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The map label for this gene is ydjZ [H]

Identifier: 78043741

GI number: 78043741

Start: 1433728

End: 1434387

Strand: Direct

Name: ydjZ [H]

Synonym: CHY_1595

Alternate gene names: 78043741

Gene position: 1433728-1434387 (Clockwise)

Preceding gene: 78044531

Following gene: 78043319

Centisome position: 59.7

GC content: 37.88

Gene sequence:

>660_bases
ATGCAAAAAAAGTGGTTGTATTCTACTGCAATCCTACTAATACTATTTTTAATTCTTTTTATTGCTGTGGCATTTAATTT
GGGTCATTTTTTTCGACAATTTTCTTCTCCTGCCGAACTTGCTCGCTATTTACGTTCTTTCGGTCTTTTAACAGTATTTA
TTAGCATTTTACTCCTCATAATTCAAACCTTGTTTACGCCAGTACCGTTATTTATCTTAGTGGCTGCCAACGGGTTTATT
TTCGGTGTTTTGGGTGGAATAATAATTTCACTATCTGGGAGCGTTCTGGGTGCAACCATTGCCTTTTTAGCAGCCAGATT
TTTAGGAAGAAATTTTCTAAGCCGTTTTTTAAAACCAGAATATTTAGACAAAGTCCACTCATTTAGCTGCAAGGATGGCC
CTAAAGTTGTATTTTTTGCGCGGTTAATTCCCGTATTACCATCAAGTATCGTAAGCTACTTAGCAGGACTTAGCAACATG
CGATTTACCCCATACTTTTTGGCCACTACTTTAGGAAAACTCCCGGAAATTGTAGTGTATTCCCTTCTCGGTCACGGTTT
TGGTCATTTAGACAATCTGCCAGCTCAACTTTTTCTGGCAATCCTCATAACACTTATCGCCTACTTTTTTTACCGCTGGC
ACAAGAAAACCGGTATTTAA

Upstream 100 bases:

>100_bases
ACAGATAAAGTATGCTTCATATTATGCCCTCCCCAATCTTTTCATTTTAAAAGTTCTTTGCTAAAATTTTGCTTGAAGTT
TTAATATGGAGAAGAGTAAA

Downstream 100 bases:

>100_bases
CAATATTTAAAAAAAAATCGCTCACACGAGCGATTTTTTTATGATTGTGCTTGTTCTGCCACTACTTTATTTAAATCAGC
AATTAACTCATCAATATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MQKKWLYSTAILLILFLILFIAVAFNLGHFFRQFSSPAELARYLRSFGLLTVFISILLLIIQTLFTPVPLFILVAANGFI
FGVLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLKPEYLDKVHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNM
RFTPYFLATTLGKLPEIVVYSLLGHGFGHLDNLPAQLFLAILITLIAYFFYRWHKKTGI

Sequences:

>Translated_219_residues
MQKKWLYSTAILLILFLILFIAVAFNLGHFFRQFSSPAELARYLRSFGLLTVFISILLLIIQTLFTPVPLFILVAANGFI
FGVLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLKPEYLDKVHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNM
RFTPYFLATTLGKLPEIVVYSLLGHGFGHLDNLPAQLFLAILITLIAYFFYRWHKKTGI
>Mature_219_residues
MQKKWLYSTAILLILFLILFIAVAFNLGHFFRQFSSPAELARYLRSFGLLTVFISILLLIIQTLFTPVPLFILVAANGFI
FGVLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLKPEYLDKVHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNM
RFTPYFLATTLGKLPEIVVYSLLGHGFGHLDNLPAQLFLAILITLIAYFFYRWHKKTGI

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=191, Percent_Identity=32.4607329842932, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87081964, Length=189, Percent_Identity=31.7460317460317, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24490; Mature: 24490

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKWLYSTAILLILFLILFIAVAFNLGHFFRQFSSPAELARYLRSFGLLTVFISILLLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IQTLFTPVPLFILVAANGFIFGVLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLKPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
YLDKVHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNMRFTPYFLATTLGKLPEIVVY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SLLGHGFGHLDNLPAQLFLAILITLIAYFFYRWHKKTGI
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKKWLYSTAILLILFLILFIAVAFNLGHFFRQFSSPAELARYLRSFGLLTVFISILLLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IQTLFTPVPLFILVAANGFIFGVLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLKPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
YLDKVHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNMRFTPYFLATTLGKLPEIVVY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SLLGHGFGHLDNLPAQLFLAILITLIAYFFYRWHKKTGI
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]