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The map label for this gene is ydcQ [C]

Identifier: 78044178

GI number: 78044178

Start: 2238227

End: 2238640

Strand: Direct

Name: ydcQ [C]

Synonym: CHY_2497

Alternate gene names: 78044178

Gene position: 2238227-2238640 (Clockwise)

Preceding gene: 78043385

Following gene: 78043100

Centisome position: 93.2

GC content: 36.47

Gene sequence:

>414_bases
ATGTATAAGGACTTATATGTGTTCCCTGCCATTTTTGACTATGCCGAAGATGGTATTTCCGTTGAATTCCCTGACCTTCC
CGGATGTTTAACCTGTGGTGATAACACGGAAGAAGCTTTAAAAAATGCTAAAGAAGCTCTTGAACTTCATCTGTATGGTA
TGGAAAAAGACAATGAGCCAATTCCTGAACCAACACCTATAGACAAAATTAAAATTGAACCCAATCAAGTTCTCGTATTG
GTAGAAGCCTGGATGCCATTAGTTCGCAGTGAAATGGATAATAAAGCGGTTAAAAAAACATTAACTTTACCAAAGTGGTT
AAACGACCTAGCTGAAAAAAAGAAAATTAATTTTTCTCGTGTTCTCCAGCAGGCTTTGAAGGAACAATTAGGTATAAAAG
AACGGGAAATATAA

Upstream 100 bases:

>100_bases
ACCAATAAAAACAGTAAAAAGCATACTAAAACAAGCAGGTATCGAAATTGAATAGTTCACTAATATCTTCTTTCAAAAAT
CTTAACGGAGGTTTTTATTT

Downstream 100 bases:

>100_bases
CTTTAATTTTAATTTAACTATCTTGTTTATAATTCATTAACCTAAAGTCGATTTCTCATTGCTTTTATTTGTTTTATTCG
TTTTTTTAAAGATTCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MYKDLYVFPAIFDYAEDGISVEFPDLPGCLTCGDNTEEALKNAKEALELHLYGMEKDNEPIPEPTPIDKIKIEPNQVLVL
VEAWMPLVRSEMDNKAVKKTLTLPKWLNDLAEKKKINFSRVLQQALKEQLGIKEREI

Sequences:

>Translated_137_residues
MYKDLYVFPAIFDYAEDGISVEFPDLPGCLTCGDNTEEALKNAKEALELHLYGMEKDNEPIPEPTPIDKIKIEPNQVLVL
VEAWMPLVRSEMDNKAVKKTLTLPKWLNDLAEKKKINFSRVLQQALKEQLGIKEREI
>Mature_137_residues
MYKDLYVFPAIFDYAEDGISVEFPDLPGCLTCGDNTEEALKNAKEALELHLYGMEKDNEPIPEPTPIDKIKIEPNQVLVL
VEAWMPLVRSEMDNKAVKKTLTLPKWLNDLAEKKKINFSRVLQQALKEQLGIKEREI

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15702; Mature: 15702

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKDLYVFPAIFDYAEDGISVEFPDLPGCLTCGDNTEEALKNAKEALELHLYGMEKDNEP
CCCCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHEECCCCCCCC
IPEPTPIDKIKIEPNQVLVLVEAWMPLVRSEMDNKAVKKTLTLPKWLNDLAEKKKINFSR
CCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
VLQQALKEQLGIKEREI
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYKDLYVFPAIFDYAEDGISVEFPDLPGCLTCGDNTEEALKNAKEALELHLYGMEKDNEP
CCCCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHEECCCCCCCC
IPEPTPIDKIKIEPNQVLVLVEAWMPLVRSEMDNKAVKKTLTLPKWLNDLAEKKKINFSR
CCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
VLQQALKEQLGIKEREI
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA