| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yjeF [C]
Identifier: 78043971
GI number: 78043971
Start: 576662
End: 578236
Strand: Direct
Name: yjeF [C]
Synonym: CHY_0665
Alternate gene names: 78043971
Gene position: 576662-578236 (Clockwise)
Preceding gene: 78044717
Following gene: 78043495
Centisome position: 24.01
GC content: 45.46
Gene sequence:
>1575_bases ATGCTTCTTTTAACCGGGCGGGAGATGGCGGAGTTTGACCAGAAAGCGATTAATGAATACGGGATTCCGGGAATTGTTTT AATGGAAAATGCGGCTTTAAAGACTTTTTATAGAATTAAAGAGATTTTGGGAGATGTTAGCGGCAAAAAAATTATCATCT TAGTGGGAAAGGGAAATAACGGTGGTGATGGTCTGGCCCTTGCCCGGCACCTGGCCAATGCCGGGGCTAAAATCCGGGTG TTTTTACTGTTTAAAGATAATTTTAAAGGAGATGCTTTAATTAATTTTAATATTTTAAAGAAAATGAGTGAAAAAATCTA TGAAGGGATTACCGAAAATTTAAACCTTTTAAAAATCTCCCTGATTGATGCCGATATGGTGGTGGATGCGATATACGGCA CCGGTTTTCGGGGGGCGCTACCGCCGGAAATCCGGGAAGTGGTGGAGATTGTCAACCAGGCGGATGCAGTTAGGCTGGCG GTGGATATCCCTTCGGGGGTAGACGCCAGCACCGGCCAGGTCGAAGGCGTTGCCTTTCAGGCCGACTATACGGTAACCTT CGGGTTACCCAAAGTGGGGCAAATCCTTTTTCCCGGGCGAAAATACTGCGGGGAAATTTACGTGGAGGATATTTCTTTTC CGGAAAAACTAAAAAAAGAGTTTTCTGTTCGGCGCTGGCTTATTGAAGAAAAGCTAATTAAAAAAATCATAAAGCCGGTG GCAGCGGATACCCATAAAGGCCGGCAGGGTTTTACGCTGGTAGCAGGAGGGTCGCGTGCTTACTCTGGAGCTCCTCTTCT TTCTGCAAGAGGATGTTTAGCGTCCGGGGTGGGAGGGGTTTACCTGGCGGTACCGGAAGAGTTATTTGAACCTTTAGCGG GTAAGGTACCGGAAATTATTTTACGGGGAATACCGGCAGCAGCCGGGCAACTGGCGGCGGAAGGTTTTTTTATGCTCAGT GAACTTCTTTCTAAAGTAAAGGCGGCGGTTATAGGACCGGGAATGGGGGAGTTAACCGGAAGTAAAGAAGCTTATCTTAA TTTTTTGGAAAGCTGTCCTTTGCCGCTGGTGATTGATGCCGACGGTTTAAATAATCTTGTTGGTTATCTGGAGGTTTTAA AAAGGCGAACGGCTCCTACGGTTTTAACTCCCCATTTGGGCGAAATGGCAAGGCTTCTTGGGCTGAGTGTTAACGAAGTA AAGGTAAAGGGTGAAGAAATTAGCAAAGAGTTTACAAAAGAATATAATGTTTACCTGGTTTTAAAAAGTGAAACCACTTT AATTGCCGCGCCAACTGGGGAAGTCTGGTACCTGGCCGGGGGCAATCCCCTTTTAGCCAAAGCCGGCAGCGGCGATGTTT TGTCTGGCTTAATTGCCGGTTTTTTAACCCAGGGTTATGGTCCGGAGGAAGCAGCGATTTTGGGGGTTTATTTTCACGGA AGAGCTGGAGAACTGGCATTAAAGGAACGGGCGGTAAACAGCTTTTTTATTTCCGATATTTTTTCTTATTTAAATGAAGT TTTCCGGGAAGTAGGGGGTAATGGTGGAAAGAAAAATATCCATATGGAAAGATAA
Upstream 100 bases:
>100_bases GCAAAAATTTTTCAGGAAAAAGGTTTTACGGGAAAAAGCTTAAGTTTAAGCCATGAAAAAAAGGTAGCGGTAGCAATTTG CGTGATGTGGAGGGATTAAA
Downstream 100 bases:
>100_bases TTTTCCACGATTTATAAAGTTTTGTTTGAACTTATAACAGACTGGAAAGTTTTATTTCCAGTCTGTTATTTTTTTAGGGA ATTTTCGAGGTTTTTTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNNGGDGLALARHLANAGAKIRV FLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKISLIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLA VDIPSGVDASTGQVEGVAFQADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEIILRGIPAAAGQLAAEGFFMLS ELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDADGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEV KVKGEEISKEFTKEYNVYLVLKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER
Sequences:
>Translated_524_residues MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNNGGDGLALARHLANAGAKIRV FLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKISLIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLA VDIPSGVDASTGQVEGVAFQADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEIILRGIPAAAGQLAAEGFFMLS ELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDADGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEV KVKGEEISKEFTKEYNVYLVLKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER >Mature_524_residues MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNNGGDGLALARHLANAGAKIRV FLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKISLIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLA VDIPSGVDASTGQVEGVAFQADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEIILRGIPAAAGQLAAEGFFMLS ELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDADGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEV KVKGEEISKEFTKEYNVYLVLKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI91984773, Length=226, Percent_Identity=26.9911504424779, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790609, Length=496, Percent_Identity=30.8467741935484, Blast_Score=189, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17554656, Length=311, Percent_Identity=25.7234726688103, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI221329809, Length=199, Percent_Identity=26.6331658291457, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 56443; Mature: 56443
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS01050 UPF0031_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNN CEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GGDGLALARHLANAGAKIRVFLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKIS CCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEE LIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLAVDIPSGVDASTGQVEGVAFQ EECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEE ADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV ECEEEEECCCCCCCEECCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEII HCCCCCCCCCEEEEECCCCCCCCCCCHHHCCHHHCCCCCEEEECCHHHHHHHHCCCHHHH LRGIPAAAGQLAAEGFFMLSELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC DGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEVKVKGEEISKEFTKEYNVYLV CCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCHHEEECHHHHHHHHHCCCEEEEE LKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG EECCCEEEEECCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEC RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNN CEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GGDGLALARHLANAGAKIRVFLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKIS CCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEE LIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLAVDIPSGVDASTGQVEGVAFQ EECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEE ADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV ECEEEEECCCCCCCEECCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEII HCCCCCCCCCEEEEECCCCCCCCCCCHHHCCHHHCCCCCEEEECCHHHHHHHHCCCHHHH LRGIPAAAGQLAAEGFFMLSELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC DGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEVKVKGEEISKEFTKEYNVYLV CCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCHHEEECHHHHHHHHHCCCEEEEE LKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG EECCCEEEEECCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEC RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]