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The map label for this gene is trg [C]

Identifier: 78043540

GI number: 78043540

Start: 1153091

End: 1154650

Strand: Direct

Name: trg [C]

Synonym: CHY_1296

Alternate gene names: 78043540

Gene position: 1153091-1154650 (Clockwise)

Preceding gene: 78044941

Following gene: 78042639

Centisome position: 48.02

GC content: 40.06

Gene sequence:

>1560_bases
ATGAAAATGCCTATTGGGATAAAAATAGGTGGTGGAGTCATACTGATACTTCTTTTATTTGTAGCAGTAGCGGTCTGGTC
ACTGCAAATTTTTGATAGTATTGTAACCGAGGTTGGGGATATCAGTACAAGGATTCAGATGGTGGATTTGGATCATAAAC
TTATCAATGCGTTTAAGGAAGCTAACCGAGATGCCGAAGCTTATTTACTATATGGTAATGAAAAGTATAAAAATGATTAT
TTACAGGATGTGGAAAATTTTATTAGCCTTATAAACAAACGGATTAATAACTGTTTAGCAGAAGACCGGCCTAAGTTTGA
TGAAGTTATAGCTAATTTTAATCAATATTACGATGTTCTTATTAACCAGGCTTTTCCATTAGCGGCAAAGGGTAAGCTCC
AGGATGCTATAAGTAAAGCACAAAGCGTTTCCAGCTATGCTGATGCTGCGGAAAAAATTTTAGAAGAACTTATTTTATCA
AATAAAGAAAATACAACTACTTCGCTTTCCTTAATTCAAAGTGAATCGCAGGAAGGACGATGGCTAATCATAATTTTAAA
TATTGTCTCCCTGATTCTTGGAATTATTATCGCATTCTGGCTTACGCGGATGATTACCAAACCCCTTTTACTTACCGTAA
AGGAAGCTCAACGGATTGCCGAAGGGGATTTAACTGGAGGGGAGCTATTAGTGAAGACCAAAGATGAACTTTCGCTACTA
GTTGAAGCTTTTAATACGATGCGTGCCAATCTACGGAATATCATTAGCACGTTAATCCAGACTGCCAAGCAGGTAAGTGA
CAATTCCCAGCAATTTGCTAACCAGGCCCAACAGACGGCAGCGGGAATTAGTGAAACTACAGCCGCAATGAGTGAGATGG
CAACTACGGTAGAACAAATTACTCAGAATACTCAGGCAGTTTCGATTAGAGCGGAGCAGGTTACAGCCCAAGCCACAGAG
GGTGCGAAAGATGTAGAACACGTAATGGAACAAATGAAAATGATTGAAGAATCTTCCAATAATGCTTCAAAAGTAATTGA
AGAACTTTATAAGACTACCGGTGAAATCACCAGGATTGTTGATTTGATTACCCAAATTGCTGATCAGACTAATCTTTTAG
CATTAAACGCCGCCATTGAAGCAGCCCGGGCGGGGGAGCATGGTCGCGGCTTTGCTGTGGTAGCAGAAGAAGTAAGAAAA
CTTGCAGAGCAATCGGCAAATGCGGCTAAAGATATATATGAACTAATTACCAACATTCAAAAAGAGACCAAGCGGGCGGT
GGAAGCAATGGCCACAGGAGTTACTGAGGTTAAAAAAGGAAGTGTCACTGTTTTTGAAGTTGGTAAGAAATTTAAAGAAA
TTGTTTCATCGATTGAGGAAGTTACCCGGCAGATTCAAGATGTTGCTTCTGCTGCCGAGGAGATATCAGCCGGGGTACAG
AATGTAGTTGCGTCTACTGAAGAACAAACTGCAGCTATCGAAGAAATTTCCGCTTCTTCCGAAGAATTAGCTTCTTTAGC
GGCTGAACTTGAAAAAATTGCTGCCAGATTTCGAGTGTAA

Upstream 100 bases:

>100_bases
TGGGAGTTTTGGGTTGAAGAGTGAATAGTTTTTAAGACAAGTGAGAAAACTTCCTGGAATTTATTCCAGGGAGTTTTCTC
TAAAAAAAGGAGGGATATTT

Downstream 100 bases:

>100_bases
TGATTTAAAAAAAGCTCTCCTGGCTTTTTTAAATGGGCTTCCAAAAAGTACTTAGATATAGCTGAATATTTTGATTAAAA
AATGGAAGCTTTAAAAAATC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MKMPIGIKIGGGVILILLLFVAVAVWSLQIFDSIVTEVGDISTRIQMVDLDHKLINAFKEANRDAEAYLLYGNEKYKNDY
LQDVENFISLINKRINNCLAEDRPKFDEVIANFNQYYDVLINQAFPLAAKGKLQDAISKAQSVSSYADAAEKILEELILS
NKENTTTSLSLIQSESQEGRWLIIILNIVSLILGIIIAFWLTRMITKPLLLTVKEAQRIAEGDLTGGELLVKTKDELSLL
VEAFNTMRANLRNIISTLIQTAKQVSDNSQQFANQAQQTAAGISETTAAMSEMATTVEQITQNTQAVSIRAEQVTAQATE
GAKDVEHVMEQMKMIEESSNNASKVIEELYKTTGEITRIVDLITQIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRK
LAEQSANAAKDIYELITNIQKETKRAVEAMATGVTEVKKGSVTVFEVGKKFKEIVSSIEEVTRQIQDVASAAEEISAGVQ
NVVASTEEQTAAIEEISASSEELASLAAELEKIAARFRV

Sequences:

>Translated_519_residues
MKMPIGIKIGGGVILILLLFVAVAVWSLQIFDSIVTEVGDISTRIQMVDLDHKLINAFKEANRDAEAYLLYGNEKYKNDY
LQDVENFISLINKRINNCLAEDRPKFDEVIANFNQYYDVLINQAFPLAAKGKLQDAISKAQSVSSYADAAEKILEELILS
NKENTTTSLSLIQSESQEGRWLIIILNIVSLILGIIIAFWLTRMITKPLLLTVKEAQRIAEGDLTGGELLVKTKDELSLL
VEAFNTMRANLRNIISTLIQTAKQVSDNSQQFANQAQQTAAGISETTAAMSEMATTVEQITQNTQAVSIRAEQVTAQATE
GAKDVEHVMEQMKMIEESSNNASKVIEELYKTTGEITRIVDLITQIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRK
LAEQSANAAKDIYELITNIQKETKRAVEAMATGVTEVKKGSVTVFEVGKKFKEIVSSIEEVTRQIQDVASAAEEISAGVQ
NVVASTEEQTAAIEEISASSEELASLAAELEKIAARFRV
>Mature_519_residues
MKMPIGIKIGGGVILILLLFVAVAVWSLQIFDSIVTEVGDISTRIQMVDLDHKLINAFKEANRDAEAYLLYGNEKYKNDY
LQDVENFISLINKRINNCLAEDRPKFDEVIANFNQYYDVLINQAFPLAAKGKLQDAISKAQSVSSYADAAEKILEELILS
NKENTTTSLSLIQSESQEGRWLIIILNIVSLILGIIIAFWLTRMITKPLLLTVKEAQRIAEGDLTGGELLVKTKDELSLL
VEAFNTMRANLRNIISTLIQTAKQVSDNSQQFANQAQQTAAGISETTAAMSEMATTVEQITQNTQAVSIRAEQVTAQATE
GAKDVEHVMEQMKMIEESSNNASKVIEELYKTTGEITRIVDLITQIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRK
LAEQSANAAKDIYELITNIQKETKRAVEAMATGVTEVKKGSVTVFEVGKKFKEIVSSIEEVTRQIQDVASAAEEISAGVQ
NVVASTEEQTAAIEEISASSEELASLAAELEKIAARFRV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=436, Percent_Identity=30.045871559633, Blast_Score=145, Evalue=8e-36,
Organism=Escherichia coli, GI2367378, Length=384, Percent_Identity=30.7291666666667, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788195, Length=363, Percent_Identity=28.9256198347107, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1788194, Length=352, Percent_Identity=32.6704545454545, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1789453, Length=323, Percent_Identity=30.9597523219814, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 56910; Mature: 56910

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPIGIKIGGGVILILLLFVAVAVWSLQIFDSIVTEVGDISTRIQMVDLDHKLINAFKE
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
ANRDAEAYLLYGNEKYKNDYLQDVENFISLINKRINNCLAEDRPKFDEVIANFNQYYDVL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
INQAFPLAAKGKLQDAISKAQSVSSYADAAEKILEELILSNKENTTTSLSLIQSESQEGR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
WLIIILNIVSLILGIIIAFWLTRMITKPLLLTVKEAQRIAEGDLTGGELLVKTKDELSLL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHH
VEAFNTMRANLRNIISTLIQTAKQVSDNSQQFANQAQQTAAGISETTAAMSEMATTVEQI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
TQNTQAVSIRAEQVTAQATEGAKDVEHVMEQMKMIEESSNNASKVIEELYKTTGEITRIV
HCCCHHHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DLITQIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEQSANAAKDIYELITNIQ
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
KETKRAVEAMATGVTEVKKGSVTVFEVGKKFKEIVSSIEEVTRQIQDVASAAEEISAGVQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVVASTEEQTAAIEEISASSEELASLAAELEKIAARFRV
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMPIGIKIGGGVILILLLFVAVAVWSLQIFDSIVTEVGDISTRIQMVDLDHKLINAFKE
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
ANRDAEAYLLYGNEKYKNDYLQDVENFISLINKRINNCLAEDRPKFDEVIANFNQYYDVL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
INQAFPLAAKGKLQDAISKAQSVSSYADAAEKILEELILSNKENTTTSLSLIQSESQEGR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
WLIIILNIVSLILGIIIAFWLTRMITKPLLLTVKEAQRIAEGDLTGGELLVKTKDELSLL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHH
VEAFNTMRANLRNIISTLIQTAKQVSDNSQQFANQAQQTAAGISETTAAMSEMATTVEQI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
TQNTQAVSIRAEQVTAQATEGAKDVEHVMEQMKMIEESSNNASKVIEELYKTTGEITRIV
HCCCHHHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DLITQIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEQSANAAKDIYELITNIQ
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
KETKRAVEAMATGVTEVKKGSVTVFEVGKKFKEIVSSIEEVTRQIQDVASAAEEISAGVQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVVASTEEQTAAIEEISASSEELASLAAELEKIAARFRV
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA