| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044148
Identifier: 78044148
GI number: 78044148
Start: 314597
End: 315652
Strand: Direct
Name: 78044148
Synonym: CHY_0365
Alternate gene names: NA
Gene position: 314597-315652 (Clockwise)
Preceding gene: 78044652
Following gene: 78043834
Centisome position: 13.1
GC content: 60.13
Gene sequence:
>1056_bases ATGTCAACATCAGGTAGTGCTGTAGAAGTTCGTCGGATCGATGCGCTTTTGCTCCGTGCACTGTACGGAGGTTCCAAATC CTACTGGGAATTGATGCGAGCTGGGCAAGCGCAGACCCACCAAGTGCTGAAGGTCCTGCAGTCGCTCTTGGAGAGCAAGC TTGTGACCTACGACGGTGAGCGCTTCGTGCTCACCGAAGCGGGACGCCGGCAGGTCGAAGCCTTAGGGCTGGATCGGGTG GCCGAGCAGCGCTGTGAGACCTGTGCGGGACGAGGCATCGTCCTGCGCCCGCCTTTCGACCGGGTCCTTGAAACATTCCA AAAAATGGTGACCATGCGGCCAAAAGCAACGCCCAACTTTGACCAGGGGTATGTGACGGTGGAGACCACCGTGCTACGTC TGGCCCTGATGGCCCAGCGGGGCGATCTGGTGGGTCGCGATCTCCTGCTGTTAGGCGATGATGACCTTACGGCCATTGCG GCCGCGCTCTCAGGATTACCGCGGCGCATCTTCGTCCTGGATGTGGACGAACGCATTGTTGGCTTCATCCGCGACGTAGC CCGGGACCGGGGTTGGGACAACGTCCACGCTGAAGTCTACGATGTGCAAGATCCGCTGCCCGAGAACCTGCGGGGCCAGT TCGACGTGTTCTTCACCGATCCGGTGGAAACGGTGCGCGGTATCTTCCTCTTCTTGAGCCGTTGCACCGAAGCGTTGCGG GGTCCCGGTTCGGCCGGGTATTTCGGCCTTTCATTCCTCGAAGCCTCTTGGAAAAAGTGGCGCGACATCCAGCGCGGCAT CCTTGATATGGGATTTGCCATCACCGATATGCTCGGGGCTTTCCAGGAATACCAGCTGGAAAACATCGTGGCCCAGGGTT ATCCGGTGGCCCGCATGGCGCCGGTGGCGGTCAAGGAGCCCGATGTTTCCTTCTACGTGAGCACCGTCTACCGCCTGGAG CTAACCGAAGAACCGCGGCCCCTCTTTACCGGCCGGGTGGAGCTCGGGCGGGACCTGTATTACGACGACGAAGCATGTGT TACACTCCCCCGATAA
Upstream 100 bases:
>100_bases ATAAAAAGAGGTATAATACGTATTTGGCAATTTCTCCGAGTGGACCAGGGAAAATGGAGCAAGGTCCGTTTCTATTCTTT GAGGGAAAGGAGCGGTACCT
Downstream 100 bases:
>100_bases TCTCCGAAAAATTTGCGCCCCGGTGGGGGGTATTTCCGCCACCGGGGCGCATACGTTTAAGAACGGCGGAATAACAGATA TTACTTGACAAAAAAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSTSGSAVEVRRIDALLLRALYGGSKSYWELMRAGQAQTHQVLKVLQSLLESKLVTYDGERFVLTEAGRRQVEALGLDRV AEQRCETCAGRGIVLRPPFDRVLETFQKMVTMRPKATPNFDQGYVTVETTVLRLALMAQRGDLVGRDLLLLGDDDLTAIA AALSGLPRRIFVLDVDERIVGFIRDVARDRGWDNVHAEVYDVQDPLPENLRGQFDVFFTDPVETVRGIFLFLSRCTEALR GPGSAGYFGLSFLEASWKKWRDIQRGILDMGFAITDMLGAFQEYQLENIVAQGYPVARMAPVAVKEPDVSFYVSTVYRLE LTEEPRPLFTGRVELGRDLYYDDEACVTLPR
Sequences:
>Translated_351_residues MSTSGSAVEVRRIDALLLRALYGGSKSYWELMRAGQAQTHQVLKVLQSLLESKLVTYDGERFVLTEAGRRQVEALGLDRV AEQRCETCAGRGIVLRPPFDRVLETFQKMVTMRPKATPNFDQGYVTVETTVLRLALMAQRGDLVGRDLLLLGDDDLTAIA AALSGLPRRIFVLDVDERIVGFIRDVARDRGWDNVHAEVYDVQDPLPENLRGQFDVFFTDPVETVRGIFLFLSRCTEALR GPGSAGYFGLSFLEASWKKWRDIQRGILDMGFAITDMLGAFQEYQLENIVAQGYPVARMAPVAVKEPDVSFYVSTVYRLE LTEEPRPLFTGRVELGRDLYYDDEACVTLPR >Mature_350_residues STSGSAVEVRRIDALLLRALYGGSKSYWELMRAGQAQTHQVLKVLQSLLESKLVTYDGERFVLTEAGRRQVEALGLDRVA EQRCETCAGRGIVLRPPFDRVLETFQKMVTMRPKATPNFDQGYVTVETTVLRLALMAQRGDLVGRDLLLLGDDDLTAIAA ALSGLPRRIFVLDVDERIVGFIRDVARDRGWDNVHAEVYDVQDPLPENLRGQFDVFFTDPVETVRGIFLFLSRCTEALRG PGSAGYFGLSFLEASWKKWRDIQRGILDMGFAITDMLGAFQEYQLENIVAQGYPVARMAPVAVKEPDVSFYVSTVYRLEL TEEPRPLFTGRVELGRDLYYDDEACVTLPR
Specific function: Unknown
COG id: COG1568
COG function: function code R; Predicted methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0675 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002723 - InterPro: IPR014435 - InterPro: IPR011991 [H]
Pfam domain/function: PF01861 DUF43 [H]
EC number: NA
Molecular weight: Translated: 39532; Mature: 39401
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSGSAVEVRRIDALLLRALYGGSKSYWELMRAGQAQTHQVLKVLQSLLESKLVTYDGE CCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEECCC RFVLTEAGRRQVEALGLDRVAEQRCETCAGRGIVLRPPFDRVLETFQKMVTMRPKATPNF EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCC DQGYVTVETTVLRLALMAQRGDLVGRDLLLLGDDDLTAIAAALSGLPRRIFVLDVDERIV CCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEECHHHHH GFIRDVARDRGWDNVHAEVYDVQDPLPENLRGQFDVFFTDPVETVRGIFLFLSRCTEALR HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC GPGSAGYFGLSFLEASWKKWRDIQRGILDMGFAITDMLGAFQEYQLENIVAQGYPVARMA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC PVAVKEPDVSFYVSTVYRLELTEEPRPLFTGRVELGRDLYYDDEACVTLPR CCEECCCCCCEEEEEEEEEEECCCCCCCEECHHHHCCCEEECCCCEEECCC >Mature Secondary Structure STSGSAVEVRRIDALLLRALYGGSKSYWELMRAGQAQTHQVLKVLQSLLESKLVTYDGE CCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEECCC RFVLTEAGRRQVEALGLDRVAEQRCETCAGRGIVLRPPFDRVLETFQKMVTMRPKATPNF EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCC DQGYVTVETTVLRLALMAQRGDLVGRDLLLLGDDDLTAIAAALSGLPRRIFVLDVDERIV CCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEECHHHHH GFIRDVARDRGWDNVHAEVYDVQDPLPENLRGQFDVFFTDPVETVRGIFLFLSRCTEALR HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC GPGSAGYFGLSFLEASWKKWRDIQRGILDMGFAITDMLGAFQEYQLENIVAQGYPVARMA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC PVAVKEPDVSFYVSTVYRLELTEEPRPLFTGRVELGRDLYYDDEACVTLPR CCEECCCCCCEEEEEEEEEEECCCCCCCEECHHHHCCCEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]