| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is yqeG [H]
Identifier: 78043911
GI number: 78043911
Start: 536739
End: 537287
Strand: Direct
Name: yqeG [H]
Synonym: CHY_0622
Alternate gene names: 78043911
Gene position: 536739-537287 (Clockwise)
Preceding gene: 78044523
Following gene: 78043133
Centisome position: 22.35
GC content: 44.26
Gene sequence:
>549_bases ATGTTAAACTATTTTTGGCCGGATTTATATTTAGAAAAGGTTACTGTACTGGATGAAGAGCTCTTAAAAAAATATAATTT AAAAGGAATAATTCTTGACCTTGATAACACCATTTCCCCCTGGGGGGAGAAAACCATTCCCCGGGATGTGGTTAAATGGG TAAAAAAATTGCAAGAGTTTGGGATAAAGTTTTGCCTGGTTTCCAACAACAGCAACGAGCGGGTGCGAGAAGTGGCTGTT TTTCTGGGTATCCCTTATGTAGCCCGGGCCATTAAACCCCGGAGGCGGGCGTTTTTGCAGGGAGTGGAGCTTATGGGGCT TAAGCCGTCGGAAGTGGCGGTGATAGGAGATCAGCTTTTAACCGACATAATTGGAGCCAAAAGAGCGGGGTTAATGGCGA TCCTGGTAACACCTATGGCTTCCCGGGAGTTTATCGGAACGAAAATTAACAGGTTTATCGAAAGTTACCTTTTAAAGCGA CTTTTACAAAAGGGTCTGAAAATATACGGACCTCAGGGGGGATTAAATGGCCATGCGGATAAACGGTGA
Upstream 100 bases:
>100_bases ACCAGAAAAGATATTGCAGCTTTAGGGCACGGAGGCCTTTGCCTTGAGTGTCCGGTTTGCACCTACCCCCATTGTCCCTT TGGAAAATAAAGGAGGCAAT
Downstream 100 bases:
>100_bases AACCAAACTAACGGGGATAATCGGTTATCCTTTAAAACATACCCTTTCCCCTCAGATGCATAATGAAGCTTTTAAAGCCC TAAATTTAAATTTCCTGTAC
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLNYFWPDLYLEKVTVLDEELLKKYNLKGIILDLDNTISPWGEKTIPRDVVKWVKKLQEFGIKFCLVSNNSNERVREVAV FLGIPYVARAIKPRRRAFLQGVELMGLKPSEVAVIGDQLLTDIIGAKRAGLMAILVTPMASREFIGTKINRFIESYLLKR LLQKGLKIYGPQGGLNGHADKR
Sequences:
>Translated_182_residues MLNYFWPDLYLEKVTVLDEELLKKYNLKGIILDLDNTISPWGEKTIPRDVVKWVKKLQEFGIKFCLVSNNSNERVREVAV FLGIPYVARAIKPRRRAFLQGVELMGLKPSEVAVIGDQLLTDIIGAKRAGLMAILVTPMASREFIGTKINRFIESYLLKR LLQKGLKIYGPQGGLNGHADKR >Mature_182_residues MLNYFWPDLYLEKVTVLDEELLKKYNLKGIILDLDNTISPWGEKTIPRDVVKWVKKLQEFGIKFCLVSNNSNERVREVAV FLGIPYVARAIKPRRRAFLQGVELMGLKPSEVAVIGDQLLTDIIGAKRAGLMAILVTPMASREFIGTKINRFIESYLLKR LLQKGLKIYGPQGGLNGHADKR
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006549 - InterPro: IPR010021 [H]
Pfam domain/function: PF09419 DUF2010 [H]
EC number: NA
Molecular weight: Translated: 20686; Mature: 20686
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNYFWPDLYLEKVTVLDEELLKKYNLKGIILDLDNTISPWGEKTIPRDVVKWVKKLQEF CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC GIKFCLVSNNSNERVREVAVFLGIPYVARAIKPRRRAFLQGVELMGLKPSEVAVIGDQLL CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHH TDIIGAKRAGLMAILVTPMASREFIGTKINRFIESYLLKRLLQKGLKIYGPQGGLNGHAD HHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC KR CC >Mature Secondary Structure MLNYFWPDLYLEKVTVLDEELLKKYNLKGIILDLDNTISPWGEKTIPRDVVKWVKKLQEF CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC GIKFCLVSNNSNERVREVAVFLGIPYVARAIKPRRRAFLQGVELMGLKPSEVAVIGDQLL CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHH TDIIGAKRAGLMAILVTPMASREFIGTKINRFIESYLLKRLLQKGLKIYGPQGGLNGHAD HHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC KR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]