| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044257
Identifier: 78044257
GI number: 78044257
Start: 342674
End: 343183
Strand: Direct
Name: 78044257
Synonym: CHY_0400
Alternate gene names: NA
Gene position: 342674-343183 (Clockwise)
Preceding gene: 78043241
Following gene: 78043306
Centisome position: 14.27
GC content: 45.49
Gene sequence:
>510_bases ATGCGCTGGACGAAAGAAGCATTAGAGTACATGAATAACGTTCCCTTTTTTGTGCGGGAAAAAGCCAAGAAAAAGGTAGA GGAGTGGGCGAAGCAAAAGGGTGTAGAGGAGATCACGGTAAATGAAGTAATGGAAGCCCGGGGGAAAATGACCGCCAGGG ATGTAAGCGACCCGAAACCGCAAAAACCCAAAATTGCGGTGGTGCGCTGTCATATTGTTTCCGAGGTTTGCCCTGGAATT GGTTGTTTTAATAGCTTTAATAAAAGGGAGCAGCAGTTTGCCCGCTATGGGCCTGAGGCAGAAATTATCGGCTTTTTCAC CTGCGGTGGTTGCTCCGGGCGCCGCGTTTCCAGGCTTATTGAAAAACTTCTCCCTTATGAATTAACGCACGTTCATTTAA GTTCCTGTATGTTGTTAGACGGAGATTATCCCAGGTGTCCTTTCAAAGAGCAAATTAAAAAAACTATTTTGGCAAAAGGT GTAGAGGTAGTTGAAGGAACCCACCATTAA
Upstream 100 bases:
>100_bases GCGCCCAAAGGTATCCCGAGGCGTAAAACTGTGATAAAAGTCATAGCTCTAAAAGGAAAGCCCAGGTTAAAATAAGAAAA AACAAAAGGGGAAGAAGAAG
Downstream 100 bases:
>100_bases AACCCTGCAGTTGCAGGGTTTTTGTTTTATATTTTTATATTTTACTTAGTATATTTTTGCTTAGCATAATAATATAAACT AAGTAGATAATAAAACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRWTKEALEYMNNVPFFVREKAKKKVEEWAKQKGVEEITVNEVMEARGKMTARDVSDPKPQKPKIAVVRCHIVSEVCPGI GCFNSFNKREQQFARYGPEAEIIGFFTCGGCSGRRVSRLIEKLLPYELTHVHLSSCMLLDGDYPRCPFKEQIKKTILAKG VEVVEGTHH
Sequences:
>Translated_169_residues MRWTKEALEYMNNVPFFVREKAKKKVEEWAKQKGVEEITVNEVMEARGKMTARDVSDPKPQKPKIAVVRCHIVSEVCPGI GCFNSFNKREQQFARYGPEAEIIGFFTCGGCSGRRVSRLIEKLLPYELTHVHLSSCMLLDGDYPRCPFKEQIKKTILAKG VEVVEGTHH >Mature_169_residues MRWTKEALEYMNNVPFFVREKAKKKVEEWAKQKGVEEITVNEVMEARGKMTARDVSDPKPQKPKIAVVRCHIVSEVCPGI GCFNSFNKREQQFARYGPEAEIIGFFTCGGCSGRRVSRLIEKLLPYELTHVHLSSCMLLDGDYPRCPFKEQIKKTILAKG VEVVEGTHH
Specific function: Unknown
COG id: COG5561
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19316; Mature: 19316
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWTKEALEYMNNVPFFVREKAKKKVEEWAKQKGVEEITVNEVMEARGKMTARDVSDPKP CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC QKPKIAVVRCHIVSEVCPGIGCFNSFNKREQQFARYGPEAEIIGFFTCGGCSGRRVSRLI CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH EKLLPYELTHVHLSSCMLLDGDYPRCPFKEQIKKTILAKGVEVVEGTHH HHHCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCHHHHCCCCC >Mature Secondary Structure MRWTKEALEYMNNVPFFVREKAKKKVEEWAKQKGVEEITVNEVMEARGKMTARDVSDPKP CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC QKPKIAVVRCHIVSEVCPGIGCFNSFNKREQQFARYGPEAEIIGFFTCGGCSGRRVSRLI CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH EKLLPYELTHVHLSSCMLLDGDYPRCPFKEQIKKTILAKGVEVVEGTHH HHHCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA