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The map label for this gene is 78043713

Identifier: 78043713

GI number: 78043713

Start: 310742

End: 312607

Strand: Direct

Name: 78043713

Synonym: CHY_0362

Alternate gene names: NA

Gene position: 310742-312607 (Clockwise)

Preceding gene: 78044389

Following gene: 78042957

Centisome position: 12.94

GC content: 45.87

Gene sequence:

>1866_bases
GTGAATTTTGCTAAACTTTTAGCTTTAGTCCAGAAACCGGCGAGATATTTGGGCAATGAATTAAATGCGGTAAAAAAGCC
CTGGGAGAAAAATTTGGTTAAAATTGCCTTTTGTTTTCCGGATTTATATGAAGTTGGGATGTCCCATTTAGGACTTAGAA
TTTTATACGAAACGGTAAATCGCCGGGATGATGCCCTTTTGGAGAGGGTATTTGCTCCTGCCGAAGACATGGAAAAGCTT
TTGCGGGAAAAGGGTTATTTTCTTTTTTCTCTGGAAAATAAAAAGCCTCTTTGGGAGTTTGACCTGGTAGGGTTTACCCT
GCAATACGAGCTAAGCTATTCCAATATTTTAAATATGTTAGAATTGGGTGGAGTGGAAATATTTGCCGAAAAGAGAAGGG
GATGGCCCCTTGTTATGGCCGGAGGACCGGGGGCTTTTAACCCGGAGCCTTTAGCCGATTTTATTGATTTTTTTGTTTTG
GGAGAAGGGGAAGAGGTAGTAGCGGAAATTATCGAAGTGGTAAAGGAAGCCAAAGTTAAAGGCTGGGAGCGTAACGATAC
CCTTTTGGCTTTAGCGCAAATTCCGGGGGTTTACGTTCCGAAATTTTACCGGGTTAGTTATGATGAAGCCGGAAGGTTGA
CCGAGTTTATGCCGCTTAAAAAAGATCTTCCGGTGAAATTTACCAAAAGAATTGCTCAAGGCTTTTTATCCGGATACTCC
CTGCCATCTCCCATAGTACCTTATCTTGATATTGTTCATAATCGGGCCATGGTGGAAATAATGCGGGGATGCAGCCGGGG
TTGCCGTTTTTGCCAGGCGGGGATGATTTACCGCCCGGTACGGGAAAAAACTCCGGAATTGGTTTTGGCAGAAGCAGAAA
AAATTATGGAGAAAACCGGCTATGAAGAAATATCCTTGGCTTCCTTGAGCTCCGGAGATTACCCGTATATTCGGGAGGTA
GCGAAAAAGCTTTTGGATAAGTACCAGGAAGCGGGGGTAAATATTAGCCTTCCTTCCCTGCGAATTGATACCTTTGCAGT
AGATTTGGCGTCCGAACTGCAGCGGGTGCGGAAAGCTACCTTGACTTTTGCTCCGGAAGCCGGAACCCAGAGGATGCGGG
ATATTATTAATAAAGGGGTTACCGAGGAAGACCTCATTAATACTGTGAAAGCTGCTTTTAAAGCAGGCTGGCAGGCAATT
AAACTTTACTTTATGATTGGCCTGCCTTATGAAACCGACGAAGACGTTGCGGGGATTATTCATTTAGCCCAGAAAGTTGC
CGATATCGGCGTTAAAGAAGGGAGGGTACCCCGAGGACGGCTGAAAGTTACGGTTTCGGTTTCAAACTTTGTTCCCAAAC
CCCATACTCCCTTTCAGTGGCTGGGGATTATTTCAGCGGAAGAAATTAAAAGGCGGCAGGGAATATTGGAAAAATTGGCT
AAAAAAGACCGGCGTCTTAGTTTAAAAATGCACGATTACCGGACGAGCCTTTTGGAGGCAGCCCTTTCCAGGGCGGACCG
GCGTATTGGGCGGGTAATTTACCGGGCGCATAAATTAGGCGCCAAGTTTGACGGCTGGCAGGAATATTTTAATTATGAGC
TGTGGCAAAAAGCTTTTTTAGAAGAAGGATTTGACCTTGAAGCGTATGCCCGGAGGAGCTTTTCTTTGGATGACCGTTTG
CCCTGGGAACCATTTGCCGGGGGAATAAGTCAGAGGTTTCTTAAGAAGGAGTATCGGGACGCCATGGCTGGAAAGAACAC
CGCTGATTGCCGGGAGGGTAAGTGTACCGGATGTGGGGTTTGCCCTGCTTTGGAAATTTCCCCGGTGCTGACAGGAGGGC
GGAAGGTTAGTGAAATATTTGCTTAA

Upstream 100 bases:

>100_bases
GTTAAAACCGGTGGGAGAGCTTTTACAAAAATGAGAAGCTTTCCTGCTTATTTTTTTCTTACGGGAAATTTTGTGGTAAA
ATAGCAATGAGGTGAAAAAG

Downstream 100 bases:

>100_bases
GTATTCCCGGGGAGGAGAATTAAAATACATATCGCACCTGGATACCATGCGGGTTTTTGAAAGGGCTTTTCGCAGGGCGA
ATTTGCCGATGGCTTTTTCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MNFAKLLALVQKPARYLGNELNAVKKPWEKNLVKIAFCFPDLYEVGMSHLGLRILYETVNRRDDALLERVFAPAEDMEKL
LREKGYFLFSLENKKPLWEFDLVGFTLQYELSYSNILNMLELGGVEIFAEKRRGWPLVMAGGPGAFNPEPLADFIDFFVL
GEGEEVVAEIIEVVKEAKVKGWERNDTLLALAQIPGVYVPKFYRVSYDEAGRLTEFMPLKKDLPVKFTKRIAQGFLSGYS
LPSPIVPYLDIVHNRAMVEIMRGCSRGCRFCQAGMIYRPVREKTPELVLAEAEKIMEKTGYEEISLASLSSGDYPYIREV
AKKLLDKYQEAGVNISLPSLRIDTFAVDLASELQRVRKATLTFAPEAGTQRMRDIINKGVTEEDLINTVKAAFKAGWQAI
KLYFMIGLPYETDEDVAGIIHLAQKVADIGVKEGRVPRGRLKVTVSVSNFVPKPHTPFQWLGIISAEEIKRRQGILEKLA
KKDRRLSLKMHDYRTSLLEAALSRADRRIGRVIYRAHKLGAKFDGWQEYFNYELWQKAFLEEGFDLEAYARRSFSLDDRL
PWEPFAGGISQRFLKKEYRDAMAGKNTADCREGKCTGCGVCPALEISPVLTGGRKVSEIFA

Sequences:

>Translated_621_residues
MNFAKLLALVQKPARYLGNELNAVKKPWEKNLVKIAFCFPDLYEVGMSHLGLRILYETVNRRDDALLERVFAPAEDMEKL
LREKGYFLFSLENKKPLWEFDLVGFTLQYELSYSNILNMLELGGVEIFAEKRRGWPLVMAGGPGAFNPEPLADFIDFFVL
GEGEEVVAEIIEVVKEAKVKGWERNDTLLALAQIPGVYVPKFYRVSYDEAGRLTEFMPLKKDLPVKFTKRIAQGFLSGYS
LPSPIVPYLDIVHNRAMVEIMRGCSRGCRFCQAGMIYRPVREKTPELVLAEAEKIMEKTGYEEISLASLSSGDYPYIREV
AKKLLDKYQEAGVNISLPSLRIDTFAVDLASELQRVRKATLTFAPEAGTQRMRDIINKGVTEEDLINTVKAAFKAGWQAI
KLYFMIGLPYETDEDVAGIIHLAQKVADIGVKEGRVPRGRLKVTVSVSNFVPKPHTPFQWLGIISAEEIKRRQGILEKLA
KKDRRLSLKMHDYRTSLLEAALSRADRRIGRVIYRAHKLGAKFDGWQEYFNYELWQKAFLEEGFDLEAYARRSFSLDDRL
PWEPFAGGISQRFLKKEYRDAMAGKNTADCREGKCTGCGVCPALEISPVLTGGRKVSEIFA
>Mature_621_residues
MNFAKLLALVQKPARYLGNELNAVKKPWEKNLVKIAFCFPDLYEVGMSHLGLRILYETVNRRDDALLERVFAPAEDMEKL
LREKGYFLFSLENKKPLWEFDLVGFTLQYELSYSNILNMLELGGVEIFAEKRRGWPLVMAGGPGAFNPEPLADFIDFFVL
GEGEEVVAEIIEVVKEAKVKGWERNDTLLALAQIPGVYVPKFYRVSYDEAGRLTEFMPLKKDLPVKFTKRIAQGFLSGYS
LPSPIVPYLDIVHNRAMVEIMRGCSRGCRFCQAGMIYRPVREKTPELVLAEAEKIMEKTGYEEISLASLSSGDYPYIREV
AKKLLDKYQEAGVNISLPSLRIDTFAVDLASELQRVRKATLTFAPEAGTQRMRDIINKGVTEEDLINTVKAAFKAGWQAI
KLYFMIGLPYETDEDVAGIIHLAQKVADIGVKEGRVPRGRLKVTVSVSNFVPKPHTPFQWLGIISAEEIKRRQGILEKLA
KKDRRLSLKMHDYRTSLLEAALSRADRRIGRVIYRAHKLGAKFDGWQEYFNYELWQKAFLEEGFDLEAYARRSFSLDDRL
PWEPFAGGISQRFLKKEYRDAMAGKNTADCREGKCTGCGVCPALEISPVLTGGRKVSEIFA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 70500; Mature: 70500

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFAKLLALVQKPARYLGNELNAVKKPWEKNLVKIAFCFPDLYEVGMSHLGLRILYETVN
CCHHHHHHHHHHHHHHHCHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHC
RRDDALLERVFAPAEDMEKLLREKGYFLFSLENKKPLWEFDLVGFTLQYELSYSNILNML
CHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEEEEECHHHHHHHH
ELGGVEIFAEKRRGWPLVMAGGPGAFNPEPLADFIDFFVLGEGEEVVAEIIEVVKEAKVK
HHCCHHEEEHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GWERNDTLLALAQIPGVYVPKFYRVSYDEAGRLTEFMPLKKDLPVKFTKRIAQGFLSGYS
CCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCC
LPSPIVPYLDIVHNRAMVEIMRGCSRGCRFCQAGMIYRPVREKTPELVLAEAEKIMEKTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCC
YEEISLASLSSGDYPYIREVAKKLLDKYQEAGVNISLPSLRIDTFAVDLASELQRVRKAT
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEHHHHHHHHHHHHHHHHHHH
LTFAPEAGTQRMRDIINKGVTEEDLINTVKAAFKAGWQAIKLYFMIGLPYETDEDVAGII
HEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEHEEECCCCCCHHHHHHH
HLAQKVADIGVKEGRVPRGRLKVTVSVSNFVPKPHTPFQWLGIISAEEIKRRQGILEKLA
HHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
KKDRRLSLKMHDYRTSLLEAALSRADRRIGRVIYRAHKLGAKFDGWQEYFNYELWQKAFL
HHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EEGFDLEAYARRSFSLDDRLPWEPFAGGISQRFLKKEYRDAMAGKNTADCREGKCTGCGV
HCCCCHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
CPALEISPVLTGGRKVSEIFA
CCCCCCCHHHCCCCHHHHHCC
>Mature Secondary Structure
MNFAKLLALVQKPARYLGNELNAVKKPWEKNLVKIAFCFPDLYEVGMSHLGLRILYETVN
CCHHHHHHHHHHHHHHHCHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHC
RRDDALLERVFAPAEDMEKLLREKGYFLFSLENKKPLWEFDLVGFTLQYELSYSNILNML
CHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEEEEECHHHHHHHH
ELGGVEIFAEKRRGWPLVMAGGPGAFNPEPLADFIDFFVLGEGEEVVAEIIEVVKEAKVK
HHCCHHEEEHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GWERNDTLLALAQIPGVYVPKFYRVSYDEAGRLTEFMPLKKDLPVKFTKRIAQGFLSGYS
CCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCC
LPSPIVPYLDIVHNRAMVEIMRGCSRGCRFCQAGMIYRPVREKTPELVLAEAEKIMEKTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCC
YEEISLASLSSGDYPYIREVAKKLLDKYQEAGVNISLPSLRIDTFAVDLASELQRVRKAT
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEHHHHHHHHHHHHHHHHHHH
LTFAPEAGTQRMRDIINKGVTEEDLINTVKAAFKAGWQAIKLYFMIGLPYETDEDVAGII
HEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEHEEECCCCCCHHHHHHH
HLAQKVADIGVKEGRVPRGRLKVTVSVSNFVPKPHTPFQWLGIISAEEIKRRQGILEKLA
HHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
KKDRRLSLKMHDYRTSLLEAALSRADRRIGRVIYRAHKLGAKFDGWQEYFNYELWQKAFL
HHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EEGFDLEAYARRSFSLDDRLPWEPFAGGISQRFLKKEYRDAMAGKNTADCREGKCTGCGV
HCCCCHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
CPALEISPVLTGGRKVSEIFA
CCCCCCCHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]