| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044493
Identifier: 78044493
GI number: 78044493
Start: 471694
End: 471975
Strand: Direct
Name: 78044493
Synonym: CHY_0543
Alternate gene names: NA
Gene position: 471694-471975 (Clockwise)
Preceding gene: 78044200
Following gene: 78042966
Centisome position: 19.64
GC content: 43.26
Gene sequence:
>282_bases ATGGAAGTAGGCGAAGTAATTACCCTCGTTGATGAGGAACAAAATGAATTTGAATTTGCCGTCATTGACCTTCTTGAAGT TGAAGGCAAGAAGTACGCAATCTTGGTTCCGGCAGTGGAGGAAGACGAAGAAGAGTTAGAAGATGAAGAAGAAGCGGTGA TCCTCCGTTTAGAGATGGACGAGGATGGTAACGAAATTTTAGTTGACCTGGAAGATGAAGAATGGGAAATGGTTGCCGAT GCCTGGACCGAAAAAATGGAAGATGAAGGTTCAGATGAGTAA
Upstream 100 bases:
>100_bases CCGCCGGAAGCGAAAAAAGGTAATTGATAAGCTGGCGGCAACGCTCATCCTTTCGGGTTATCTAAATTATAAAAGTAAAA ATTAGAAAGAGGTGGAATCT
Downstream 100 bases:
>100_bases AAAGAAAGCTTTTAAAGCTTTCTTTTTTTGTGGCATAAAAGGAAAAAAAGAAAAAACGTAGTATTATATAACGGTACCAA ATTATTAGTTTAGGTGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MEVGEVITLVDEEQNEFEFAVIDLLEVEGKKYAILVPAVEEDEEELEDEEEAVILRLEMDEDGNEILVDLEDEEWEMVAD AWTEKMEDEGSDE
Sequences:
>Translated_93_residues MEVGEVITLVDEEQNEFEFAVIDLLEVEGKKYAILVPAVEEDEEELEDEEEAVILRLEMDEDGNEILVDLEDEEWEMVAD AWTEKMEDEGSDE >Mature_93_residues MEVGEVITLVDEEQNEFEFAVIDLLEVEGKKYAILVPAVEEDEEELEDEEEAVILRLEMDEDGNEILVDLEDEEWEMVAD AWTEKMEDEGSDE
Specific function: Unknown
COG id: COG3906
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0473 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y543_CARHZ (Q3AEN3)
Other databases:
- EMBL: CP000141 - RefSeq: YP_359401.1 - STRING: Q3AEN3 - GeneID: 3727612 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_0543 - NMPDR: fig|246194.3.peg.76 - TIGR: CHY_0543 - eggNOG: NOG135709 - HOGENOM: HBG726191 - OMA: LENVFEI - BioCyc: CHYD246194:CHY_0543-MONOMER - HAMAP: MF_01448 - InterPro: IPR009711
Pfam domain/function: PF06949 DUF1292
EC number: NA
Molecular weight: Translated: 10768; Mature: 10768
Theoretical pI: Translated: 3.18; Mature: 3.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVGEVITLVDEEQNEFEFAVIDLLEVEGKKYAILVPAVEEDEEELEDEEEAVILRLEMD CCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHCCCCCCEEEEEEEEC EDGNEILVDLEDEEWEMVADAWTEKMEDEGSDE CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEVGEVITLVDEEQNEFEFAVIDLLEVEGKKYAILVPAVEEDEEELEDEEEAVILRLEMD CCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHCCCCCCEEEEEEEEC EDGNEILVDLEDEEWEMVADAWTEKMEDEGSDE CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA