Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044389

Identifier: 78044389

GI number: 78044389

Start: 309827

End: 310675

Strand: Direct

Name: 78044389

Synonym: CHY_0361

Alternate gene names: NA

Gene position: 309827-310675 (Clockwise)

Preceding gene: 78044701

Following gene: 78043713

Centisome position: 12.9

GC content: 39.1

Gene sequence:

>849_bases
ATGAAATTAAAAGTTCACCCGCTGTTCTGGGTTTTTCTCTTAATGTATCTGGCTTTAGGAGCATTTGCCAAAATTGGCAT
ACTTTTATTTTCACTCTTGTTTCACGAACTATTTCACCTTTTTCTGTATAAAAAACTTTTTCAGAAACCTGTTTCTTTGA
CCCTGTTACCCTTTGGAGGGGTAATAGAAACTTCCAATCCGGTAGAATTCTTTCCGGGAAAGGAGTTTTTGGTTGCGGCG
GTGGGGCCGCTGGCTAATTTAATTTTGATGTTTTTTGCTTTAGGGATAATCAATAATGGCTTTTTTAACGCAAATGTAGC
TTTTTTATTGGATTTTAACTTTATCATGGCGGTTTTTAATTTTTTGCCGGTTCTTCCCCTGGACGGGGGACGAATGTTGC
GGGCGGTTTTAACCAGGGTTACTAATTTAAGAATAGCTACCCGGATTGTTTCCAATATTTCGCTGGTAACCGCTTTTGCG
GTGGTGGCGGCGGGAATTTACGGCTTTTTATTCCGGATAAATGGTGCCGATGTGGTAATTTTGGGAGTGTTATTGATTTT
TTTAGCCTTTCGGGAAAGGGTAAAAAACAGCTTTTACTTTTTGCAAAACCTAACTTATAAGGAAAAAATTTTAAATGAGC
AGAAAATTTTAAATTCCAAGGTTTTGACGGTAGCCCGAAATACTCCACTAAAAGAGGTGGTAGACAAATTCTTACCGTCC
CATTACCAGTATGTGGTGGTGTTGGAACGGAACCAGGAAATCTTAGGAGTTTTAAGCGAATGGCAAATAATGGAGGGAGT
TGTGAAGTTTGGCCTGTTAAAACCGGTGGGAGAGCTTTTACAAAAATGA

Upstream 100 bases:

>100_bases
GGAGATAGGTTGTACCGGGAACAGCGGGATGCTGCATGTGGAATTTCACGATAAGGGTCTTGCCGTTGATCCGGCACCGG
TCTTTAAGGTAAAGAGCTAA

Downstream 100 bases:

>100_bases
GAAGCTTTCCTGCTTATTTTTTTCTTACGGGAAATTTTGTGGTAAAATAGCAATGAGGTGAAAAAGGTGAATTTTGCTAA
ACTTTTAGCTTTAGTCCAGA

Product: putative membrane-associated zinc metalloprotease

Products: NA

Alternate protein names: Peptidase; Protease; Metalloprotease; M50 Family Membrane Endopeptidase; Membrane-Associated Zinc Metalloprotease; Zn-Dependent Protease; M50 Family Metallopeptidase; Zinc Metalloprotease Sll; Peptidase Family M; Stage IV Sporulation Protein FB; Sporulation Protein IVFB Related Protein; Stage IV Sporulation Protein FB Metalloprotease; Sporulation Protein IVFB Related Protein Metallopeptidase

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKLKVHPLFWVFLLMYLALGAFAKIGILLFSLLFHELFHLFLYKKLFQKPVSLTLLPFGGVIETSNPVEFFPGKEFLVAA
VGPLANLILMFFALGIINNGFFNANVAFLLDFNFIMAVFNFLPVLPLDGGRMLRAVLTRVTNLRIATRIVSNISLVTAFA
VVAAGIYGFLFRINGADVVILGVLLIFLAFRERVKNSFYFLQNLTYKEKILNEQKILNSKVLTVARNTPLKEVVDKFLPS
HYQYVVVLERNQEILGVLSEWQIMEGVVKFGLLKPVGELLQK

Sequences:

>Translated_282_residues
MKLKVHPLFWVFLLMYLALGAFAKIGILLFSLLFHELFHLFLYKKLFQKPVSLTLLPFGGVIETSNPVEFFPGKEFLVAA
VGPLANLILMFFALGIINNGFFNANVAFLLDFNFIMAVFNFLPVLPLDGGRMLRAVLTRVTNLRIATRIVSNISLVTAFA
VVAAGIYGFLFRINGADVVILGVLLIFLAFRERVKNSFYFLQNLTYKEKILNEQKILNSKVLTVARNTPLKEVVDKFLPS
HYQYVVVLERNQEILGVLSEWQIMEGVVKFGLLKPVGELLQK
>Mature_282_residues
MKLKVHPLFWVFLLMYLALGAFAKIGILLFSLLFHELFHLFLYKKLFQKPVSLTLLPFGGVIETSNPVEFFPGKEFLVAA
VGPLANLILMFFALGIINNGFFNANVAFLLDFNFIMAVFNFLPVLPLDGGRMLRAVLTRVTNLRIATRIVSNISLVTAFA
VVAAGIYGFLFRINGADVVILGVLLIFLAFRERVKNSFYFLQNLTYKEKILNEQKILNSKVLTVARNTPLKEVVDKFLPS
HYQYVVVLERNQEILGVLSEWQIMEGVVKFGLLKPVGELLQK

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31908; Mature: 31908

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKVHPLFWVFLLMYLALGAFAKIGILLFSLLFHELFHLFLYKKLFQKPVSLTLLPFGG
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
VIETSNPVEFFPGKEFLVAAVGPLANLILMFFALGIINNGFFNANVAFLLDFNFIMAVFN
EEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHH
FLPVLPLDGGRMLRAVLTRVTNLRIATRIVSNISLVTAFAVVAAGIYGFLFRINGADVVI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH
LGVLLIFLAFRERVKNSFYFLQNLTYKEKILNEQKILNSKVLTVARNTPLKEVVDKFLPS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
HYQYVVVLERNQEILGVLSEWQIMEGVVKFGLLKPVGELLQK
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLKVHPLFWVFLLMYLALGAFAKIGILLFSLLFHELFHLFLYKKLFQKPVSLTLLPFGG
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
VIETSNPVEFFPGKEFLVAAVGPLANLILMFFALGIINNGFFNANVAFLLDFNFIMAVFN
EEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHH
FLPVLPLDGGRMLRAVLTRVTNLRIATRIVSNISLVTAFAVVAAGIYGFLFRINGADVVI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH
LGVLLIFLAFRERVKNSFYFLQNLTYKEKILNEQKILNSKVLTVARNTPLKEVVDKFLPS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
HYQYVVVLERNQEILGVLSEWQIMEGVVKFGLLKPVGELLQK
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA