| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043385
Identifier: 78043385
GI number: 78043385
Start: 2237984
End: 2238181
Strand: Direct
Name: 78043385
Synonym: CHY_2496
Alternate gene names: NA
Gene position: 2237984-2238181 (Clockwise)
Preceding gene: 78044061
Following gene: 78044178
Centisome position: 93.19
GC content: 33.84
Gene sequence:
>198_bases ATGAAGGCATATTCATCAAGGGAAATAATAGAAATACTTAAAAATGATGGTTGGTTTCTCTATGAAGTTCGGGGAGACCA CCATCAATTTAAGCATCCTGTAAAGAAAGGAAAAGTTACGGTGCCTCATCCCAAGAAAAATATACCAATAAAAACAGTAA AAAGCATACTAAAACAAGCAGGTATCGAAATTGAATAG
Upstream 100 bases:
>100_bases GACACGTGTATATATACGTATTATAATTTACTCAGGAACAACTTATTAGAAAATAAATCTTATAACGCTGTTGATATATA AATTTCCAGGGAGAAGTTAA
Downstream 100 bases:
>100_bases TTCACTAATATCTTCTTTCAAAAATCTTAACGGAGGTTTTTATTTATGTATAAGGACTTATATGTGTTCCCTGCCATTTT TGACTATGCCGAAGATGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic Or Secreted Lipoprotein; YcfA-Like; YcfA Superfamily Protein; Conserved Domain Protein; Conserved Protein
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MKAYSSREIIEILKNDGWFLYEVRGDHHQFKHPVKKGKVTVPHPKKNIPIKTVKSILKQAGIEIE
Sequences:
>Translated_65_residues MKAYSSREIIEILKNDGWFLYEVRGDHHQFKHPVKKGKVTVPHPKKNIPIKTVKSILKQAGIEIE >Mature_65_residues MKAYSSREIIEILKNDGWFLYEVRGDHHQFKHPVKKGKVTVPHPKKNIPIKTVKSILKQAGIEIE
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7550; Mature: 7550
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYSSREIIEILKNDGWFLYEVRGDHHQFKHPVKKGKVTVPHPKKNIPIKTVKSILKQA CCCCCHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHC GIEIE CCCCC >Mature Secondary Structure MKAYSSREIIEILKNDGWFLYEVRGDHHQFKHPVKKGKVTVPHPKKNIPIKTVKSILKQA CCCCCHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHC GIEIE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA