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The map label for this gene is yoaR [H]

Identifier: 78042966

GI number: 78042966

Start: 472079

End: 473476

Strand: Direct

Name: yoaR [H]

Synonym: CHY_0544

Alternate gene names: 78042966

Gene position: 472079-473476 (Clockwise)

Preceding gene: 78044493

Following gene: 78043738

Centisome position: 19.66

GC content: 41.13

Gene sequence:

>1398_bases
ATGAAAAAGAGCTACATAATTTTAACTGTATTAATTGCCCTGGTGATTATGTTTTTAGCTGGCATTGTGGGTTTTTCTTA
CTATACCTACATAAAGCCTTACCAGGGGAAAATCGCGTACGGCGTGACCGTGGAAGGTGAGCCGGTAGGGGGCATGACTT
TTAAGGAATTTAAACGTTACTTGGAGGGATTAAATAACGAACTTCAAAATCAACCGGTAGTGCTAACCCTTGGTAATAAA
ACCTGGACTTATAAAAAAGGCGACCTTGGTATATCGTTAAATACCGCTGAAATGTACCGGAAAGCTTATGAATTAGGGCG
TAAAGGTTCGTTATTAAAACAAATTATGGAAAGACGGCAATTAAACAAAGCAGCAGTCGATATAAAATATCTTGTTCGAC
TTGAGGAAAGAAAGCTTTTGGCCAAGCTTGACCAAATCAATAAGGAAATTTATGTCGAACCCAAAAACGCGGAGTTTCGC
CTTTTGCCCAATGAAACTTTTGCCATAATTCCCCATAAAACAGGTATTGCCCTGGATAGTGAACAGGCTGTTAAAGATGT
GCGGGCAAATTTACTGGAAAATCCTCTAAAAGTAAGTTTTAAGTTAAAAGAAGTATTGCCGGACAAAACCACCGAAGACA
TAAAAAAGATGCGTTTAACCGGTCTTTTAGCAAGTTTTACCACGAGCTTTGATGTCAGGAAAGTTAACCGGTCTTATAAT
ATTGGAGTAGCTGCCGGAAAGCTAAACGGTATTTTAATAGCTCCGGGGGAAGTGTTTTCCTTTAATAAAACGGTGGGCCC
GAGGAGTGCCAAAGAAGGATATAAAAATGCCCCGGTGATTTTACGGGACCAGTTGGTAGAAGCGCTGGGCGGTGGGGTTT
GTCAGGTATCGACAACTCTTTATAATGCGGTTTTGCTGGCCAATTTACCGATTGTTGAGCGGCATAACCATTCCCTGCCG
GTAGCGTATGTGCCGCCGGGTCGGGATGCGACGGTAACCGACGGGGGCAAAGACTTTAAATTTAAAAATAACCTGCCCTG
TTACTTGTATATTAAATCTTACGTTAACGGCAATCGGATTACCTTTAAAATCTTTGGGGATGCCAGCTTAAAAAAGCACG
TGGTGATTAAAAGCTGGGTTACGAAAACTATTCCTTATAAGACAATTATCATAAAAGACTCAAGCCTTCCCGAAGGGAAA
AAGGTTGTTAAACAGGAAGGAGCCCTTGGCAAGTATGCCAAAGCCCAGCGAATAGTCTACCAAAACGGCCGGGTAGTAAA
AGTGGAAAACTTAAGGGACAGTTACTACAAACCAATGAATGAAATTATCCTGGTAGGAACCAAGAAAGTTCCAAACTCTT
CTGCAAAGGAAAGTTCAGTAACGGAAAATGTTTATTAA

Upstream 100 bases:

>100_bases
GAAAGCTTTTAAAGCTTTCTTTTTTTGTGGCATAAAAGGAAAAAAAGAAAAAACGTAGTATTATATAACGGTACCAAATT
ATTAGTTTAGGTGGGGAAAA

Downstream 100 bases:

>100_bases
TATTTAGAGGAGAGGATTGGATGATTTTAGTTACCGGTGGAGCTGGTTATATTGGTTCTCACATAGTTCGGCAGTTATGC
CTAAAAAATGAAAAAGTTTT

Product: vanW domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKKSYIILTVLIALVIMFLAGIVGFSYYTYIKPYQGKIAYGVTVEGEPVGGMTFKEFKRYLEGLNNELQNQPVVLTLGNK
TWTYKKGDLGISLNTAEMYRKAYELGRKGSLLKQIMERRQLNKAAVDIKYLVRLEERKLLAKLDQINKEIYVEPKNAEFR
LLPNETFAIIPHKTGIALDSEQAVKDVRANLLENPLKVSFKLKEVLPDKTTEDIKKMRLTGLLASFTTSFDVRKVNRSYN
IGVAAGKLNGILIAPGEVFSFNKTVGPRSAKEGYKNAPVILRDQLVEALGGGVCQVSTTLYNAVLLANLPIVERHNHSLP
VAYVPPGRDATVTDGGKDFKFKNNLPCYLYIKSYVNGNRITFKIFGDASLKKHVVIKSWVTKTIPYKTIIIKDSSLPEGK
KVVKQEGALGKYAKAQRIVYQNGRVVKVENLRDSYYKPMNEIILVGTKKVPNSSAKESSVTENVY

Sequences:

>Translated_465_residues
MKKSYIILTVLIALVIMFLAGIVGFSYYTYIKPYQGKIAYGVTVEGEPVGGMTFKEFKRYLEGLNNELQNQPVVLTLGNK
TWTYKKGDLGISLNTAEMYRKAYELGRKGSLLKQIMERRQLNKAAVDIKYLVRLEERKLLAKLDQINKEIYVEPKNAEFR
LLPNETFAIIPHKTGIALDSEQAVKDVRANLLENPLKVSFKLKEVLPDKTTEDIKKMRLTGLLASFTTSFDVRKVNRSYN
IGVAAGKLNGILIAPGEVFSFNKTVGPRSAKEGYKNAPVILRDQLVEALGGGVCQVSTTLYNAVLLANLPIVERHNHSLP
VAYVPPGRDATVTDGGKDFKFKNNLPCYLYIKSYVNGNRITFKIFGDASLKKHVVIKSWVTKTIPYKTIIIKDSSLPEGK
KVVKQEGALGKYAKAQRIVYQNGRVVKVENLRDSYYKPMNEIILVGTKKVPNSSAKESSVTENVY
>Mature_465_residues
MKKSYIILTVLIALVIMFLAGIVGFSYYTYIKPYQGKIAYGVTVEGEPVGGMTFKEFKRYLEGLNNELQNQPVVLTLGNK
TWTYKKGDLGISLNTAEMYRKAYELGRKGSLLKQIMERRQLNKAAVDIKYLVRLEERKLLAKLDQINKEIYVEPKNAEFR
LLPNETFAIIPHKTGIALDSEQAVKDVRANLLENPLKVSFKLKEVLPDKTTEDIKKMRLTGLLASFTTSFDVRKVNRSYN
IGVAAGKLNGILIAPGEVFSFNKTVGPRSAKEGYKNAPVILRDQLVEALGGGVCQVSTTLYNAVLLANLPIVERHNHSLP
VAYVPPGRDATVTDGGKDFKFKNNLPCYLYIKSYVNGNRITFKIFGDASLKKHVVIKSWVTKTIPYKTIIIKDSSLPEGK
KVVKQEGALGKYAKAQRIVYQNGRVVKVENLRDSYYKPMNEIILVGTKKVPNSSAKESSVTENVY

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 52105; Mature: 52105

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSYIILTVLIALVIMFLAGIVGFSYYTYIKPYQGKIAYGVTVEGEPVGGMTFKEFKRY
CCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCCCCCHHHHHHH
LEGLNNELQNQPVVLTLGNKTWTYKKGDLGISLNTAEMYRKAYELGRKGSLLKQIMERRQ
HHHHHHHHCCCCEEEEECCEEEEEECCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHH
LNKAAVDIKYLVRLEERKLLAKLDQINKEIYVEPKNAEFRLLPNETFAIIPHKTGIALDS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEECCCCCEECH
EQAVKDVRANLLENPLKVSFKLKEVLPDKTTEDIKKMRLTGLLASFTTSFDVRKVNRSYN
HHHHHHHHHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCE
IGVAAGKLNGILIAPGEVFSFNKTVGPRSAKEGYKNAPVILRDQLVEALGGGVCQVSTTL
EEEEEECCCEEEECCCCEEEECCCCCCCCHHCCCCCCCEEHHHHHHHHHCCCEEEEHHHH
YNAVLLANLPIVERHNHSLPVAYVPPGRDATVTDGGKDFKFKNNLPCYLYIKSYVNGNRI
HHHHHHHCCCEEECCCCCCCEEECCCCCCCEECCCCCCCEECCCCCEEEEEEECCCCCEE
TFKIFGDASLKKHVVIKSWVTKTIPYKTIIIKDSSLPEGKKVVKQEGALGKYAKAQRIVY
EEEEECCCCCCHHEEHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHEEEE
QNGRVVKVENLRDSYYKPMNEIILVGTKKVPNSSAKESSVTENVY
CCCCEEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKSYIILTVLIALVIMFLAGIVGFSYYTYIKPYQGKIAYGVTVEGEPVGGMTFKEFKRY
CCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCCCCCHHHHHHH
LEGLNNELQNQPVVLTLGNKTWTYKKGDLGISLNTAEMYRKAYELGRKGSLLKQIMERRQ
HHHHHHHHCCCCEEEEECCEEEEEECCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHH
LNKAAVDIKYLVRLEERKLLAKLDQINKEIYVEPKNAEFRLLPNETFAIIPHKTGIALDS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEECCCCCEECH
EQAVKDVRANLLENPLKVSFKLKEVLPDKTTEDIKKMRLTGLLASFTTSFDVRKVNRSYN
HHHHHHHHHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCE
IGVAAGKLNGILIAPGEVFSFNKTVGPRSAKEGYKNAPVILRDQLVEALGGGVCQVSTTL
EEEEEECCCEEEECCCCEEEECCCCCCCCHHCCCCCCCEEHHHHHHHHHCCCEEEEHHHH
YNAVLLANLPIVERHNHSLPVAYVPPGRDATVTDGGKDFKFKNNLPCYLYIKSYVNGNRI
HHHHHHHCCCEEECCCCCCCEEECCCCCCCEECCCCCCCEECCCCCEEEEEEECCCCCEE
TFKIFGDASLKKHVVIKSWVTKTIPYKTIIIKDSSLPEGKKVVKQEGALGKYAKAQRIVY
EEEEECCCCCCHHEEHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHEEEE
QNGRVVKVENLRDSYYKPMNEIILVGTKKVPNSSAKESSVTENVY
CCCCEEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]