| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is glnP [H]
Identifier: 78044176
GI number: 78044176
Start: 438164
End: 438850
Strand: Direct
Name: glnP [H]
Synonym: CHY_0505
Alternate gene names: 78044176
Gene position: 438164-438850 (Clockwise)
Preceding gene: 78043559
Following gene: 78044744
Centisome position: 18.25
GC content: 45.71
Gene sequence:
>687_bases GTGGAACTAAAATGGTCGGTAGTAATTGAATCTTTACCTTTATTAGCAGAAGGTGCTTTAGTAACGCTTAAAATAACGGT TATTGCAGTTACGTTGGGGAGTATAATCGGTTTATTTGCGGGGCTTATGCGCATTGCGCGTAACCCCCTTTTAAAATTTA TAGCTCGGGTTTATGTGGATTTTATCCGGGGGACACCTTTATTAGTGCAAATATTTATTATTTATTACGGTTTTCCCCAG CTATGGGCAGCACTTACCGGTGGCCAGCCTCATGCTATTTCACCCTGGGCAGCGGCTATTGCCTCCACCAGTATTAACAG CGGGGCGTATGTGGCGGAGATTTTCCGGGCGGGAATCCAATCGATAGACCGGGGACAGATGGAAGCAGCCCGCTCTTTAG GGATGACTTACGGACAGGCAATGCGGTACGTTATTTTACCCCAGGCGTTTAAGCGGGTAATACCGCCACTGGGTAACGAA TTTATAGCTATGCTTAAAGATACCTCCCTGTTATCGGTGATTGGTTTTGAAGAGCTTGCGCGCCGCGGAGCTTTAATAAT TGGTTATAATGCCCGGGCTTTTGAAGTGTGGTTTGCTGTGGCAATTTTATACCTGATTATGACCCTCCTAATTTCTCAGT TGGTGAGCTATACCGAAAGGAGGCTTAAAACCGGTGATCACCATTAA
Upstream 100 bases:
>100_bases TTAACGAAGGCTTAAAGAAAGTGAAAGAATCGGGTAAGTACGCCGAAATTTACGAAAAGTGGTTTGGAGAAAAACCAAAG AACTAATTGAGGTGGCTTAA
Downstream 100 bases:
>100_bases AAACCTTCACAAAAAATTTGGCAAGCTTCACGTTTTAAAAGGCGTAACCACTCACATTAAAGAACGGGAAGTAGTGGTGA TCATAGGGCCTTCCGGTTCG
Product: glutamine ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MELKWSVVIESLPLLAEGALVTLKITVIAVTLGSIIGLFAGLMRIARNPLLKFIARVYVDFIRGTPLLVQIFIIYYGFPQ LWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRAGIQSIDRGQMEAARSLGMTYGQAMRYVILPQAFKRVIPPLGNE FIAMLKDTSLLSVIGFEELARRGALIIGYNARAFEVWFAVAILYLIMTLLISQLVSYTERRLKTGDHH
Sequences:
>Translated_228_residues MELKWSVVIESLPLLAEGALVTLKITVIAVTLGSIIGLFAGLMRIARNPLLKFIARVYVDFIRGTPLLVQIFIIYYGFPQ LWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRAGIQSIDRGQMEAARSLGMTYGQAMRYVILPQAFKRVIPPLGNE FIAMLKDTSLLSVIGFEELARRGALIIGYNARAFEVWFAVAILYLIMTLLISQLVSYTERRLKTGDHH >Mature_228_residues MELKWSVVIESLPLLAEGALVTLKITVIAVTLGSIIGLFAGLMRIARNPLLKFIARVYVDFIRGTPLLVQIFIIYYGFPQ LWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRAGIQSIDRGQMEAARSLGMTYGQAMRYVILPQAFKRVIPPLGNE FIAMLKDTSLLSVIGFEELARRGALIIGYNARAFEVWFAVAILYLIMTLLISQLVSYTERRLKTGDHH
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=44.8430493273543, Blast_Score=186, Evalue=1e-48, Organism=Escherichia coli, GI1788226, Length=228, Percent_Identity=39.4736842105263, Blast_Score=163, Evalue=9e-42, Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=36.3636363636364, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1786874, Length=243, Percent_Identity=27.9835390946502, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787086, Length=225, Percent_Identity=32, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=31.4553990610329, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=31.7535545023697, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=28.8461538461538, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI48994930, Length=165, Percent_Identity=35.1515151515151, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=24.2152466367713, Blast_Score=85, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25144; Mature: 25144
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKWSVVIESLPLLAEGALVTLKITVIAVTLGSIIGLFAGLMRIARNPLLKFIARVYVD CCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIRGTPLLVQIFIIYYGFPQLWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRAGIQ HHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH SIDRGQMEAARSLGMTYGQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGFEELA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH RRGALIIGYNARAFEVWFAVAILYLIMTLLISQLVSYTERRLKTGDHH HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MELKWSVVIESLPLLAEGALVTLKITVIAVTLGSIIGLFAGLMRIARNPLLKFIARVYVD CCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIRGTPLLVQIFIIYYGFPQLWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRAGIQ HHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH SIDRGQMEAARSLGMTYGQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGFEELA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH RRGALIIGYNARAFEVWFAVAILYLIMTLLISQLVSYTERRLKTGDHH HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]