| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043319
Identifier: 78043319
GI number: 78043319
Start: 1474542
End: 1475108
Strand: Direct
Name: 78043319
Synonym: CHY_1640
Alternate gene names: NA
Gene position: 1474542-1475108 (Clockwise)
Preceding gene: 78043741
Following gene: 78044474
Centisome position: 61.4
GC content: 30.16
Gene sequence:
>567_bases ATGAAATATCTCATCTTAATAATTTTGTGGCTTTTATTTTGCTTTCTTCATAGCTTTTTAATTCATCCTCCGGTGGAAAA TTTTTTAAAAGATAAATTTTTCCCTAAAAGCTACCGGATTTTTTATAATTTAATTTCCTTATTTAGTTTTACCGGTGCAT ATTTATATTTAAAAATTAACTTTTCCGAACCCAAACTTATAATCATACCCCTTTGGCTAAGTACTATTTTTATAATAACC GGAATTTTGCTTATCCTTTGGAGTTTTTCCTGCTATAACCTCAAAGAATTTTTAGGTTTGGCTGCGCAAAATACCAAAAA CCTTGTTAAAAAAGGGCCTCTAAAATATCTTCGCCACCCTTTATACTTAGCAGCTCTCCTTTTAATCTGGAGTGAAAGCT TTAATTTACCAAGACTTCTGGTAAATATAATTTTAAGCGGATATATCTTTATTGGTATTAAATTAGAAGAAAAAAAGTTA ATTAATATTTTTGGCAAGGAATACGAAAGCTACAAAAAAGAGGTACCGGCTTTATTTCCGCTACCCCACCGTATTTTTCG TGAATAA
Upstream 100 bases:
>100_bases GAAAAATCTTCTGCCATGGAAAACCGTCCGCACATAATATCACCTTGACAAAATTACATAATGTAAGATAATTAAAAAAA ATCTAAAAAGGAGTAACAGC
Downstream 100 bases:
>100_bases TTTTCCCTTTCTTTAAACTTTTTTGGGTCGACCCCGTTTTCTTGCTCCTTTTTCTTCAGGAGCTTTTTTAATTTTATTTT CCATTAACTCCAAAGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKINFSEPKLIIIPLWLSTIFIIT GILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHPLYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKL INIFGKEYESYKKEVPALFPLPHRIFRE
Sequences:
>Translated_188_residues MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKINFSEPKLIIIPLWLSTIFIIT GILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHPLYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKL INIFGKEYESYKKEVPALFPLPHRIFRE >Mature_188_residues MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKINFSEPKLIIIPLWLSTIFIIT GILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHPLYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKL INIFGKEYESYKKEVPALFPLPHRIFRE
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22257; Mature: 22257
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKIN CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEE FSEPKLIIIPLWLSTIFIITGILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHP CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH LYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKLINIFGKEYESYKKEVPALFP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHCCCCCC LPHRIFRE CCHHHHCC >Mature Secondary Structure MKYLILIILWLLFCFLHSFLIHPPVENFLKDKFFPKSYRIFYNLISLFSFTGAYLYLKIN CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEE FSEPKLIIIPLWLSTIFIITGILLILWSFSCYNLKEFLGLAAQNTKNLVKKGPLKYLRHP CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH LYLAALLLIWSESFNLPRLLVNIILSGYIFIGIKLEEKKLINIFGKEYESYKKEVPALFP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHCCCCCC LPHRIFRE CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA