSTLLAGATGTGKTLFSLKFALEAAQRGEKEPKC
EEECCCCCCCHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917641 [H]