Click here to switch to the map view.

The map label for this gene is 78044120

Identifier: 78044120

GI number: 78044120

Start: 827516

End: 828112

Strand: Direct

Name: 78044120

Synonym: CHY_0937

Alternate gene names: NA

Gene position: 827516-828112 (Clockwise)

Preceding gene: 78042982

Following gene: 78043699

Centisome position: 34.46

GC content: 45.9

Gene sequence:

>597_bases
ATGGCAGAAATTGCCTATGAACTTGGTAACAGTTTGTATATCAACTTAACTAACCGGTGTACCAATGCCTGTGTATTTTG
CATCCGAAAAACCGAGAAGGGGGTCGGTTACGACCTCTGGTTAGACCGGGAGCCGGATACCGGGGAGATAATCGCTGCCC
TAAAAGAAAAAGATCCGTTAAAATACGAAGAAGTGGTATTCTGTGGTTATGGTGAACCGCTTTTAAGAATAAAAGAGGTG
GTGGAAGTAGCCCGGTGGTTAAAAGAAATTGGGGTCAAAAAAGTTCGTATCAATACCAACGGCCTTGCCAACCGGTATCA
TGGGAGAAATATTTTGCCGGAGCTCAAGGGGCTGGTTGATGTAATCTCCATCAGTTTAAATGCTCAGGATGCCGAAGCTT
ACCAGAAGGTGAGCCGCTCCCGATACGGGCAAGAGGCGTATGCTGAAGTTTTAAAATTTATCGAAGAAAGCAAAAAATAT
ATACCGGAGGTAGTGGTTACGGTGGTCCGCTGGGAAGGAGTTGATGTGGAGGAGACTAAAAAAGTTGCCGAACGCCTGGG
AGTCAAGCTGCGCGTGCGGGAGTTTTATGGAAATTAA

Upstream 100 bases:

>100_bases
GAAAACTGCTTTAAAGTTCATTGTATACCCCCTTTACCATCGTTTCTTCAGTAAAAAATATGAACAAGCTTATTTTTTCA
GAACCGAAGGAGTGAGGAAA

Downstream 100 bases:

>100_bases
AATTAAAAAATTAAAAAGTGCTTGACAAAAACGACAAAATGTAATACTATAAAATCAAAGAAATACCCCCCGGGGGTATA
GGAGGAGAAGATGTACGTTC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Hydrolase TatD Family; TatD Family Hydrolase; Mg-Dependent DNAse; Metallo Cofactor Biosynthesis Protein; Radical SAM-Superfamily Protein; Deoxyribonuclease TatD Family; TatD Family Deoxyribonuclease; Radical SAM Superfamily Protein; Radical SAM Family Protein; Radical SAM; TatD-Related DeoxyribonucleaseRadical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAEIAYELGNSLYINLTNRCTNACVFCIRKTEKGVGYDLWLDREPDTGEIIAALKEKDPLKYEEVVFCGYGEPLLRIKEV
VEVARWLKEIGVKKVRINTNGLANRYHGRNILPELKGLVDVISISLNAQDAEAYQKVSRSRYGQEAYAEVLKFIEESKKY
IPEVVVTVVRWEGVDVEETKKVAERLGVKLRVREFYGN

Sequences:

>Translated_198_residues
MAEIAYELGNSLYINLTNRCTNACVFCIRKTEKGVGYDLWLDREPDTGEIIAALKEKDPLKYEEVVFCGYGEPLLRIKEV
VEVARWLKEIGVKKVRINTNGLANRYHGRNILPELKGLVDVISISLNAQDAEAYQKVSRSRYGQEAYAEVLKFIEESKKY
IPEVVVTVVRWEGVDVEETKKVAERLGVKLRVREFYGN
>Mature_197_residues
AEIAYELGNSLYINLTNRCTNACVFCIRKTEKGVGYDLWLDREPDTGEIIAALKEKDPLKYEEVVFCGYGEPLLRIKEVV
EVARWLKEIGVKKVRINTNGLANRYHGRNILPELKGLVDVISISLNAQDAEAYQKVSRSRYGQEAYAEVLKFIEESKKYI
PEVVVTVVRWEGVDVEETKKVAERLGVKLRVREFYGN

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.21.-

Molecular weight: Translated: 22663; Mature: 22532

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIAYELGNSLYINLTNRCTNACVFCIRKTEKGVGYDLWLDREPDTGEIIAALKEKDPL
CCCHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCC
KYEEVVFCGYGEPLLRIKEVVEVARWLKEIGVKKVRINTNGLANRYHGRNILPELKGLVD
CHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCCHHHHHHHH
VISISLNAQDAEAYQKVSRSRYGQEAYAEVLKFIEESKKYIPEVVVTVVRWEGVDVEETK
HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KVAERLGVKLRVREFYGN
HHHHHHCCEEEEHHHCCC
>Mature Secondary Structure 
AEIAYELGNSLYINLTNRCTNACVFCIRKTEKGVGYDLWLDREPDTGEIIAALKEKDPL
CCHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCC
KYEEVVFCGYGEPLLRIKEVVEVARWLKEIGVKKVRINTNGLANRYHGRNILPELKGLVD
CHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCCHHHHHHHH
VISISLNAQDAEAYQKVSRSRYGQEAYAEVLKFIEESKKYIPEVVVTVVRWEGVDVEETK
HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KVAERLGVKLRVREFYGN
HHHHHHCCEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA