| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is glnH [H]
Identifier: 78043559
GI number: 78043559
Start: 437331
End: 438149
Strand: Direct
Name: glnH [H]
Synonym: CHY_0504
Alternate gene names: 78043559
Gene position: 437331-438149 (Clockwise)
Preceding gene: 78044334
Following gene: 78044176
Centisome position: 18.21
GC content: 41.15
Gene sequence:
>819_bases ATGAAAAAATTTGGAGCTTTGTTCTTGGTTGTCGTTTTAACCTTGGGGCTTATCCTGACAGCCTGTGGCAATAAGCAGGC GGAGCAAACAAACAGCGCCCAAAACCAGGAGCAGAAGCAGGAGCAAAAACAAAAAATTGTAGTGGCTTCCGATACTTCTT ACGCTCCTTTTGAATTTCAGGATCCTTCTACCGGAAAATATGTAGGTTTTGATATGGACTTAATTCAGGCAATTGGCGAA GCGGTTGGCTTTGAAGTGGAAATTAAAAGTATGAACTTTGATGGAGTTTTAACTTCGGTGCAAAGTGGTACGGTTGATGC GGCTATTTCCGCCATTTCGATTACCGATAAGCGCAAAGAAGTCATGAATTTTAGCGAACCGTATTACGATTCGGGTTTGG CCATTGTGGTAAAAGGTGACAACAACACCATTAAAGGTATTGATGATTTAAAAGGGAAAAGGGTAGCGGTGCAAATTGCC ACTACCGGTGCCGATTATGCCAACGAGTTAAAAGCTAAAGGAATTGTGAAAGAGGTAAAAACCTTTAATACTCTTCCCGA TGCTTTAATGGAACTTAGAAACAACGGTGTTGATGCGGTAATTAACGACTGGCCGGTTAATGCCTACTATATTAAGCAAA GCTTTTCCGATTTAAAAATGGTGGGGGATAAGTTAACCGGAGAATCGTATGGTATCGCTGTGCCCAAGTCCAAGCCGGAA ATTTTAGCCAAAATTAACGAAGGCTTAAAGAAAGTGAAAGAATCGGGTAAGTACGCCGAAATTTACGAAAAGTGGTTTGG AGAAAAACCAAAGAACTAA
Upstream 100 bases:
>100_bases TCAGAAAATTTTAACATTGACTAATTGTACTAAACAATTTATAATTATTCAAAGGTTGATTCTTTAATATACTAAAGGGT ATTAAAGGAGGAATTTTTTA
Downstream 100 bases:
>100_bases TTGAGGTGGCTTAAGTGGAACTAAAATGGTCGGTAGTAATTGAATCTTTACCTTTATTAGCAGAAGGTGCTTTAGTAACG CTTAAAATAACGGTTATTGC
Product: glutamine ABC transporter glutamine-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQDPSTGKYVGFDMDLIQAIGE AVGFEVEIKSMNFDGVLTSVQSGTVDAAISAISITDKRKEVMNFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIA TTGADYANELKAKGIVKEVKTFNTLPDALMELRNNGVDAVINDWPVNAYYIKQSFSDLKMVGDKLTGESYGIAVPKSKPE ILAKINEGLKKVKESGKYAEIYEKWFGEKPKN
Sequences:
>Translated_272_residues MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQDPSTGKYVGFDMDLIQAIGE AVGFEVEIKSMNFDGVLTSVQSGTVDAAISAISITDKRKEVMNFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIA TTGADYANELKAKGIVKEVKTFNTLPDALMELRNNGVDAVINDWPVNAYYIKQSFSDLKMVGDKLTGESYGIAVPKSKPE ILAKINEGLKKVKESGKYAEIYEKWFGEKPKN >Mature_272_residues MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQDPSTGKYVGFDMDLIQAIGE AVGFEVEIKSMNFDGVLTSVQSGTVDAAISAISITDKRKEVMNFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIA TTGADYANELKAKGIVKEVKTFNTLPDALMELRNNGVDAVINDWPVNAYYIKQSFSDLKMVGDKLTGESYGIAVPKSKPE ILAKINEGLKKVKESGKYAEIYEKWFGEKPKN
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=229, Percent_Identity=44.9781659388646, Blast_Score=197, Evalue=9e-52, Organism=Escherichia coli, GI1788228, Length=230, Percent_Identity=30.8695652173913, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787088, Length=230, Percent_Identity=33.0434782608696, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787085, Length=232, Percent_Identity=30.6034482758621, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788649, Length=231, Percent_Identity=27.7056277056277, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29802; Mature: 29802
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQ CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEC DPSTGKYVGFDMDLIQAIGEAVGFEVEIKSMNFDGVLTSVQSGTVDAAISAISITDKRKE CCCCCCEECCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHEECCHHHHH VMNFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIATTGADYANELKAKGIVKEVK HHCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH TFNTLPDALMELRNNGVDAVINDWPVNAYYIKQSFSDLKMVGDKLTGESYGIAVPKSKPE HHHHHHHHHHHHHCCCCCEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCHH ILAKINEGLKKVKESGKYAEIYEKWFGEKPKN HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQ CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEC DPSTGKYVGFDMDLIQAIGEAVGFEVEIKSMNFDGVLTSVQSGTVDAAISAISITDKRKE CCCCCCEECCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHEECCHHHHH VMNFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIATTGADYANELKAKGIVKEVK HHCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH TFNTLPDALMELRNNGVDAVINDWPVNAYYIKQSFSDLKMVGDKLTGESYGIAVPKSKPE HHHHHHHHHHHHHCCCCCEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCHH ILAKINEGLKKVKESGKYAEIYEKWFGEKPKN HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]