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The map label for this gene is atoS [H]

Identifier: 78042982

GI number: 78042982

Start: 825901

End: 827121

Strand: Direct

Name: atoS [H]

Synonym: CHY_0935

Alternate gene names: 78042982

Gene position: 825901-827121 (Clockwise)

Preceding gene: 78043750

Following gene: 78044120

Centisome position: 34.39

GC content: 34.23

Gene sequence:

>1221_bases
ATGATTTTTTGTGTTTTAATATCGTTTTTCTTTCTTTTAACGTTAATCTTAGTCTTTAATCAAAAAGGTCTTTTTACATT
AAGCATTAAAAATAGCAAAAAAAGTAAAATATTAAAAAAGATTTTGAGTTTTAACCGGCTCACTTACTTGTATTTTACCA
TTCTTGATAATTCTCCCAATATAATTATCGCAATAGATAAAAATAACAAAGTGATATTTTTAAATAGTAGAGCTGAAGAG
GTCTTTGGTATAACAAAAGAAGAAATTTTAGGAAAAAATTATGAAATATTTTTTCAAAAATTCGGGGTTTTGGAGCGCTC
TATTTTAATGGATTCTTTGAAGTACAAAAAGACCTTTGAGGTAGAAAATTATCCGATAGAGGTTAAGAACTGTGTAAAGC
GTTTCTGGGGAAAAAGTTATCCGCTTTTTGGGCCAAAGGGAGAAATTTCCGGAGCAGTTTTGGTACTTTGGGATACCAAA
GATAAACAAATATTAACGCGGGAATTAATTAACCAGGAGAAGTTTTCGGTGGTTAAAACTATTGCTACCGGCACGGCTCA
TGAAATTAGAAACCCTTTAACTACTGTTAAAGGGTTTATCCAGCTTTTAGGCCAGGAAAAATTAAATGACCCGGAGAGTA
AAGTATTTTTAAACACCGTTTTGCAGGAAATTAATCGGATTGAAAAAATTATTTCCGAGTTATTAATTTTGGGAAGCGAT
AAAGGACTTAAAAAAACTTTTTTCAACTTAAATTACCTGATTGAAAAGGTTGTAGAAAATTTTACTCCGACAGCGTATTT
AAACAATATTTCTATTGTAAAAAACCTGGCTAAAGAATTGCCTTTATTTTATGGAGATGAAGAAAGCCTCTATCTTGCCA
TTACGAGTATTTTAAATAATGCCTTTGAAGCCCTGCAAAAAGATGGGGTGATTGTAATTGAAACTTTTTATGAACACGGT
AGTAACGAGATAGGTTTAAGGATTGCGGATAACGGACCGGGAATTCCGGAAGAGCTAAGATCGAAAATTTTTGAACCGTT
CTTTACCACAAAACCGGAAGGCACCGGGCTTGGACTGGCCATTTGTTACCGTACGATTGAAGAACACGGGGGTGAAATTA
GAGTATATAACAACGAAACGGGTGGGGCGACCTTTGAAATTACTCTTCCGTTACCCTTAGAAAATGCTCACACCCAAAAT
TCCGCCAATTGCGCCGGCTAA

Upstream 100 bases:

>100_bases
TTGTGTAGAAATATTTTGATAAATATTCTGGGCGAAGGGAAAGGAATATTAAACAAAGTGGCGAAATTTATAGAATGATG
AACATTAAAGGGGGCAGTTA

Downstream 100 bases:

>100_bases
AAGGATAATTAAGCTTTTTTCTAAAAAGGAAACCCAGGAAAAGGGTGTGTGAAATAATACTGCAGACGCGATTAAAAAAA
TAACGATAAAGATTACTCCG

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MIFCVLISFFFLLTLILVFNQKGLFTLSIKNSKKSKILKKILSFNRLTYLYFTILDNSPNIIIAIDKNNKVIFLNSRAEE
VFGITKEEILGKNYEIFFQKFGVLERSILMDSLKYKKTFEVENYPIEVKNCVKRFWGKSYPLFGPKGEISGAVLVLWDTK
DKQILTRELINQEKFSVVKTIATGTAHEIRNPLTTVKGFIQLLGQEKLNDPESKVFLNTVLQEINRIEKIISELLILGSD
KGLKKTFFNLNYLIEKVVENFTPTAYLNNISIVKNLAKELPLFYGDEESLYLAITSILNNAFEALQKDGVIVIETFYEHG
SNEIGLRIADNGPGIPEELRSKIFEPFFTTKPEGTGLGLAICYRTIEEHGGEIRVYNNETGGATFEITLPLPLENAHTQN
SANCAG

Sequences:

>Translated_406_residues
MIFCVLISFFFLLTLILVFNQKGLFTLSIKNSKKSKILKKILSFNRLTYLYFTILDNSPNIIIAIDKNNKVIFLNSRAEE
VFGITKEEILGKNYEIFFQKFGVLERSILMDSLKYKKTFEVENYPIEVKNCVKRFWGKSYPLFGPKGEISGAVLVLWDTK
DKQILTRELINQEKFSVVKTIATGTAHEIRNPLTTVKGFIQLLGQEKLNDPESKVFLNTVLQEINRIEKIISELLILGSD
KGLKKTFFNLNYLIEKVVENFTPTAYLNNISIVKNLAKELPLFYGDEESLYLAITSILNNAFEALQKDGVIVIETFYEHG
SNEIGLRIADNGPGIPEELRSKIFEPFFTTKPEGTGLGLAICYRTIEEHGGEIRVYNNETGGATFEITLPLPLENAHTQN
SANCAG
>Mature_406_residues
MIFCVLISFFFLLTLILVFNQKGLFTLSIKNSKKSKILKKILSFNRLTYLYFTILDNSPNIIIAIDKNNKVIFLNSRAEE
VFGITKEEILGKNYEIFFQKFGVLERSILMDSLKYKKTFEVENYPIEVKNCVKRFWGKSYPLFGPKGEISGAVLVLWDTK
DKQILTRELINQEKFSVVKTIATGTAHEIRNPLTTVKGFIQLLGQEKLNDPESKVFLNTVLQEINRIEKIISELLILGSD
KGLKKTFFNLNYLIEKVVENFTPTAYLNNISIVKNLAKELPLFYGDEESLYLAITSILNNAFEALQKDGVIVIETFYEHG
SNEIGLRIADNGPGIPEELRSKIFEPFFTTKPEGTGLGLAICYRTIEEHGGEIRVYNNETGGATFEITLPLPLENAHTQN
SANCAG

Specific function: Member of the two-component regulatory system AtoS/AtoC; may activate AtoC by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=376, Percent_Identity=30.5851063829787, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=32.7586206896552, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1790300, Length=352, Percent_Identity=25.2840909090909, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1790346, Length=236, Percent_Identity=27.9661016949153, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786912, Length=231, Percent_Identity=26.4069264069264, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789149, Length=228, Percent_Identity=28.0701754385965, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=27.1551724137931, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789808, Length=227, Percent_Identity=26.431718061674, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788393, Length=218, Percent_Identity=27.0642201834862, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788713, Length=300, Percent_Identity=24, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786600, Length=215, Percent_Identity=23.7209302325581, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI48994928, Length=400, Percent_Identity=24, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87081816, Length=250, Percent_Identity=25.6, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787374, Length=222, Percent_Identity=22.972972972973, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46043; Mature: 46043

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFCVLISFFFLLTLILVFNQKGLFTLSIKNSKKSKILKKILSFNRLTYLYFTILDNSPN
CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEEEECCCCC
IIIAIDKNNKVIFLNSRAEEVFGITKEEILGKNYEIFFQKFGVLERSILMDSLKYKKTFE
EEEEEECCCEEEEEECCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEE
VENYPIEVKNCVKRFWGKSYPLFGPKGEISGAVLVLWDTKDKQILTRELINQEKFSVVKT
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHH
IATGTAHEIRNPLTTVKGFIQLLGQEKLNDPESKVFLNTVLQEINRIEKIISELLILGSD
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KGLKKTFFNLNYLIEKVVENFTPTAYLNNISIVKNLAKELPLFYGDEESLYLAITSILNN
CCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
AFEALQKDGVIVIETFYEHGSNEIGLRIADNGPGIPEELRSKIFEPFFTTKPEGTGLGLA
HHHHHHCCCEEEEEEHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHH
ICYRTIEEHGGEIRVYNNETGGATFEITLPLPLENAHTQNSANCAG
HHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFCVLISFFFLLTLILVFNQKGLFTLSIKNSKKSKILKKILSFNRLTYLYFTILDNSPN
CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEEEECCCCC
IIIAIDKNNKVIFLNSRAEEVFGITKEEILGKNYEIFFQKFGVLERSILMDSLKYKKTFE
EEEEEECCCEEEEEECCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEE
VENYPIEVKNCVKRFWGKSYPLFGPKGEISGAVLVLWDTKDKQILTRELINQEKFSVVKT
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHH
IATGTAHEIRNPLTTVKGFIQLLGQEKLNDPESKVFLNTVLQEINRIEKIISELLILGSD
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KGLKKTFFNLNYLIEKVVENFTPTAYLNNISIVKNLAKELPLFYGDEESLYLAITSILNN
CCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
AFEALQKDGVIVIETFYEHGSNEIGLRIADNGPGIPEELRSKIFEPFFTTKPEGTGLGLA
HHHHHHCCCEEEEEEHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHH
ICYRTIEEHGGEIRVYNNETGGATFEITLPLPLENAHTQNSANCAG
HHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346225; 9097040; 9278503 [H]