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The map label for this gene is 78044055

Identifier: 78044055

GI number: 78044055

Start: 428243

End: 429046

Strand: Direct

Name: 78044055

Synonym: CHY_0493

Alternate gene names: NA

Gene position: 428243-429046 (Clockwise)

Preceding gene: 78044158

Following gene: 78044603

Centisome position: 17.83

GC content: 43.91

Gene sequence:

>804_bases
TTGGCAAAAATAACTTTCGTTTATCCCCATAAAACCAAACCGGTTACCGTTACCGGCCCCCACTGTGCCTTAAACTGTGC
CCACTGTGGGGGCCATTATTTAAAAAGTATGCTGCCGGTTGAAAAGATACCAGATTTACCTGAAGTTAAAAGCCTTTTAA
TTAGCGGAGGCTGTACCAGAGACGGTAAAGTCCCGTGGTTAAAACATGCCGAATTTTTAGCCGAGCAAAAAGGAAACTTG
AAATACAATTTTCATGTGGGATTAATCGATGACGACCGGGAAATTGACCTTTTGGCCCAAATAGCCGATGCGGTGTCCTT
TGATTTTGTGATAGATGACGAAACAATTGCTAAAGTTTATCACTTAAATAAAACCGGGGAAGATTATTTAAACACCTACC
GGAAACTTAAGACGAAAGTTCCGGTGCTGCCGCATATAACTGTTGGCCTTCTCGGTGGAGAAATTAAAGGGGAATTTGAG
GCAATAAAAGCTCTTTTAGAATTTAACCCACCGGCCATTGTGTTTATTATCTTTCGCCCTACGCCTGATACTGACTTTTC
TGACCGTCAGCCGCCGGAAATTGCCAATGTTGTGGAAGTTTTTGAATATACCCGAAAACTTTTTCCGAAAACCCCGTTAT
ATTTAGGTTGCATGCGCCCCGGGGGTAAGTACCGGAAAGAAATTGATTTAAAAGCGTTGGAGCTGGGCTTTGCGCGGATT
GTGCAGCCCCATCCGGAGGTAGTGAAAAAAGCCCGGGAATTGGGATATGAAATTGAGGAAGCGGGAGAGTGCTGCGTGTT
ATGA

Upstream 100 bases:

>100_bases
AAAATCCCGAACTTCTCCATGAAGCTCCCCACGTCACCCCGGTGAAGCGGCTGGATGAGGTGGGTGCAGCGAGAAATCCA
ATTTTGAGGTGGAGTAAAGA

Downstream 100 bases:

>100_bases
GGGCATCGATTGGGACCCTGGCGGCGTTAAAGCTTAAAAAAGTCAAGGTAGAGGCTCTTCCCACTACTGCATATTTTATG
CTCGGTGAAAAGTGCCAGCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Biotin Synthase-Related Protein; Elongator /MiaB/NifB; Biotin Synthase; Radical SAM Superfamily Protein; Biotin Synthase-Related Protein Radical SAM Superfamily; Biotin Synthetase-Like Protein

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAKITFVYPHKTKPVTVTGPHCALNCAHCGGHYLKSMLPVEKIPDLPEVKSLLISGGCTRDGKVPWLKHAEFLAEQKGNL
KYNFHVGLIDDDREIDLLAQIADAVSFDFVIDDETIAKVYHLNKTGEDYLNTYRKLKTKVPVLPHITVGLLGGEIKGEFE
AIKALLEFNPPAIVFIIFRPTPDTDFSDRQPPEIANVVEVFEYTRKLFPKTPLYLGCMRPGGKYRKEIDLKALELGFARI
VQPHPEVVKKARELGYEIEEAGECCVL

Sequences:

>Translated_267_residues
MAKITFVYPHKTKPVTVTGPHCALNCAHCGGHYLKSMLPVEKIPDLPEVKSLLISGGCTRDGKVPWLKHAEFLAEQKGNL
KYNFHVGLIDDDREIDLLAQIADAVSFDFVIDDETIAKVYHLNKTGEDYLNTYRKLKTKVPVLPHITVGLLGGEIKGEFE
AIKALLEFNPPAIVFIIFRPTPDTDFSDRQPPEIANVVEVFEYTRKLFPKTPLYLGCMRPGGKYRKEIDLKALELGFARI
VQPHPEVVKKARELGYEIEEAGECCVL
>Mature_266_residues
AKITFVYPHKTKPVTVTGPHCALNCAHCGGHYLKSMLPVEKIPDLPEVKSLLISGGCTRDGKVPWLKHAEFLAEQKGNLK
YNFHVGLIDDDREIDLLAQIADAVSFDFVIDDETIAKVYHLNKTGEDYLNTYRKLKTKVPVLPHITVGLLGGEIKGEFEA
IKALLEFNPPAIVFIIFRPTPDTDFSDRQPPEIANVVEVFEYTRKLFPKTPLYLGCMRPGGKYRKEIDLKALELGFARIV
QPHPEVVKKARELGYEIEEAGECCVL

Specific function: Unknown

COG id: COG1856

COG function: function code S; Uncharacterized homolog of biotin synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29988; Mature: 29857

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKITFVYPHKTKPVTVTGPHCALNCAHCGGHYLKSMLPVEKIPDLPEVKSLLISGGCTR
CCEEEEEECCCCCCEEEECCCCEEEHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCC
DGKVPWLKHAEFLAEQKGNLKYNFHVGLIDDDREIDLLAQIADAVSFDFVIDDETIAKVY
CCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCHHHHHHE
HLNKTGEDYLNTYRKLKTKVPVLPHITVGLLGGEIKGEFEAIKALLEFNPPAIVFIIFRP
ECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEC
TPDTDFSDRQPPEIANVVEVFEYTRKLFPKTPLYLGCMRPGGKYRKEIDLKALELGFARI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHH
VQPHPEVVKKARELGYEIEEAGECCVL
CCCCHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure 
AKITFVYPHKTKPVTVTGPHCALNCAHCGGHYLKSMLPVEKIPDLPEVKSLLISGGCTR
CEEEEEECCCCCCEEEECCCCEEEHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCC
DGKVPWLKHAEFLAEQKGNLKYNFHVGLIDDDREIDLLAQIADAVSFDFVIDDETIAKVY
CCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCHHHHHHE
HLNKTGEDYLNTYRKLKTKVPVLPHITVGLLGGEIKGEFEAIKALLEFNPPAIVFIIFRP
ECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEC
TPDTDFSDRQPPEIANVVEVFEYTRKLFPKTPLYLGCMRPGGKYRKEIDLKALELGFARI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHH
VQPHPEVVKKARELGYEIEEAGECCVL
CCCCHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA