Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78043319

Identifier: 78043319

GI number: 78043319

Start: 1474542

End: 1475108

Strand: Direct

Name: 78043319

Synonym: CHY_1640

Alternate gene names: NA

Gene position: 1474542-1475108 (Clockwise)

Preceding gene: 78043741

Following gene: 78044474

Centisome position: 61.4

GC content: 30.16

Gene sequence:

>567_bases
ATGAAATATCTCATCTTAATAATTTTGTGGCTTTTATTTTGCTTTCTTCATAGCTTTTTAATTCATCCTCCGGTGGAAAA
TTTTTTAAAAGATAAATTTTTCCCTAAAAGCTACCGGATTTTTTATAATTTAATTTCCTTATTTAGTTTTACCGGTGCAT
ATTTATATTTAAAAATTAACTTTTCCGAACCCAAACTTATAATCATACCCCTTTGGCTAAGTACTATTTTTATAATAACC
GGAATTTTGCTTATCCTTTGGAGTTTTTCCTGCTATAACCTCAAAGAATTTTTAGGTTTGGCTGCGCAAAATACCAAAAA
CCTTGTTAAAAAAGGGCCTCTAAAATATCTTCGCCACCCTTTATACTTAGCAGCTCTCCTTTTAATCTGGAGTGAAAGCT
TTAATTTACCAAGACTTCTGGTAAATATAATTTTAAGCGGATATATCTTTATTGGTATTAAATTAGAAGAAAAAAAGTTA
ATTAATATTTTTGGCAAGGAATACGAAAGCTACAAAAAAGAGGTACCGGCTTTATTTCCGCTACCCCACCGTATTTTTCG
TGAATAA

Upstream 100 bases:

>100_bases
GAAAAATCTTCTGCCATGGAAAACCGTCCGCACATAATATCACCTTGACAAAATTACATAATGTAAGATAATTAAAAAAA
ATCTAAAAAGGAGTAACAGC

Downstream 100 bases:

>100_bases
TTTTCCCTTTCTTTAAACTTTTTTGGGTCGACCCCGTTTTCTTGCTCCTTTTTCTTCAGGAGCTTTTTTAATTTTATTTT
CCATTAACTCCAAAGTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKINFSEPKLIIIPLWLSTIFIIT
GILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHPLYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKL
INIFGKEYESYKKEVPALFPLPHRIFRE

Sequences:

>Translated_188_residues
MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKINFSEPKLIIIPLWLSTIFIIT
GILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHPLYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKL
INIFGKEYESYKKEVPALFPLPHRIFRE
>Mature_188_residues
MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKINFSEPKLIIIPLWLSTIFIIT
GILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHPLYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKL
INIFGKEYESYKKEVPALFPLPHRIFRE

Specific function: Unknown

COG id: COG2020

COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22257; Mature: 22257

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKIN
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEE
FSEPKLIIIPLWLSTIFIITGILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHP
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKLINIFGKEYESYKKEVPALFP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHCCCCCC
LPHRIFRE
CCHHHHCC
>Mature Secondary Structure
MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKIN
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEE
FSEPKLIIIPLWLSTIFIITGILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHP
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKLINIFGKEYESYKKEVPALFP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHCCCCCC
LPHRIFRE
CCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA